G144866


Basic Information

Item Value
gene id G144866
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 27969493 ~ 27970505 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU195968
accttaacccttaatcaaccataaaatcaaaccctacacctaaccctaaccctaacccttaatcaaccataaaatcaaaccctacacctaaccctaaccttaacccttaatcaaccataaaatcaaaccctacacctaaccctaaccttaacccttaatcaaccataaaatcaaaccctacacctaaccctaaccctaacccttaatcaaccataaaatcaaaccctacacctaaccctaaccttaacccttaatcaacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU195968 True 260 lncRNA 0.38 2 27969493 27970505

Neighbor

gene id symbol gene type direction distance location
LOC111194351 NA coding upstream 663818 27301866 ~ 27305675 (+)
LOC111194356 NA coding upstream 718370 27248351 ~ 27251123 (+)
ndufs2 ndufs2 coding upstream 853649 27100824 ~ 27115844 (+)
focad focad,LOC101469292,LOC104964325 coding upstream 934414 26935083 ~ 27035079 (+)
rpl34 rpl34,LOC107566275,LOC107681344,LOC107573163 coding upstream 1362302 26602015 ~ 26607191 (+)
adgra3 adgra3,LOC107691845 coding downstream 60252 28030757 ~ 28084025 (+)
LOC103045778 kcnip4,LOC100711851,LOC102215477 coding downstream 328991 28299496 ~ 28368962 (+)
LOC103035875 LOC108437090 coding downstream 440808 28411313 ~ 28445089 (+)
LOC103035569 NA coding downstream 487399 28457904 ~ 28475027 (+)
LOC103035264 LOC108437087 coding downstream 526135 28496640 ~ 28564802 (+)
G144858 NA non-coding upstream 58366 27910696 ~ 27911127 (+)
G144856 NA non-coding upstream 81943 27857807 ~ 27887550 (+)
G144845 NA non-coding upstream 218049 27751238 ~ 27751444 (+)
G144833 NA non-coding upstream 311643 27655183 ~ 27657850 (+)
LOC111194353 NA non-coding upstream 529441 27438406 ~ 27440052 (+)
G144899 NA non-coding downstream 311963 28282468 ~ 28374984 (+)
G144948 NA non-coding downstream 404559 28375064 ~ 28377056 (+)
G144953 sec24d,LOC103036498 non-coding downstream 411187 28381692 ~ 28384123 (+)
G144969 frem1 non-coding downstream 597888 28568393 ~ 28570000 (+)
G145007 NA non-coding downstream 804192 28774697 ~ 28775779 (+)
G144671 NA other upstream 760902 27206742 ~ 27208591 (+)
G144613 NA other upstream 1157366 26807716 ~ 26812127 (+)
G144584 NA other upstream 1215051 26750835 ~ 26754442 (+)
G144372 NA other upstream 2180651 25786737 ~ 25788842 (+)
G144333 NA other upstream 2315243 25653006 ~ 25654250 (+)
LOC103038323 tspan5a,LOC108437089,LOC103038323,LOC107740922,LOC107561515,LOC107691852,LOC107659128 other downstream 655539 28626044 ~ 28658921 (+)
LOC103041452 ap1s1,LOC107666294,LOC105921790,LOC107593725,LOC103148860,LOC108443977 other downstream 1185220 29155725 ~ 29170570 (+)
LOC111194370 LOC108434654 other downstream 1458520 29429025 ~ 29432026 (+)
G145438 NA other downstream 2207699 30178204 ~ 30178724 (+)
G145457 cyp26b1,LOC103033177,LOC108434641,LOC107750587,LOC107691896,LOC108267534,LOC107588193 other downstream 2358953 30329458 ~ 30331665 (+)

Expression


Co-expression Network