G41570


Basic Information

Item Value
gene id G41570
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 2737136 ~ 2744797 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU47190
TATATGGACTACTTTTATGACATTTTTGATAAACTGATAAATGTTTCATTTTATGGTTACAAAAAAAAGAGAAGAAAATTCAAACATGATAAAATAAATTGCTACAAGATGGCACAAGATAAGAAAGAATGAAAGAACAAATTAGATGAAATACATTTTCCTTTTGACATCTACTGTAGACACATCTATATAGTTTGAGTTAAAGTAAATAAGTGCTCTTAGTAATAGAAAAGGGACATTGGGATGCCAGTTAGATAGTCCTTGAAAAACTCTGGTTGGAGCTCAGGAAGTTATATAACAATCTTACTCTGACTTCTGCTGTTCAAGGGAAGTCAACATGAAATAAAATTTACCTTGTCTATTTTCTAAATGCATGTTATAGATCTTATTGTGAATTATTTATCCATGCAGGTTTTATTGATTTTATTTGACTTTATAATTTAATCAAAATGTCATAACTTGATCTTCCAGTGAAACGACTGACTTCACTCTGTTGACGTGTGTTCAGACTTCTCCAGTCATTTAGTCCACTTAAACCCTGTCCCCCCATTTTTTATTTATTTATTTATTTTTTTTACAATCGACTGCAAGATCACATTCAGGTATACCTCTATCCAATAAACAAACAATGGACAAAACCAAGTCCCCATCCTACATTTCTTTCCCCCCGTCTGTTTTACGACACAACATGGAATGAAAGGTTTGTCGCTACAGTATGTCCATTTCATTGCAACTTTAAATCTATGCCTTAAAGGGTTAGTTCACCCAAAAATGAAAATATCATTTATTACTCACCCTCATGCCGTTCCACACCCGTAAGACCTTCGTTCATCTTCGGAACACAAATTAAGATATTTTTGATGAAAAAGTTTTTTTTTTTTTATCTTCAATAGAAAGCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47190 True 901 lncRNA 0.32 2 2737136 2744797

Neighbor

gene id symbol gene type direction distance location
CI01000006_02665949_02677083 RASGRP2 coding upstream 59921 2665949 ~ 2677215 (+)
CI01000006_02616480_02616828 NA coding upstream 120297 2616480 ~ 2616839 (+)
CI01000006_02613864_02614742 NA coding upstream 122376 2613754 ~ 2614760 (+)
CI01000006_02531899_02588907 NRG2A coding upstream 147373 2531816 ~ 2589763 (+)
CI01000006_02490349_02491048 NA coding upstream 246018 2490349 ~ 2491118 (+)
CI01000006_02774064_02933983 NRXN2A coding downstream 29267 2774064 ~ 2933983 (+)
CI01000006_03016090_03016706 NA coding downstream 270340 3015137 ~ 3017314 (+)
CI01000006_03102358_03152576 NRXN2A coding downstream 357561 3102358 ~ 3152869 (+)
CI01000006_03164803_03183473 PCNX3 coding downstream 419392 3164189 ~ 3183719 (+)
CI01000006_03232003_03242938 NA coding downstream 487206 3232003 ~ 3243362 (+)
G41494 NA non-coding upstream 27121 2709526 ~ 2710015 (+)
G41488 NA non-coding upstream 36310 2700607 ~ 2700826 (+)
G41433 NA non-coding upstream 92751 2634103 ~ 2644385 (+)
G41482 NA non-coding upstream 104306 2632214 ~ 2632830 (+)
G41423 NA non-coding upstream 110950 2610231 ~ 2626186 (+)
G41547 NA non-coding downstream 231897 2976694 ~ 3053920 (+)
G41554 NA non-coding downstream 250973 2995770 ~ 3006315 (+)
G41538 NA non-coding downstream 277301 3022098 ~ 3032710 (+)
G41605 NA non-coding downstream 453039 3197836 ~ 3198286 (+)
G41606 NA non-coding downstream 453765 3198562 ~ 3198765 (+)
G41424 NA other upstream 76566 2645662 ~ 2660570 (+)
G41170 NA other upstream 1041315 1692065 ~ 1695821 (+)
G40768 NA other upstream 2244110 488407 ~ 493026 (+)
G40767 NA other upstream 2253801 360009 ~ 484185 (+)
G40772 NA other upstream 2257942 475465 ~ 479194 (+)
G41591 NA other downstream 91370 2836167 ~ 2839421 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other downstream 984433 3734554 ~ 3736035 (+)
G41996 NA other downstream 2372409 5117206 ~ 5124149 (+)
G43896 NA other downstream 3025292 5770089 ~ 5771775 (+)
CI01000006_06104927_06109730 NA other downstream 3363687 6104927 ~ 6109820 (+)

Expression


Co-expression Network