G146068


Basic Information

Item Value
gene id G146068
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 32286382 ~ 32286759 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU197668
CAAACACCCAcaccgcgtattgtaggttctcctcattaaaaagcgttctatatctcttgtcttcagtttatcttgtgtatgaccttgcttttgttttctcgactccgattattgcctttgcctctgatactggattgtttgtgtattacctggactgtgttttcactactgcctcttggattacctctgacattggatctctcgtgtatgaactctggactgtttctcgtttatggtatggttttgccttcattgctctgtttactggtgattacccattgtttctgtatcgactacgtttacatctgtttattttataataaacatatatttttatcagtatctgcacgtgtctgcaattctgtgcacaccatgaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197668 True 378 lncRNA 0.39 1 32286382 32286759

Neighbor

gene id symbol gene type direction distance location
trnae-uuc_21 NA coding downstream 229514 32056797 ~ 32056868 (-)
plaa plaa,LOC107549730,LOC107661955,LOC107660709 coding downstream 569657 31709203 ~ 31716725 (-)
sh3tc1 sh3tc1 coding downstream 607836 31656834 ~ 31678546 (-)
htra3 htra3,LOC107757896,LOC107661977,LOC107549726,LOC107707797,LOC107660743 coding downstream 631273 31642324 ~ 31655109 (-)
LOC111194360 NA coding downstream 691995 31592291 ~ 31594387 (-)
arap2 NA coding upstream 1546575 33833334 ~ 34001620 (-)
paqr9 paqr9 coding upstream 1793495 34080254 ~ 34088604 (-)
LOC111194385 NA coding upstream 1816000 34102759 ~ 34109347 (-)
LOC103030854 LOC103030854,LOC108428571 coding upstream 2146072 34432831 ~ 34458413 (-)
nwd2 nwd2,LOC107661962 coding upstream 2178706 34465465 ~ 34556703 (-)
G146066 NA non-coding downstream 6409 32278935 ~ 32279973 (-)
G146060 NA non-coding downstream 58332 32227790 ~ 32228050 (-)
G146051 NA non-coding downstream 214278 32071741 ~ 32072104 (-)
G146031 NA non-coding downstream 352315 31933854 ~ 31934067 (-)
G146030 NA non-coding downstream 359832 31925521 ~ 31926550 (-)
G146078 NA non-coding upstream 87789 32374548 ~ 32374834 (-)
G146084 NA non-coding upstream 97424 32384183 ~ 32384596 (-)
G146090 NA non-coding upstream 217142 32503901 ~ 32504174 (-)
G146092 NA non-coding upstream 218022 32504781 ~ 32509797 (-)
G146093 NA non-coding upstream 220052 32506811 ~ 32514190 (-)
cckar cckar,LOC106608554 other downstream 400973 31871057 ~ 31885409 (-)
LOC103035326 sall2 other downstream 727921 31550529 ~ 31558461 (-)
LOC103036756 LOC103036756,LOC108434598 other downstream 783721 31499916 ~ 31502661 (-)
G145899 NA other downstream 800312 31483943 ~ 31486070 (-)
LOC103041855 LOC108434590,LOC106577649,LOC105907155,LOC108267266,LOC107707052,LOC107738084,LOC107595290 other downstream 1058804 31223447 ~ 31227578 (-)
G146175 pcdh7,LOC107568147,LOC107753999 other upstream 813538 33100297 ~ 33105587 (-)
LOC107197333 NA other upstream 1498336 33785095 ~ 33785421 (-)
LOC103031173 adam19a,LOC108428568,LOC108267694,LOC107570237,LOC107660716,LOC106608513 other upstream 1943161 34229920 ~ 34376670 (-)
hspa12b cct7,hspa12b,LOC107697251,LOC107583281,LOC107721663,LOC107721672,LOC107697252,LOC107744271,LOC107691462,LOC107571934 other upstream 3118139 35404898 ~ 35435707 (-)
G146584 paip2b,LOC103027680,LOC108428580,LOC108263850 other upstream 3176438 35463197 ~ 35479194 (-)

Expression


Co-expression Network