LOC103036756 (LOC103036756,LOC108434598)


Basic Information

Item Value
gene id LOC103036756
gene name LOC103036756,LOC108434598
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 31499916 ~ 31502661 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU197422
tttaaaacagatctggatatacggagatttttctaaaagaaagACACGTGATTTTGACAACTGAAACTAAAAGCTATCAACCAGCGCAGTAGCAGACTGGAAGAAGAGAAACAATGACGGAGAACGAGAAGCGCTACGACCCCAGGGATACTAGCCTGAAGTTCGTGCAGCGGAGGGATGAAATCACCCTTGATGATGACCCAGACATCCTTAGAGCAGAGATGTCCTGTGGCCATGCTGTCACAGCACAGTCCCTTACAGCATGGTGCCGCAGTCTTCTGGACCAGGGCCAGTACAAGTTCAAGTGTCCAGCCCTAAAAGATGGAACAATTGAGAAGTGTGGTGCTGTGTGGACATATTCAGAAGTGCGGAGGATGGCTTTACTAACTCAGGAGGAGCAAAACCATTTTGAGGAAACCATGGCTGTTTTAGCAGTTGCTGAGTATTGTGAATACAACTCATGCCCTGGTTGCAAGTCATTTGTTGAGAGGGAGGATTTGACCAATCTCTGTGTGAACTGCATCATCTGTACAGCAGAGACTGGTAAGACCTATCACTTCTGCTGGCAGTGCCTGAAGAAATGGAAGGGGCCAGGCCCTCGCTCAGACCGCTGTGACAATGCAGGCTGCAATAACCCTCTCCTTGAGAACCTCTTAAAATGCCCTGATATAATCCTTCCCTATGTACGAAATCTTAAAGTCCCCTCCCTGCGAGCTTGCCCCACCTGTGGCAATGTGGTTGAACATGACAAAACTGGATGTAAGAATATCATATGCAATCGCTGTCAGATTGAATTCTGCTTTTCTTGTTTAAAGTTAACCCCTGTTTGCCTAGAAACAAGTTCACACTTCATACCCTGCTCAGATGGAGTCGCCCCTCGGC
>XM_007248020.2
ATTTTGACAACTGAAACTAAAAGCTATCAACCAGCGCAGTAGCAGACTGGAAGAAGAGAAACAATGACGGAGAACGAGAAGCGCTACGACCCCAGGGATACTAGCCTGAAGTTCGTGCAGCGGAGGGATGAAATCACCCTTGATGATGACCCAGACATCCTTAGAGCAGAGATGTCCTGTGGCCATGCTGTCACAGCACAGTCCCTTACAGCATGGTGCCGCAGTCTTCTGGACCAGGGCCAGTACAAGTTCAAGTGTCCAGCCCTAAAAGATGGAACAATTGAGAAGTGTGGTGCTGTGTGGACATATTCAGAAGTGCGGAGGATGGCTTTACTAACTCAGGAGGAGCAAAACCATTTTGAGGAAACCATGGCTGTTTTAGCAGTTGCTGAGTATTGTGAATACAACTCATGCCCTGGTTGCAAGTCATTTGTTGAGAGGGAGGATTTGACCAATCTCTGTGTGAACTGCATCATCTGTACAGCAGAGACTGGTAAGACCTATCACTTCTGCTGGCAGTGCCTGAAGAAATGGAAGGGGCCAGGCCCTCGCTCAGACCGCTGTGACAATGCAGGCTGCAATAACCCTCTCCTTGAGAACCTCTTAAAATGCCCTGATATAATCCTTCCCTATGTACGAAATCTTAAAGTCCCCTCCCTGCGAGCTTGCCCCACCTGTGGCAATGTGGTTGAACATGACAAAACTGGATGTAAGAATATCATATGCAATCGCTGTCAGATTGAATTCTGCTTTTCTTGTTTAAAGTTAACCCCTGTTTGCCTAGAAACAAGTTCACACTTCATACCCTGCTCAGATGGAGTCGCCCCTCGGCAAACTTCCATTCCATCCTGGAAAAAATAGCCTCCAAAAATACTGTGCATTCTGTTTTAAACAGAAatagggggtgggggtgggaaGATTCATCATAAAACCTTAAGTGAATTAaggattacattacattacattacatttggcagacgcttttgtccaaagcgacttacaata

