G41591


Basic Information

Item Value
gene id G41591
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 2836167 ~ 2839421 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU47211
CCCCAAAGCGTCATCATTGGACGCAGCGGTATTCCCTCGAAAGGGAACTTGATAGTATAGTTGGCAATATATAAGATGATGATGTTCAATACTAGATCCTTTATGGAAACATATTGCGTACAGCATTCGTCCAATCAATGACACTGATATTGCAAATAGTCAAAAAAAAGTTAACCCAGGGTTTAGGAATGTACATTGTGAAATGGCAGCGTACGAATACACAGGATTAATTGTTAACCCCAGGTAAATTTATGAGTAGTGTGAAACATGAAAAAAAAAAAGATAACCCAGGATTCAATTTATAATGACCCAGGGTTAACTATTTCAAGTGTGAAAAGCCCTTACATGACAATCTTTCATATGGAAATACATTTCTGAACTTACTCTATAAACAATACAAAGAACCCTGTCAGTTAATTACTATAAATTTAAAGGTAAAAAATTAACAACAGTCCAAATTCAGTTACTATTTACTTTAGGATGTAATGATCAACATTCAAATAATAGTTGTATACAAACATTTAAATTGTGCAGTGAAGCATTTACATTGCACATTTTTCTATCTAACTATTGAACTATGGACATTGAATAGCCTGAGGTAAATGTAGCATTTCATAACACATTGTTTGCAAGTTGTTTTATTGATATCTTTCCGTGGTTGAAACACAGAGCGATTACATAAGACATGATACATTTCAGTACGTTGTACTGTTTCTTTCAACATACTGTACCTTCAAATGTTAATTCATGTTTATTTAGTGCTGTAACTAATAGCAGAAGAAGAGATGATTGGTTCATATGCAGCTAAAGGGATCTGTCACATCACATTAAAGAGTGTCAAAAGTATTTATAGTTTGAATTTCATGATAAAATTGGCAGAATTTGAAAGCTGAGACTTTTTTCATATCAGAATAACAAAGCACAAAGCTTATTGTGATTATTGGATGGGATGCGAGCTACAAATTATGTTTAGTGAAGTTTTGTTCATGCATCAACAGAAAACAGCATATAGTGAAATTGATTCTGGAAGTTATGAATTGATATTGGTTCATCAAAATGAAGTTGATTAATCAATATTGTCAACCCCCGGCTTATTAGAAATAGAATTTGACTTGACTACAGTGGTATATTTATACAACAGAGTATACAATAGAATGTACAGTGCTCAGCGTAAATGAGTACACCCCCTTTGAAAAGTAACATTTTAAACAATATCTCAATGAACACAAAAACAATTTCCAAAATGTTGACAAGACTAAGTTTTATATAACATCTGTTTAACTTATAACATGAAAGTAAGGTTAATAATATAACTTAGAGAACAAAATTTTCAGTTTTACTCAAATTAGGGTGATGCAAAAATGAGTACACCCCACTGAAAGTCTCTGGAGCAAAGCTAAATTTTAGACTACAAATGTCTAATTTAACAAGAATTCAACCACAGGTGAGTCTAATTATTCATTACACAGGTGTCCAGCAGACAGTTGACTATAAAAAGGTGTTAAAACCCCTTCCCATTTCATGTTGTCAGCAATGGCACCACACTGAAGAGAAATGTCACAAGACCCGAGAAAGAAAATAATTTCTTTACACCAGAAAGGTGAAGGCTACAAGAAGATCAACAAAGCTTTACTTATCAGTCAGAATACTGTAGCAAAAGTGGTACAAAAATTTAAAAAAGATGGAACTGCAACCATCTCACAGAGACGTCCAGGTCGTCCACGAAAGTTAACACCTCGACAGGAGCGTCTTCTGATGAGAAGTGTTGAAGAAAATCGGCATGCAAGTTCACTGCAGTTATCTAAAGTAGTAGAAAGCCAAACTGGGCTATTTCCCATGACACAATACGGCGTACACTGCAGAGGAATGGCATGCATGAGTTTGCCAGGGCCCATGCTGACAAAGATGAAGACTACTGGGACTCTATACTCTGGAGTGATGAGACCAAGATAAATGTTTTTGGAACTGATGGCTTCAAAACTGTATGGAATACAAAGCAAAATGCATGGTGCCTACAGTGAAACATGGTGGTGGCAGTGTCCTTTTGTGGGGCTGCATGAGTGCTGCTGGTGTCGGGGAGCTGCATTTCATTGATGGCATCATGAATTCACAGATGTACTGCTCTATACTGAAGGAGAAGATGCTACCATCACTCCGTGCCCTTGGTCGTCGTGCACTTTTCCAACATGACAATGATCCTAAACACATTTCTGAAGAAGAACAGGGTGAAAGTGATTCAGTGGCTAAGTATGTCTCCTGATCTGAACCCAATCGAACACCTATGGGGAATTCTGAAGAGACAAGTTGAGCATCACTCTCCATCCAGCATCCAGTCTCTAAAAGAGGTCATTCCTGAAGAATGGAAAAAGATAGATGTTGCAAAATGTCACCAACTTTTTTCATTCCATGCTGTCATTAAAAATCATGGAGGCCATACAAAGTACTAGATGTAGTAGTTTTTGTTGTGGGGTGTATTCATTTTTGCATCACCCTAATTTGAGTAAAAATGAAAAACAGATGTTCTATTAAACTTAATCTTGTCAACATTTTGGAAATTGTTTTTGTATTCATTGAAATATTGTTTAAAATGTTACTTTTCAAAGGGGGTGTACTCATTCACGCTGAGCACTGTATATGTAAGCGCACACTACAGTGCGTGTTTGTACCTGGTCTTATTTTCTGTACATTTGCACATTTTTACATTGAATGTCATTAGATTTTCAACCAAAACCTATAAATGCATAAAAGTGTTTCTTAATGAGAAAAAAACAAACAAACAAAAAATAAAAATTACACGCACATTTTATGTATTTATATAACACCCAGTATACCTGTGGGGAGAAAACAGAATGCCCTCTTAGTCAATGACTAGTTACACACCCATTATTAACAATAACTGCAACCAAACAATTCCCATTTGAATGTTTCACACTGTATATGATTTTTGACCTACCTCTCCTTGCAGAACTGCATAATGTCAGTGACATTTGAAAAATACCTTTTCACTCCTGAAGATTGCATAATTGAAACCTTGAACACCAAAAAGCGTACACAGGTGCACAATTTTGGTCCATTTTTACCAGCAGACTCTATCAATATATTGCTATGATCAACAACAAAATCTGATTTCATACAATGGACAATGTTAAAAAATGTCCGCAAAAAATTTCTGAATTTCAGACGTGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47211 True 3188 TUCP 0.37 2 2836167 2839421

