G146686


Basic Information

Item Value
gene id G146686
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 35883609 ~ 35884321 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU198491
GCCCTCTACAAAAAAGGCCAAAGTCGTCTCTATTTTCTGAGGCGTCTGAGGTCCTTCAACATCTGCAGGACTATGCTGAAGATTTTCTATGAGTCGGTGGTGGCAAGTGCTATCCTTTATGCTGCTGTATGCTGGGGCAGCAGGCTGAGGGTGGCAGACGCCAACAGAATCAATAAACTGATCCGTAAAGCCAGTGATGTTGTGGGTGTAGACCTGGACTCTCTGATGGCAGTGTCTGAGAGAAGGATACTATCTAAGCTGCAGGCCATCATGGATAATGGCTCCCATCCACTTAATGCCACTGTGATGAGACACAGAAGCACATTCAGTGCAAGACTTATTCATCCTAAATGCACGACAGAACGCCATCAAACTCTATAACTCCTCTCTCACGGTTATCACTAAGCGATAGTAATTAACAAGACTCAATACAATATTAATGTCTGGAATAAATAGGTTGTtactgtaataactgtaattTCCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU198491 True 486 TUCP 0.45 3 35883609 35884321

Neighbor

gene id symbol gene type direction distance location
col4a6 col4a6 coding downstream 17678 35735172 ~ 35865931 (-)
LOC103025974 ankrd46,LOC108428588 coding downstream 151310 35728712 ~ 35732299 (-)
LOC103027072 t185a,tmem185a,t185l,LOC103027072,LOC108428587,LOC108429425 coding downstream 156409 35720786 ~ 35727200 (-)
m1ap m1ap coding downstream 325467 35520728 ~ 35558142 (-)
nagk nagk,LOC107697250 coding downstream 393251 35485919 ~ 35490358 (-)
LOC103025363 LOC108412586 coding upstream 60034 35944355 ~ 35964411 (-)
LOC103025043 LOC108412585 coding upstream 87022 35971343 ~ 35988863 (-)
LOC103024731 rasl11a,LOC108412587,LOC107596470,LOC107707904,LOC107684967 coding upstream 128459 36012780 ~ 36017524 (-)
LOC103023665 LOC108412584,LOC108267422,LOC107702308,LOC107596505 coding upstream 152687 36037008 ~ 36106859 (-)
nhsl2 nhsl2 coding upstream 231336 36115657 ~ 36273884 (-)
G146666 NA non-coding downstream 136495 35741331 ~ 35747114 (-)
G146665 NA non-coding downstream 149306 35732760 ~ 35734303 (-)
G146654 NA non-coding downstream 170296 35709442 ~ 35713313 (-)
G146585 NA non-coding downstream 422779 35459003 ~ 35460830 (-)
G146583 NA non-coding downstream 434116 35449189 ~ 35449493 (-)
G146703 NA non-coding upstream 42522 35926843 ~ 35927528 (-)
G146743 NA non-coding upstream 146818 36031139 ~ 36035502 (-)
G146753 NA non-coding upstream 275435 36159756 ~ 36163324 (-)
G146754 NA non-coding upstream 277279 36161600 ~ 36165981 (-)
G146875 NA non-coding upstream 432343 36316664 ~ 36318207 (-)
G146584 paip2b,LOC103027680,LOC108428580,LOC108263850 other downstream 404415 35463197 ~ 35479194 (-)
hspa12b cct7,hspa12b,LOC107697251,LOC107583281,LOC107721663,LOC107721672,LOC107697252,LOC107744271,LOC107691462,LOC107571934 other downstream 447902 35404898 ~ 35435707 (-)
LOC103031173 adam19a,LOC108428568,LOC108267694,LOC107570237,LOC107660716,LOC106608513 other downstream 1506939 34229920 ~ 34376670 (-)
LOC107197333 NA other downstream 2098188 33785095 ~ 33785421 (-)
G146175 pcdh7,LOC107568147,LOC107753999 other downstream 2778022 33100297 ~ 33105587 (-)
hdac8 hdac8,LOC107707919,LOC107711573,LOC107695331 other upstream 414318 36298639 ~ 36338664 (-)
LOC103043480 LOC108442826,LOC108267520,LOC107738028,LOC107683536 other upstream 781878 36666199 ~ 36706281 (-)
poln poln,haus3 other upstream 1200675 37084996 ~ 37246025 (-)
G147092 NA other upstream 1467757 37352078 ~ 37391735 (-)
G147302 slc7a8a,LOC107742270,LOC107668787,LOC107588204,LOC107562402,LOC107691931,LOC107753926,LOC108440039 other upstream 1624340 37508661 ~ 37514452 (-)

Expression


Co-expression Network