G146031


Basic Information

Item Value
gene id G146031
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 31933854 ~ 31934067 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU197599
CTCCCGGCACGGTGACGTAGTACAAAAACACGGAGCTCCATTGTTTCCCGCTTCCTCCTCCTTTAGCTAAGCTTCCCCGAGCCCCCAGAATCCCAGACCACGCTGACCCAAACCCCAGTTATCCAGCTAGCTAACAGCTCTGAAGAAACAATgagcagagctgctgctgcttctgcacaGGAGGTCATAATATTTTGGGGGGAACTCGCACCGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197599 True 214 lncRNA 0.54 1 31933854 31934067

Neighbor

gene id symbol gene type direction distance location
plaa plaa,LOC107549730,LOC107661955,LOC107660709 coding downstream 217129 31709203 ~ 31716725 (-)
sh3tc1 sh3tc1 coding downstream 255308 31656834 ~ 31678546 (-)
htra3 htra3,LOC107757896,LOC107661977,LOC107549726,LOC107707797,LOC107660743 coding downstream 278745 31642324 ~ 31655109 (-)
LOC111194360 NA coding downstream 339467 31592291 ~ 31594387 (-)
ttc5 ttc5,LOC107738047,LOC107683587 coding downstream 361029 31566918 ~ 31572825 (-)
trnae-uuc_21 NA coding upstream 122730 32056797 ~ 32056868 (-)
arap2 NA coding upstream 1899267 33833334 ~ 34001620 (-)
paqr9 paqr9 coding upstream 2146187 34080254 ~ 34088604 (-)
LOC111194385 NA coding upstream 2168692 34102759 ~ 34109347 (-)
LOC103030854 LOC103030854,LOC108428571 coding upstream 2498764 34432831 ~ 34458413 (-)
G146030 NA non-coding downstream 7304 31925521 ~ 31926550 (-)
LOC111194382 NA non-coding downstream 84549 31846883 ~ 31849305 (-)
G146002 NA non-coding downstream 150613 31718604 ~ 31783241 (-)
G146051 NA non-coding upstream 137674 32071741 ~ 32072104 (-)
G146060 NA non-coding upstream 293723 32227790 ~ 32228050 (-)
G146066 NA non-coding upstream 344868 32278935 ~ 32279973 (-)
G146068 NA non-coding upstream 352315 32286382 ~ 32286759 (-)
G146078 NA non-coding upstream 440481 32374548 ~ 32374834 (-)
cckar cckar,LOC106608554 other downstream 48445 31871057 ~ 31885409 (-)
LOC103035326 sall2 other downstream 375393 31550529 ~ 31558461 (-)
LOC103036756 LOC103036756,LOC108434598 other downstream 431193 31499916 ~ 31502661 (-)
G145899 NA other downstream 447784 31483943 ~ 31486070 (-)
LOC103041855 LOC108434590,LOC106577649,LOC105907155,LOC108267266,LOC107707052,LOC107738084,LOC107595290 other downstream 706276 31223447 ~ 31227578 (-)
G146175 pcdh7,LOC107568147,LOC107753999 other upstream 1166230 33100297 ~ 33105587 (-)
LOC107197333 NA other upstream 1851028 33785095 ~ 33785421 (-)
LOC103031173 adam19a,LOC108428568,LOC108267694,LOC107570237,LOC107660716,LOC106608513 other upstream 2295853 34229920 ~ 34376670 (-)
hspa12b cct7,hspa12b,LOC107697251,LOC107583281,LOC107721663,LOC107721672,LOC107697252,LOC107744271,LOC107691462,LOC107571934 other upstream 3470831 35404898 ~ 35435707 (-)
G146584 paip2b,LOC103027680,LOC108428580,LOC108263850 other upstream 3529130 35463197 ~ 35479194 (-)

Expression


Co-expression Network