G146104


Basic Information

Item Value
gene id G146104
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 32612125 ~ 32612562 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU197717
GGACTGCATCTGGATgataggctggactggtcagccAACACAGACAtcctgtacaggaagggacagagccggctctaCTTCCTGAGGAGGCTGGGGTCTTTTAACATCTGTCGGAAGCTCCTGCTGATGTTTTATCAGACTGTGGTGTCCAGCTGTCTTTTCtatgctgtggtgtgctggggaggaagCATGAAGAAGAGGGACGAGATGCGTCTGAACAAGTTGGTCAGGCGTGCGGGGTCCGTGGTTGGCGTGGAGCTGGACTCTGTGGTAACGGTGGCAGAGAGGAGGACACTGCACAAACTACTCTCCATCATGGATGATGATGGTCACCCATTACATTCCATCATCATGGATCATaggagcagtttcagtggcaggttcttgtcacagagctgctctacggacAGACTGAGAAGATCGTTCGTCCCGAGAGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197717 True 438 TUCP 0.53 1 32612125 32612562

Neighbor

gene id symbol gene type direction distance location
stim2 stim2,LOC107707336,LOC107661953,LOC107684943,LOC107757910 coding upstream 609642 31934723 ~ 32002483 (+)
rbpj rbpj,rbpjb,LOC107597867,LOC107707427,LOC107549731 coding upstream 752468 31773504 ~ 31859657 (+)
LOC103032447 LOC108428553,LOC106608959,LOC103364796 coding upstream 904170 31684228 ~ 31707955 (+)
LOC103032972 LOC103032972 coding upstream 941996 31666799 ~ 31670129 (+)
acox3 acox3 coding upstream 992593 31597346 ~ 31619532 (+)
dthd1 NA coding downstream 1399920 34012482 ~ 34025373 (+)
LOC103033595 per1b,per1,LOC108428562,LOC107711564,LOC107684947,LOC107557521,LOC107677837 coding downstream 1415888 34028450 ~ 34061967 (+)
LOC103032728 lrch4,LOC108428567,LOC107661958 coding downstream 1502579 34115141 ~ 34170245 (+)
LOC103039994 NA coding downstream 1577072 34189634 ~ 34191960 (+)
rwdd4 rwdd4 coding downstream 1764160 34376722 ~ 34383744 (+)
G146091 NA non-coding upstream 98319 32504555 ~ 32513806 (+)
G146077 NA non-coding upstream 237084 32374546 ~ 32375041 (+)
G146076 NA non-coding upstream 240319 32371444 ~ 32371806 (+)
G146069 NA non-coding upstream 299583 32312286 ~ 32312542 (+)
G146065 NA non-coding upstream 325436 32286382 ~ 32286689 (+)
G146107 NA non-coding downstream 34995 32647557 ~ 32648161 (+)
G146112 NA non-coding downstream 56949 32669511 ~ 32670970 (+)
G146129 NA non-coding downstream 129546 32742108 ~ 32742545 (+)
G146131 NA non-coding downstream 130398 32742960 ~ 32743293 (+)
G146137 NA non-coding downstream 157551 32770113 ~ 32770371 (+)
trnae-uuc_22 NA other upstream 540562 32071314 ~ 32071563 (+)
tbc1d19 tbc1d19,LOC107660707 other upstream 685575 31892526 ~ 31926550 (+)
smim20 NA other upstream 893074 31717142 ~ 31719051 (+)
G145748 mus81 other upstream 1257681 31352296 ~ 31354444 (+)
G145711 chd3 other upstream 1389791 31197218 ~ 31222334 (+)
pcdh7 pcdh7,LOC107568147,LOC107684944,LOC107561555,LOC107681559,LOC107753999 other downstream 267128 32879690 ~ 33104229 (+)
LOC103033902 pcolce2,pcolceb,LOC108428564,LOC107711558,LOC107557504,LOC107677833,LOC107750313 other downstream 1455019 34067581 ~ 34077975 (+)
cct7 cct7,LOC107697251,LOC107721663,LOC107583281,LOC107744273,LOC107691460,LOC107571935,LOC102781788 other downstream 2787216 35399778 ~ 35406330 (+)
G146805 acadvl,LOC107731915,LOC107595296,LOC107675499 other downstream 3878950 36491512 ~ 36494457 (+)
acap1 acap1,LOC107595305,LOC107731905,LOC107683535,LOC107675497 other downstream 4078131 36690693 ~ 36719287 (+)

Expression


Co-expression Network