G146113


Basic Information

Item Value
gene id G146113
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 32670486 ~ 32670914 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU197726
ttattcttactgttctttatttcttatgaatcgtgctgttgctgctggatgtctacatTTCCTTAGGGCTATTTCATATCTATGTATCtgtatctttatctgtctctgggTTCGCGATTTCGCTTGGGTGCTTTTCGTGTGTTCTCTGTTTGCTGTGTCGTTCGTGGCTTTTCTAGTCTCGCTTTCTTGGTTGTGGTCCGGTATTTCTCATTGTTCTCCTCGGCGCCGTTTCTTCGGCTGCGCTCGGTGCGAGCGCCGCTCTGTTTGTCGGTTTTGGGTATTTATTTCCAAGGGCGATAGTTTGCCGACTGTTGGCTATTAATTTTGACCCTCGCCCCTGGATCTGCCTCTCAGTTCTGTACGAAATGATCGGTGGTGATCGCGTGCgtttcattactttttattttctctgaaattattaataaaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197726 True 429 lncRNA 0.44 1 32670486 32670914

Neighbor

gene id symbol gene type direction distance location
trnae-uuc_21 NA coding downstream 613618 32056797 ~ 32056868 (-)
plaa plaa,LOC107549730,LOC107661955,LOC107660709 coding downstream 953761 31709203 ~ 31716725 (-)
sh3tc1 sh3tc1 coding downstream 991940 31656834 ~ 31678546 (-)
htra3 htra3,LOC107757896,LOC107661977,LOC107549726,LOC107707797,LOC107660743 coding downstream 1015377 31642324 ~ 31655109 (-)
LOC111194360 NA coding downstream 1076099 31592291 ~ 31594387 (-)
arap2 NA coding upstream 1162420 33833334 ~ 34001620 (-)
paqr9 paqr9 coding upstream 1409340 34080254 ~ 34088604 (-)
LOC111194385 NA coding upstream 1431845 34102759 ~ 34109347 (-)
LOC103030854 LOC103030854,LOC108428571 coding upstream 1761917 34432831 ~ 34458413 (-)
nwd2 nwd2,LOC107661962 coding upstream 1794551 34465465 ~ 34556703 (-)
LOC111194384 NA non-coding downstream 45 32667990 ~ 32670441 (-)
G146109 NA non-coding downstream 9523 32660733 ~ 32660963 (-)
G146105 NA non-coding downstream 57923 32612124 ~ 32612563 (-)
G146101 NA non-coding downstream 64206 32606032 ~ 32606280 (-)
G146093 NA non-coding downstream 156296 32506811 ~ 32514190 (-)
G146120 NA non-coding upstream 30143 32701057 ~ 32706474 (-)
G146124 NA non-coding upstream 55911 32726825 ~ 32727036 (-)
G146128 NA non-coding upstream 59738 32730652 ~ 32730862 (-)
G146132 NA non-coding upstream 72045 32742959 ~ 32743293 (-)
G146133 NA non-coding upstream 79858 32750772 ~ 32751272 (-)
cckar cckar,LOC106608554 other downstream 785077 31871057 ~ 31885409 (-)
LOC103035326 sall2 other downstream 1112025 31550529 ~ 31558461 (-)
LOC103036756 LOC103036756,LOC108434598 other downstream 1167825 31499916 ~ 31502661 (-)
G145899 NA other downstream 1184416 31483943 ~ 31486070 (-)
LOC103041855 LOC108434590,LOC106577649,LOC105907155,LOC108267266,LOC107707052,LOC107738084,LOC107595290 other downstream 1442908 31223447 ~ 31227578 (-)
G146175 pcdh7,LOC107568147,LOC107753999 other upstream 429383 33100297 ~ 33105587 (-)
LOC107197333 NA other upstream 1114181 33785095 ~ 33785421 (-)
LOC103031173 adam19a,LOC108428568,LOC108267694,LOC107570237,LOC107660716,LOC106608513 other upstream 1559006 34229920 ~ 34376670 (-)
hspa12b cct7,hspa12b,LOC107697251,LOC107583281,LOC107721663,LOC107721672,LOC107697252,LOC107744271,LOC107691462,LOC107571934 other upstream 2733984 35404898 ~ 35435707 (-)
G146584 paip2b,LOC103027680,LOC108428580,LOC108263850 other upstream 2792283 35463197 ~ 35479194 (-)

Expression


Co-expression Network