G146120


Basic Information

Item Value
gene id G146120
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 32701057 ~ 32706474 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU197737
taatgtcacgtctggtgctgttagctcctctgtcccttccacacccagctctaacggaggttctcaggttaacaactacactacccagaatgcaccacccgctgacatcacgcactcacctgatcacgtgacacctcacctgcttccaccaggaagccccgaatactgattactggcactataaaggtgcacgccaaacagacttcatcgccgcgtattgtaggttatcctcgtacaaagcgttacttatctcttgtctcagtttactttgtgtatgaccttgctttttgtttctcgacgccgattcttgcctctgcctttgatattggattgtttgtgtatgacctggactgtactttcaccaccgcctcttggattatctctgat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197737 True 387 lncRNA 0.48 2 32701057 32706474

Neighbor

gene id symbol gene type direction distance location
trnae-uuc_21 NA coding downstream 644189 32056797 ~ 32056868 (-)
plaa plaa,LOC107549730,LOC107661955,LOC107660709 coding downstream 984332 31709203 ~ 31716725 (-)
sh3tc1 sh3tc1 coding downstream 1022511 31656834 ~ 31678546 (-)
htra3 htra3,LOC107757896,LOC107661977,LOC107549726,LOC107707797,LOC107660743 coding downstream 1045948 31642324 ~ 31655109 (-)
LOC111194360 NA coding downstream 1106670 31592291 ~ 31594387 (-)
arap2 NA coding upstream 1126860 33833334 ~ 34001620 (-)
paqr9 paqr9 coding upstream 1373780 34080254 ~ 34088604 (-)
LOC111194385 NA coding upstream 1396285 34102759 ~ 34109347 (-)
LOC103030854 LOC103030854,LOC108428571 coding upstream 1726357 34432831 ~ 34458413 (-)
nwd2 nwd2,LOC107661962 coding upstream 1758991 34465465 ~ 34556703 (-)
G146113 NA non-coding downstream 30143 32670486 ~ 32670914 (-)
LOC111194384 NA non-coding downstream 30616 32667990 ~ 32670441 (-)
G146109 NA non-coding downstream 40094 32660733 ~ 32660963 (-)
G146105 NA non-coding downstream 88494 32612124 ~ 32612563 (-)
G146101 NA non-coding downstream 94777 32606032 ~ 32606280 (-)
G146124 NA non-coding upstream 20351 32726825 ~ 32727036 (-)
G146128 NA non-coding upstream 24178 32730652 ~ 32730862 (-)
G146132 NA non-coding upstream 36485 32742959 ~ 32743293 (-)
G146133 NA non-coding upstream 44298 32750772 ~ 32751272 (-)
G146143 NA non-coding upstream 138092 32844566 ~ 32849690 (-)
cckar cckar,LOC106608554 other downstream 815648 31871057 ~ 31885409 (-)
LOC103035326 sall2 other downstream 1142596 31550529 ~ 31558461 (-)
LOC103036756 LOC103036756,LOC108434598 other downstream 1198396 31499916 ~ 31502661 (-)
G145899 NA other downstream 1214987 31483943 ~ 31486070 (-)
LOC103041855 LOC108434590,LOC106577649,LOC105907155,LOC108267266,LOC107707052,LOC107738084,LOC107595290 other downstream 1473479 31223447 ~ 31227578 (-)
G146175 pcdh7,LOC107568147,LOC107753999 other upstream 393823 33100297 ~ 33105587 (-)
LOC107197333 NA other upstream 1078621 33785095 ~ 33785421 (-)
LOC103031173 adam19a,LOC108428568,LOC108267694,LOC107570237,LOC107660716,LOC106608513 other upstream 1523446 34229920 ~ 34376670 (-)
hspa12b cct7,hspa12b,LOC107697251,LOC107583281,LOC107721663,LOC107721672,LOC107697252,LOC107744271,LOC107691462,LOC107571934 other upstream 2698424 35404898 ~ 35435707 (-)
G146584 paip2b,LOC103027680,LOC108428580,LOC108263850 other upstream 2756723 35463197 ~ 35479194 (-)

Expression


Co-expression Network