G146666


Basic Information

Item Value
gene id G146666
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 35741331 ~ 35747114 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU198471
TGCGGGGGTGGCCAACCGGCATTTTGgaagcatttgtttgtttatttcaccACTCTTATTTGAACACACCCCATATCTCTAAAAAATTCATTCatctgtttaaaacattttatcagtAACAGGAACAAAGCACACTTACACATAGGTCCGTTTTtgcagtttaatattttagcaaACTTACAAACACAATTGTTTTCTGTAGACTCACCAGCCTCACTCCCTCACTTCCTCCTTCCTCCGACGAAACGGAGGCACTGTTCAAGAGGGTAATTATTGAGGGGGGGAGCGCGCTCTGGGCGGCACATACCATTTTAGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU198471 True 317 lncRNA 0.43 2 35741331 35747114

Neighbor

gene id symbol gene type direction distance location
LOC103025974 ankrd46,LOC108428588 coding downstream 9032 35728712 ~ 35732299 (-)
LOC103027072 t185a,tmem185a,t185l,LOC103027072,LOC108428587,LOC108429425 coding downstream 14131 35720786 ~ 35727200 (-)
m1ap m1ap coding downstream 183189 35520728 ~ 35558142 (-)
nagk nagk,LOC107697250 coding downstream 250973 35485919 ~ 35490358 (-)
LOC103029051 slc8a4b,LOC108428577,LOC108267603,LOC107721660,LOC107583282,LOC107661969 coding downstream 350780 35291168 ~ 35390551 (-)
LOC103025363 LOC108412586 coding upstream 197241 35944355 ~ 35964411 (-)
LOC103025043 LOC108412585 coding upstream 224229 35971343 ~ 35988863 (-)
LOC103024731 rasl11a,LOC108412587,LOC107596470,LOC107707904,LOC107684967 coding upstream 265666 36012780 ~ 36017524 (-)
LOC103023665 LOC108412584,LOC108267422,LOC107702308,LOC107596505 coding upstream 289894 36037008 ~ 36106859 (-)
nhsl2 nhsl2 coding upstream 368543 36115657 ~ 36273884 (-)
G146665 NA non-coding downstream 7028 35732760 ~ 35734303 (-)
G146654 NA non-coding downstream 28018 35709442 ~ 35713313 (-)
G146585 NA non-coding downstream 280501 35459003 ~ 35460830 (-)
G146583 NA non-coding downstream 291838 35449189 ~ 35449493 (-)
G146559 NA non-coding downstream 452922 35269786 ~ 35288409 (-)
G146703 NA non-coding upstream 179729 35926843 ~ 35927528 (-)
G146743 NA non-coding upstream 284025 36031139 ~ 36035502 (-)
G146753 NA non-coding upstream 412642 36159756 ~ 36163324 (-)
G146754 NA non-coding upstream 414486 36161600 ~ 36165981 (-)
G146875 NA non-coding upstream 569550 36316664 ~ 36318207 (-)
G146584 paip2b,LOC103027680,LOC108428580,LOC108263850 other downstream 262137 35463197 ~ 35479194 (-)
hspa12b cct7,hspa12b,LOC107697251,LOC107583281,LOC107721663,LOC107721672,LOC107697252,LOC107744271,LOC107691462,LOC107571934 other downstream 305624 35404898 ~ 35435707 (-)
LOC103031173 adam19a,LOC108428568,LOC108267694,LOC107570237,LOC107660716,LOC106608513 other downstream 1364661 34229920 ~ 34376670 (-)
LOC107197333 NA other downstream 1955910 33785095 ~ 33785421 (-)
G146175 pcdh7,LOC107568147,LOC107753999 other downstream 2635744 33100297 ~ 33105587 (-)
G146686 NA other upstream 136495 35883609 ~ 35884321 (-)
hdac8 hdac8,LOC107707919,LOC107711573,LOC107695331 other upstream 551525 36298639 ~ 36338664 (-)
LOC103043480 LOC108442826,LOC108267520,LOC107738028,LOC107683536 other upstream 919085 36666199 ~ 36706281 (-)
poln poln,haus3 other upstream 1337882 37084996 ~ 37246025 (-)
G147092 NA other upstream 1604964 37352078 ~ 37391735 (-)

Expression


Co-expression Network