G144584


Basic Information

Item Value
gene id G144584
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 26750835 ~ 26754442 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU195623
TCAGAATCCCAGCACTATCCAGCAGCACGGTGGGCACATATAAGTAATATcctgactttaaaataataaaaaggtatcagattaataaaacaaaaattatgtaCATCTGGAAACTGATAAACAAAATAACGTCTGTCATCACATGCCAAGATTATAGTCCCAATACCAGCACTGGTTATACAAGAAACAGGCAGGTAATAACAGTGGAAACATGAAGCTTTTAGATGGCCATAAAACAACATAGTTAAGGTAAATAccaataataaactgtaaacaaacatgATGTTCACGCAAAACTTTCACATCCAATGGAAATCTTTATAATACTTCATGTTAGCCTTCTCTATGGCTTTCATCACAACTAGCAATAAGAACATACATCTCATTAATAGTCAACATACTGAATAGGAAAAATGAGTGTTTTAATGGAATGTTTTGTGATTCATCAGCATTAAAAAAGACCTTTTGCATTATAATGTGCTCTGTGTTTTGTAACAAGTGGGTTCAGGTCACTCTTGTGGTCACATGGGGAAGTATTTAACAGCTGTTCTCTTCTCATGGAAGGCATTGCAATCTGTTATAACACTTATTCACAAAAAGCTCCACTTGCAAAACATGTAGACAGTAAATCCAGACGTTCATTCATGCTCGCCATTAGCAGCCAGAATCAGAGAGAGCACACAAGAGCCTTGCTCTGCCAGGGTTGGATTGGTGGCATTTCCTCCCATCACATCATTCTAGcatgatgttggtcagcacaggctcctgttagctgatgtatcagagctggggtgCTGCGCTTTCTTTAGAGTGTGCTGGCTCCTCGATGATGCTGCATCAgtggcagttcaaaaagaggtggtggctgacttcacatcggaggaggcatgtgctaatcttaCCACTTCTAGTGTCGTGGGCATAAAACAGCTAATGTTTCCATTGTTTAGTCCAAGGTGATGTAGGTGGTGTATGGAGTTCTATGGAAGTATttggcaaagaaaaaaatatatagttaacATTGATTACTGACTGTTTGTAAAAGTAGTACACTGTGTCCCAGGGTTCTCCTACTATACAAAATGTTCCCAAATTACACAAAGTGCCTGATTTGGGACATAAGAAATCAGGATGTAGAGTGTCCATGTCCAGATAATGGACCTTGTTCCCAACAGTAACAAGGTATGTTCCAGTGGGTGTGGTGGCTGTCCACATTTTGGCATTTAGTCCCGTATGCACTAATAGTGAAGCCTTTGGCAACAACTACAGTTTCCTTAAGATACAGACTAACCAGAGagaatacttttttcttttgtacattgttttttttcactttgttATCTGACTGTACCTTACTGTGCCCACATTTGGAGCGGCACAGTCTAGGGAACTGTGGTGGGGTTATTTGCCTAACCCAAGGCAACAACCAGGAATACTCAGTTCTGGGGTTTAAACCAATTACCTTCTGGTTGCTGTTTTACAAACTGCTTAATCGAGTGGAGTTTCTTCTTGTAATCTAGATTGAGCAGCTATAAGTAAAATagcatttaaacaaaacagGCACAGCCAACTAAACCAATTCTCCAGGTATGGTAGCATTGCAtctaaaatgaatgcatttataccTGATGCCCTGGAGGATCCGTATACACCCAAACATTCTTTTATAACATCAAAATCCACCTTAGGGTGTCACTAAAGAAAGGCCATAAAACGTGCATGGCTTTTTGTTCCAGTTGCTGAATCTCCAGTTTTGCCACTATTCAAAGTCTCCAAAGTAttcaaacacttttaaaatttaTTACCAGTCTTCTATGGATCAGTGATGGTATCCAGTACAAAGCTCTGAGCTGTAGAATGGGAGGTCCTACACTATCTGAGGCTGATGATGATGCATGATACCATTGTGGACAGGGTGTAACCCGTTGGTCTCTGGGCCGAGCAGGATGTTGTCGGGTTTCGAATTAGGCCACAGTTTAACACTGGTTTGCTCAAAGGGACTGGACCGGGCCTCTGATGTCTGAGAGCTCACTGTGGCGCTGGAAATGTTGTCCAGCACATCCCCCTCATATCTTGCTCCCAGGATCACACCAAAAGCTTGTCCTGGATTCCTCTGTGCCGCATCAGTAAGTGGCGGGTTGTTGGGTGAACTCATGGGTGAATGGTGTCCCCTACTGCCTGTTCTACTGCCTGCTCTGCTGCCTGCCCTGCTGCCCCCTCCTGACTGTGGTCTGCCCTCTGCTGGTAGAATGGCACTGCCGTTTCGAGACCTGACAGGTTCAGCAATTtggagaggagggagaaagtGGCTTTCCGAATGCACCAGTGACATATTGCTGCTCTTCACAAAAGCCTCCACTTTCAGTCGAGACAactctctctccccttctctctctctttccattgcTCGCTCCCTTCCTCGCCTGGATGTGTTGTAAATGACCGGACGACCCAAGGTGTCCACAGCCCCTCCTAGAGTGGAACGACTGTCCCTAGAACGAGGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU195623 True 2505 TUCP 0.43 2 26750835 26754442

