G146129


Basic Information

Item Value
gene id G146129
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 32742108 ~ 32742545 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU197746
tccaacttttgattggtatttatgagctgacacaccccagagtttgcccagatgaacggccacaatgttggttagaagcacctgattaaggaataatattaaatattacctgcacattcaccgataccctttacaatacgtgtaggtgtgattaaagacaccgcaggcgtcccctgcaccggacctacagtaccaggaATTTTACCAATatcatggaaatatattgtgttgtgctgtaattccctGGTTggaagtgtatataagtgtgtgtatggcacagtaacagcctgattacagaatccacggacttggtgactttgcagctttgcttagaccgtgaACATCATCCGCaggaatctggattttaattatttattcgtgggtttgattggtcaattccaatGTGCCCAGTTAGATtacaagccacagacaaagttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197746 True 438 lncRNA 0.42 1 32742108 32742545

Neighbor

gene id symbol gene type direction distance location
stim2 stim2,LOC107707336,LOC107661953,LOC107684943,LOC107757910 coding upstream 739625 31934723 ~ 32002483 (+)
rbpj rbpj,rbpjb,LOC107597867,LOC107707427,LOC107549731 coding upstream 882451 31773504 ~ 31859657 (+)
LOC103032447 LOC108428553,LOC106608959,LOC103364796 coding upstream 1034153 31684228 ~ 31707955 (+)
LOC103032972 LOC103032972 coding upstream 1071979 31666799 ~ 31670129 (+)
acox3 acox3 coding upstream 1122576 31597346 ~ 31619532 (+)
dthd1 NA coding downstream 1269937 34012482 ~ 34025373 (+)
LOC103033595 per1b,per1,LOC108428562,LOC107711564,LOC107684947,LOC107557521,LOC107677837 coding downstream 1285905 34028450 ~ 34061967 (+)
LOC103032728 lrch4,LOC108428567,LOC107661958 coding downstream 1372596 34115141 ~ 34170245 (+)
LOC103039994 NA coding downstream 1447089 34189634 ~ 34191960 (+)
rwdd4 rwdd4 coding downstream 1634177 34376722 ~ 34383744 (+)
G146112 NA non-coding upstream 71138 32669511 ~ 32670970 (+)
G146107 NA non-coding upstream 93947 32647557 ~ 32648161 (+)
G146091 NA non-coding upstream 228302 32504555 ~ 32513806 (+)
G146077 NA non-coding upstream 367067 32374546 ~ 32375041 (+)
G146076 NA non-coding upstream 370302 32371444 ~ 32371806 (+)
G146131 NA non-coding downstream 415 32742960 ~ 32743293 (+)
G146137 NA non-coding downstream 27568 32770113 ~ 32770371 (+)
G146139 NA non-coding downstream 83999 32826544 ~ 32826976 (+)
G146140 NA non-coding downstream 84562 32827107 ~ 32827320 (+)
G146142 NA non-coding downstream 102023 32844568 ~ 32849691 (+)
G146104 NA other upstream 129546 32612125 ~ 32612562 (+)
trnae-uuc_22 NA other upstream 670545 32071314 ~ 32071563 (+)
tbc1d19 tbc1d19,LOC107660707 other upstream 815558 31892526 ~ 31926550 (+)
smim20 NA other upstream 1023057 31717142 ~ 31719051 (+)
G145748 mus81 other upstream 1387664 31352296 ~ 31354444 (+)
pcdh7 pcdh7,LOC107568147,LOC107684944,LOC107561555,LOC107681559,LOC107753999 other downstream 137145 32879690 ~ 33104229 (+)
LOC103033902 pcolce2,pcolceb,LOC108428564,LOC107711558,LOC107557504,LOC107677833,LOC107750313 other downstream 1325036 34067581 ~ 34077975 (+)
cct7 cct7,LOC107697251,LOC107721663,LOC107583281,LOC107744273,LOC107691460,LOC107571935,LOC102781788 other downstream 2657233 35399778 ~ 35406330 (+)
G146805 acadvl,LOC107731915,LOC107595296,LOC107675499 other downstream 3748967 36491512 ~ 36494457 (+)
acap1 acap1,LOC107595305,LOC107731905,LOC107683535,LOC107675497 other downstream 3948148 36690693 ~ 36719287 (+)

Expression


Co-expression Network