G145141


Basic Information

Item Value
gene id G145141
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 28938993 ~ 28944061 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU196344
CTGAATCACTGCCACAGTGTTCCACTTGTTTTCATCTTCGGCAGAAAAAGAGCAGGGCAATGGATTCAGGCGACTGGAAAAATGTGTCCCAAACCACATCCTTGACACTTTTAGTGGAGAACGTAGCTACAAAGTGTGCTACACATTCTGTACCATGGAGTAAGCCGATGCTCAGTAACAAGAAGCCTGCTTTAAAGCCCATGCAAGCCTTGGATGAATGTGTTCAGCTTATCAAAGATATGGCTAAGGAGCTCGAGGACCTTGGGGACCCGAGCAAGGTCAGAAAAAGAAGTTTAAAGGAAAGAGATAAGGATGTTCTGGGTAAATCAGATAAGCCCACCAGTATGGATTACAGCAAGTCTCTCATACAGTCTTGGGCCAAAGAAGTGAACAGCCTCAACCTGTCCAGCAGATTGAAAAAAACGATTCAGGATGTGCCGCTTAGTGTGAAGGACAGCGACAGGATCCTGGAGTGGGCGAGAGAATTAAAGAGTGCCTCAGAGAGTTTGGGTCTGAAAGATGAGGATTTAAAGCAGATTCTTAGTCATCACCGCACAAAGCAGACAAAACTCAATGAaattcttcctttcctggaatTTGTGGTTTGGTCTCTTGTCTCACAGCAGTCTGAGGAGGACATTTCAAACATATGGTTGTCAGTCAAGCAGAGACAATGGAAGACAGGCAGCCAGAAATACATCCCGCGTTCAGtttggcAGTGGATCCAGAGTGCATCAgCTGATGTTCAGTTAGACCCCAGCTCCTGTCACCCCTGGTTGTGTG
>TU196345
CTGATCTTAAGTGGCTtttatgtgtgcatgtgtctgttTTACACAGAGTTTGGGTCTGAAAGATGAGGATTTAAAGCAGATTCTTAGTCATCACCGCACAAAGCAGACAAAACTCAATGAaattcttcctttcctggaatTTGTGGTTTGGTCTCTTGTCTCACAGCAGTCTGAGGAGGACATTTCAAACATATGGTTGTCAGTCAAGCAGAGACAATGGAAGACAGGCAGCCAGAAATACATCCCGCGTTCAGtttggcAGTGGATCCAGAGTGCATCAgCTGATGTTCAGTTAGACCCCAGCTCCTGTCACCCCTGGTTGTGTG

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04976 Bile secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU196344 True 783 TUCP 0.46 9 28938993 28944061
TU196345 False 326 TUCP 0.45 5 28938993 28941212

Neighbor

gene id symbol gene type direction distance location
LOC111194357 NA coding downstream 4099 28930649 ~ 28934894 (-)
mpdu1 mpdu1,mpdu1b,LOC107750562,LOC107754705,LOC107687039,LOC107593662 coding downstream 10092 28922865 ~ 28928901 (-)
tnk1 LOC108443979 coding downstream 67774 28847847 ~ 28871219 (-)
elp5 NA coding downstream 132355 28801839 ~ 28806638 (-)
ctdnep1 ctdnep1a,dulda,LOC108413724,LOC107659132,LOC107672750,LOC107747382,LOC107744461,LOC107599947 coding downstream 140605 28774668 ~ 28798388 (-)
LOC111194358 LOC108267896,LOC108443962,LOC107663253,LOC107561795 coding upstream 139945 29084006 ~ 29090325 (-)
trnat-agu_3 NA coding upstream 166741 29110802 ~ 29110875 (-)
LOC103041139 LOC108443978 coding upstream 256177 29200238 ~ 29207306 (-)
LOC103040840 LOC103040536 coding upstream 316786 29260847 ~ 29263989 (-)
LOC103040536 LOC103040536 coding upstream 322041 29266102 ~ 29270891 (-)
G145138 LOC108443970 non-coding downstream 30890 28904684 ~ 28908103 (-)
G145127 NA non-coding downstream 38098 28842559 ~ 28900895 (-)
G145133 senp3b,LOC108267653,LOC108443968,LOC107593615,LOC107754702,LOC107687035 non-coding downstream 53933 28882660 ~ 28885060 (-)
G145090 slc1a1,LOC106943501,LOC106526470 non-coding downstream 113675 28755832 ~ 28825318 (-)
G145096 NA non-coding downstream 142369 28794135 ~ 28796624 (-)
G145250 ap1s1,LOC107666294,LOC105921790,LOC103148860 non-coding upstream 149771 29093832 ~ 29169919 (-)
G145285 NA non-coding upstream 396411 29340472 ~ 29343893 (-)
G145287 NA non-coding upstream 409581 29353642 ~ 29379789 (-)
LOC111194369 NA non-coding upstream 458005 29402066 ~ 29411991 (-)
G145345 NA non-coding upstream 553394 29497455 ~ 29505220 (-)
G145135 eif4a1,if4a1,eif4a1a,eif4a1b,LOC108443969,LOC107561738,LOC107687036,LOC107704251,LOC107593628,LOC105895537,LOC107098142,LOC108415734,LOC105007919,LOC106560692,LOC106602896 other downstream 45995 28886240 ~ 28892998 (-)
G145101 NA other downstream 122859 28812741 ~ 28816134 (-)
LOC103030802 LOC103030802 other downstream 1863262 27055327 ~ 27075731 (-)
G144410 NA other downstream 3262674 25673184 ~ 25676319 (-)
LOC103041383 cj011,LOC103041383,LOC108436197,LOC108267333,LOC105908822,LOC106577738,LOC107752978,LOC107559952,LOC100331330 other downstream 3267453 25666280 ~ 25671540 (-)
LOC103030652 NA other upstream 1700334 30644395 ~ 30650306 (-)
LOC103041855 LOC108434590,LOC106577649,LOC105907155,LOC108267266,LOC107707052,LOC107738084,LOC107595290 other upstream 2279386 31223447 ~ 31227578 (-)
G145899 NA other upstream 2539882 31483943 ~ 31486070 (-)
LOC103036756 LOC103036756,LOC108434598 other upstream 2555855 31499916 ~ 31502661 (-)
LOC103035326 sall2 other upstream 2606468 31550529 ~ 31558461 (-)

Expression


Co-expression Network