G146303


Basic Information

Item Value
gene id G146303
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 34017778 ~ 34092174 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU197960
AAAAATTACagtgatagattttttttttttttataattttatttctaatttttcccattttctccccaatttacacggccaattacccaacccactcattaggactccccctatcactagtaatgccccaacacaccaggagggtgaagacttacacatgcttcctccgatacatgtgaagtcagccaccgcttcttttcgagctgctgctgatgcagcattgctgagcagccagcgcgcttggaggaaagcgcagcgactcggttctgatacatcagctcacagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197960 True 287 lncRNA 0.45 2 34017778 34092174

Neighbor

gene id symbol gene type direction distance location
arap2 NA coding downstream 16158 33833334 ~ 34001620 (-)
trnae-uuc_21 NA coding downstream 1960910 32056797 ~ 32056868 (-)
plaa plaa,LOC107549730,LOC107661955,LOC107660709 coding downstream 2301053 31709203 ~ 31716725 (-)
sh3tc1 sh3tc1 coding downstream 2339232 31656834 ~ 31678546 (-)
htra3 htra3,LOC107757896,LOC107661977,LOC107549726,LOC107707797,LOC107660743 coding downstream 2362669 31642324 ~ 31655109 (-)
LOC111194385 NA coding upstream 10585 34102759 ~ 34109347 (-)
LOC103030854 LOC103030854,LOC108428571 coding upstream 340657 34432831 ~ 34458413 (-)
nwd2 nwd2,LOC107661962 coding upstream 373291 34465465 ~ 34556703 (-)
LOC103030319 LOC108428574,LOC108267639,LOC107583288,LOC107661089,LOC107721658,LOC101077706 coding upstream 806630 34898804 ~ 34943657 (-)
LOC103029676 LOC108428539,LOC108268191,LOC107661966,LOC107744268,LOC107721670,LOC107661087,LOC105894187 coding upstream 1003076 35095250 ~ 35112113 (-)
G146254 NA non-coding downstream 194257 33823015 ~ 33823521 (-)
G146253 NA non-coding downstream 194823 33822460 ~ 33822955 (-)
G146232 NA non-coding downstream 283975 33733539 ~ 33733803 (-)
G146229 NA non-coding downstream 307999 33707655 ~ 33709779 (-)
G146219 NA non-coding downstream 355970 33661473 ~ 33661808 (-)
G146331 NA non-coding upstream 59640 34151814 ~ 34153483 (-)
G146338 NA non-coding upstream 88165 34180339 ~ 34187108 (-)
G146390 NA non-coding upstream 125564 34217738 ~ 34222837 (-)
G146395 rwdd4 non-coding upstream 284547 34376721 ~ 34383713 (-)
G146396 NA non-coding upstream 336824 34428998 ~ 34430757 (-)
LOC107197333 NA other downstream 232357 33785095 ~ 33785421 (-)
G146175 pcdh7,LOC107568147,LOC107753999 other downstream 912191 33100297 ~ 33105587 (-)
cckar cckar,LOC106608554 other downstream 2132369 31871057 ~ 31885409 (-)
LOC103035326 sall2 other downstream 2459317 31550529 ~ 31558461 (-)
LOC103036756 LOC103036756,LOC108434598 other downstream 2515117 31499916 ~ 31502661 (-)
LOC103031173 adam19a,LOC108428568,LOC108267694,LOC107570237,LOC107660716,LOC106608513 other upstream 137746 34229920 ~ 34376670 (-)
hspa12b cct7,hspa12b,LOC107697251,LOC107583281,LOC107721663,LOC107721672,LOC107697252,LOC107744271,LOC107691462,LOC107571934 other upstream 1312724 35404898 ~ 35435707 (-)
G146584 paip2b,LOC103027680,LOC108428580,LOC108263850 other upstream 1371023 35463197 ~ 35479194 (-)
G146686 NA other upstream 1791435 35883609 ~ 35884321 (-)
hdac8 hdac8,LOC107707919,LOC107711573,LOC107695331 other upstream 2206465 36298639 ~ 36338664 (-)

Expression


Co-expression Network