G41482


Basic Information

Item Value
gene id G41482
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 2632214 ~ 2632830 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU47090
GTTAGAGCAGATGTTACAACATAAATGGATTAGGAATGATCTAGATTGAAGAAGTTCAGGAGATTCACTCGATCAGGGATTTCAGGAAATAACTTGAGCTCGAGACTTGACACGAAGCCTGAAGTCCAACTCCAACCTGACTGGGAACTCAGAGCCTGTCCACGTCTGAACAAGAACACGAGAGACTGCAAGACTGGGAAGAAGTCATCATGTCATCACAGCCACATTTGCTTCGTTTTAAAAATTATTTTGCTTTGTTGTTTTTTTTAAAGTCAAGTCAAGACAAGTCATCTTTATTTATATAGCACCTTATATATGACCAATCTGTATATATGACCCCTTTGAATAAATGTTTTTATAGTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47090 True 365 lncRNA 0.35 2 2632214 2632830

Neighbor

gene id symbol gene type direction distance location
CI01000006_02616480_02616828 NA coding upstream 15375 2616480 ~ 2616839 (+)
CI01000006_02613864_02614742 NA coding upstream 17454 2613754 ~ 2614760 (+)
CI01000006_02531899_02588907 NRG2A coding upstream 42451 2531816 ~ 2589763 (+)
CI01000006_02490349_02491048 NA coding upstream 141096 2490349 ~ 2491118 (+)
CI01000006_02396895_02399927 CXXC5A, CXXC5 coding upstream 232263 2396468 ~ 2399951 (+)
CI01000006_02665949_02677083 RASGRP2 coding downstream 33119 2665949 ~ 2677215 (+)
CI01000006_02774064_02933983 NRXN2A coding downstream 141234 2774064 ~ 2933983 (+)
CI01000006_03016090_03016706 NA coding downstream 382307 3015137 ~ 3017314 (+)
CI01000006_03102358_03152576 NRXN2A coding downstream 469528 3102358 ~ 3152869 (+)
CI01000006_03164803_03183473 PCNX3 coding downstream 531359 3164189 ~ 3183719 (+)
G41423 NA non-coding upstream 6028 2610231 ~ 2626186 (+)
G41461 NA non-coding upstream 186280 2445724 ~ 2445934 (+)
G41457 NA non-coding upstream 189238 2442612 ~ 2442976 (+)
G41453 NA non-coding upstream 194762 2437230 ~ 2437452 (+)
G41452 NA non-coding upstream 195585 2436404 ~ 2436629 (+)
G41433 NA non-coding downstream 1273 2634103 ~ 2644385 (+)
G41488 NA non-coding downstream 67777 2700607 ~ 2700826 (+)
G41494 NA non-coding downstream 76696 2709526 ~ 2710015 (+)
G41570 NA non-coding downstream 104306 2737136 ~ 2744797 (+)
G41547 NA non-coding downstream 343864 2976694 ~ 3053920 (+)
G41170 NA other upstream 936393 1692065 ~ 1695821 (+)
G40768 NA other upstream 2139188 488407 ~ 493026 (+)
G40767 NA other upstream 2148879 360009 ~ 484185 (+)
G40772 NA other upstream 2153020 475465 ~ 479194 (+)
G41424 NA other downstream 12832 2645662 ~ 2660570 (+)
G41591 NA other downstream 203337 2836167 ~ 2839421 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other downstream 1096400 3734554 ~ 3736035 (+)
G41996 NA other downstream 2484376 5117206 ~ 5124149 (+)
G43896 NA other downstream 3137259 5770089 ~ 5771775 (+)

Expression


Co-expression Network