Neighbor

gene id symbol gene type direction distance location
CI01000006_02665949_02677083 RASGRP2 coding upstream 158952 2665949 ~ 2677215 (+)
CI01000006_02616480_02616828 NA coding upstream 219328 2616480 ~ 2616839 (+)
CI01000006_02613864_02614742 NA coding upstream 221407 2613754 ~ 2614760 (+)
CI01000006_02531899_02588907 NRG2A coding upstream 246404 2531816 ~ 2589763 (+)
CI01000006_02490349_02491048 NA coding upstream 345049 2490349 ~ 2491118 (+)
CI01000006_03016090_03016706 NA coding downstream 175716 3015137 ~ 3017314 (+)
CI01000006_03102358_03152576 NRXN2A coding downstream 262937 3102358 ~ 3152869 (+)
CI01000006_03164803_03183473 PCNX3 coding downstream 324768 3164189 ~ 3183719 (+)
CI01000006_03232003_03242938 NA coding downstream 392582 3232003 ~ 3243362 (+)
CI01000006_03294091_03298089 SLC29A2 coding downstream 454567 3293988 ~ 3298671 (+)
G41570 NA non-coding upstream 91370 2737136 ~ 2744797 (+)
G41494 NA non-coding upstream 126152 2709526 ~ 2710015 (+)
G41488 NA non-coding upstream 135341 2700607 ~ 2700826 (+)
G41433 NA non-coding upstream 191782 2634103 ~ 2644385 (+)
G41482 NA non-coding upstream 203337 2632214 ~ 2632830 (+)
G41547 NA non-coding downstream 137273 2976694 ~ 3053920 (+)
G41554 NA non-coding downstream 156349 2995770 ~ 3006315 (+)
G41538 NA non-coding downstream 182677 3022098 ~ 3032710 (+)
G41605 NA non-coding downstream 358415 3197836 ~ 3198286 (+)
G41606 NA non-coding downstream 359141 3198562 ~ 3198765 (+)
G41424 NA other upstream 175597 2645662 ~ 2660570 (+)
G41170 NA other upstream 1140346 1692065 ~ 1695821 (+)
G40768 NA other upstream 2343141 488407 ~ 493026 (+)
G40767 NA other upstream 2352832 360009 ~ 484185 (+)
G40772 NA other upstream 2356973 475465 ~ 479194 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other downstream 889809 3734554 ~ 3736035 (+)
G41996 NA other downstream 2277785 5117206 ~ 5124149 (+)
G43896 NA other downstream 2930668 5770089 ~ 5771775 (+)
CI01000006_06104927_06109730 NA other downstream 3269063 6104927 ~ 6109820 (+)
CI01000006_06122278_06122736 NA other downstream 3282614 6122035 ~ 6122751 (+)

Expression


Co-expression Network