Neighbor

gene id symbol gene type direction distance location
rpl34 rpl34,LOC107566275,LOC107681344,LOC107573163 coding upstream 143644 26602015 ~ 26607191 (+)
etnppl etnppl coding upstream 283015 26448792 ~ 26467820 (+)
col25a1 col25a1,LOC102793499 coding upstream 305857 26116456 ~ 26444978 (+)
saxo1 NA coding upstream 946450 25801919 ~ 25804385 (+)
LOC103042207 NA coding upstream 1074463 25673233 ~ 25676372 (+)
focad focad,LOC101469292,LOC104964325 coding downstream 180641 26935083 ~ 27035079 (+)
ndufs2 ndufs2 coding downstream 346382 27100824 ~ 27115844 (+)
LOC111194356 NA coding downstream 493909 27248351 ~ 27251123 (+)
LOC111194351 NA coding downstream 547424 27301866 ~ 27305675 (+)
adgra3 adgra3,LOC107691845 coding downstream 1276315 28030757 ~ 28084025 (+)
G144573 NA non-coding upstream 29678 26720432 ~ 26721157 (+)
G144553 NA non-coding upstream 142151 26608211 ~ 26608684 (+)
G144556 NA non-coding upstream 143050 26607344 ~ 26607785 (+)
G144531 gpr78,LOC103025717,LOC108267410,LOC107733618,LOC107554869,LOC103387074 non-coding upstream 223857 26525773 ~ 26526978 (+)
G144512 NA non-coding upstream 253693 26496785 ~ 26497142 (+)
G144608 trmt10a non-coding downstream 28801 26783243 ~ 26785764 (+)
G144611 NA non-coding downstream 44474 26798916 ~ 26802021 (+)
G144617 NA non-coding downstream 62593 26817035 ~ 26817327 (+)
G144642 NA non-coding downstream 328888 27083330 ~ 27285363 (+)
LOC111194210 NA non-coding downstream 497916 27252358 ~ 27255652 (+)
G144372 NA other upstream 961993 25786737 ~ 25788842 (+)
G144333 NA other upstream 1096585 25653006 ~ 25654250 (+)
G144290 NA other upstream 1276141 25472123 ~ 25474694 (+)
G144270 peli3,LOC103027529,LOC108440836,LOC108267165,LOC107660729,LOC107731914,LOC107679255 other upstream 1372070 25375998 ~ 25378765 (+)
G144146 men1,LOC107660721 other upstream 1746664 24998773 ~ 25004171 (+)
G144613 NA other downstream 53274 26807716 ~ 26812127 (+)
G144671 NA other downstream 452300 27206742 ~ 27208591 (+)
LOC103038323 tspan5a,LOC108437089,LOC103038323,LOC107740922,LOC107561515,LOC107691852,LOC107659128 other downstream 1871602 28626044 ~ 28658921 (+)
LOC103041452 ap1s1,LOC107666294,LOC105921790,LOC107593725,LOC103148860,LOC108443977 other downstream 2401283 29155725 ~ 29170570 (+)
LOC111194370 LOC108434654 other downstream 2674583 29429025 ~ 29432026 (+)

Expression


Co-expression Network