Function

NR:

description
uncharacterized protein LOC103036756

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197422 False 882 TUCP 0.47 5 31500089 31502661
XM_007248020.2 True 1005 mRNA 0.46 4 31499916 31501601

Neighbor

gene id symbol gene type direction distance location
tkfc tkfc,LOC107094664 coding downstream 82210 31407362 ~ 31417706 (-)
LOC103037388 LOC103037388,LOC108434601,LOC108267726,LOC107675486,LOC105895467 coding downstream 94558 31386254 ~ 31405358 (-)
LOC103038032 NA coding downstream 115607 31375693 ~ 31384309 (-)
ovol1 ovol1,LOC103038355,LOC108434587 coding downstream 131220 31361438 ~ 31368696 (-)
mus81 mus81 coding downstream 140704 31350210 ~ 31359212 (-)
LOC103021832 NA coding upstream 9654 31512315 ~ 31517985 (-)
slc7a7 slc7a7,LOC107738042,LOC107683525,LOC107558406,LOC107731885 coding upstream 25941 31528602 ~ 31546260 (-)
ttc5 ttc5,LOC107738047,LOC107683587 coding upstream 64257 31566918 ~ 31572825 (-)
LOC111194360 NA coding upstream 89630 31592291 ~ 31594387 (-)
htra3 htra3,LOC107757896,LOC107661977,LOC107549726,LOC107707797,LOC107660743 coding upstream 139663 31642324 ~ 31655109 (-)
G145902 NA non-coding downstream 9536 31489823 ~ 31490380 (-)
G145895 NA non-coding downstream 17921 31481572 ~ 31481995 (-)
G145798 LOC108434604 non-coding downstream 207527 31287506 ~ 31292389 (-)
G145777 NA non-coding downstream 333168 31166297 ~ 31166748 (-)
G145776 NA non-coding downstream 335231 31162519 ~ 31164685 (-)
G145917 NA non-coding upstream 58317 31560978 ~ 31561283 (-)
LOC111194380 NA non-coding upstream 82411 31585072 ~ 31590976 (-)
G145929 acox3 non-coding upstream 96835 31599496 ~ 31605450 (-)
G145937 NA non-coding upstream 122067 31624728 ~ 31626952 (-)
G145956 NA non-coding upstream 153194 31655855 ~ 31656261 (-)
G145899 NA other downstream 13846 31483943 ~ 31486070 (-)
LOC103041855 LOC108434590,LOC106577649,LOC105907155,LOC108267266,LOC107707052,LOC107738084,LOC107595290 other downstream 272338 31223447 ~ 31227578 (-)
LOC103030652 NA other downstream 849610 30644395 ~ 30650306 (-)
G145141 NA other downstream 2555855 28938993 ~ 28944061 (-)
G145135 eif4a1,if4a1,eif4a1a,eif4a1b,LOC108443969,LOC107561738,LOC107687036,LOC107704251,LOC107593628,LOC105895537,LOC107098142,LOC108415734,LOC105007919,LOC106560692,LOC106602896 other downstream 2606918 28886240 ~ 28892998 (-)
LOC103035326 sall2 other upstream 47868 31550529 ~ 31558461 (-)
cckar cckar,LOC106608554 other upstream 368396 31871057 ~ 31885409 (-)
G146175 pcdh7,LOC107568147,LOC107753999 other upstream 1597636 33100297 ~ 33105587 (-)
LOC107197333 NA other upstream 2282434 33785095 ~ 33785421 (-)
LOC103031173 adam19a,LOC108428568,LOC108267694,LOC107570237,LOC107660716,LOC106608513 other upstream 2727259 34229920 ~ 34376670 (-)

Expression


Co-expression Network