G146703


Basic Information

Item Value
gene id G146703
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 35926843 ~ 35927528 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU198510
GATTTGGTTCAGACTTTCATGTGTGAAAACGACTAAATAAGAGAAAGTCAATCAAAATGCAACGCTTACAAGTTACCACATTACAACACATACAAACTTTATTGGCCATGCTGTTTGCAGATACTGCAGAGTTTTTAATAAAAGGCAACAATGAATACTGCAGAAATGTTTATGTTGACACAAACATATGTGGACTtagatttctttatttcagtctCTTAAAAGTTTATAACAACTTCTggataataaacataaaaaatagaatttgaAATACACATTCTTGCACCCTATGATGACTTaaattcaaaacgatttgaaaaCAGTCACAGGAATCATTGGCTCTCAAATGCTCTTGTTCGCCGTATGTACAATATAAACCACACTGTGGCGTATGGTGACATAAGACCCAGTAGAAACTGAACAAACTCGTTTTATTAATACTCTACTGATTTCAAAAGGaatttagatttaaataaaGCTCAAGCTGGATTGGAATATTAATGTTTGCTTTATTAGATTATTCAGTTACTCAGTTAGTGTGGGCCTCTGAACTGGCTTAGGGGATTTTCAAGAGGAAGGATGTCCACTAAAATCAGTAGTTTGTAAAGTTACCTGATAATGAAATATGAATTCATTTATTGACACAGCCAATTCAAGCTTCAAGcttaagttatatatatatatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU198510 True 686 lncRNA 0.32 1 35926843 35927528

Neighbor

gene id symbol gene type direction distance location
col4a6 col4a6 coding downstream 60912 35735172 ~ 35865931 (-)
LOC103025974 ankrd46,LOC108428588 coding downstream 194544 35728712 ~ 35732299 (-)
LOC103027072 t185a,tmem185a,t185l,LOC103027072,LOC108428587,LOC108429425 coding downstream 199643 35720786 ~ 35727200 (-)
m1ap m1ap coding downstream 368701 35520728 ~ 35558142 (-)
nagk nagk,LOC107697250 coding downstream 436485 35485919 ~ 35490358 (-)
LOC103025363 LOC108412586 coding upstream 16827 35944355 ~ 35964411 (-)
LOC103025043 LOC108412585 coding upstream 43815 35971343 ~ 35988863 (-)
LOC103024731 rasl11a,LOC108412587,LOC107596470,LOC107707904,LOC107684967 coding upstream 85252 36012780 ~ 36017524 (-)
LOC103023665 LOC108412584,LOC108267422,LOC107702308,LOC107596505 coding upstream 109480 36037008 ~ 36106859 (-)
nhsl2 nhsl2 coding upstream 188129 36115657 ~ 36273884 (-)
G146666 NA non-coding downstream 179729 35741331 ~ 35747114 (-)
G146665 NA non-coding downstream 192540 35732760 ~ 35734303 (-)
G146654 NA non-coding downstream 213530 35709442 ~ 35713313 (-)
G146585 NA non-coding downstream 466013 35459003 ~ 35460830 (-)
G146583 NA non-coding downstream 477350 35449189 ~ 35449493 (-)
G146743 NA non-coding upstream 103611 36031139 ~ 36035502 (-)
G146753 NA non-coding upstream 232228 36159756 ~ 36163324 (-)
G146754 NA non-coding upstream 234072 36161600 ~ 36165981 (-)
G146875 NA non-coding upstream 389136 36316664 ~ 36318207 (-)
G146892 NA non-coding upstream 513227 36440755 ~ 36444051 (-)
G146686 NA other downstream 42522 35883609 ~ 35884321 (-)
G146584 paip2b,LOC103027680,LOC108428580,LOC108263850 other downstream 447649 35463197 ~ 35479194 (-)
hspa12b cct7,hspa12b,LOC107697251,LOC107583281,LOC107721663,LOC107721672,LOC107697252,LOC107744271,LOC107691462,LOC107571934 other downstream 491136 35404898 ~ 35435707 (-)
LOC103031173 adam19a,LOC108428568,LOC108267694,LOC107570237,LOC107660716,LOC106608513 other downstream 1550173 34229920 ~ 34376670 (-)
LOC107197333 NA other downstream 2141422 33785095 ~ 33785421 (-)
hdac8 hdac8,LOC107707919,LOC107711573,LOC107695331 other upstream 371111 36298639 ~ 36338664 (-)
LOC103043480 LOC108442826,LOC108267520,LOC107738028,LOC107683536 other upstream 738671 36666199 ~ 36706281 (-)
poln poln,haus3 other upstream 1157468 37084996 ~ 37246025 (-)
G147092 NA other upstream 1424550 37352078 ~ 37391735 (-)
G147302 slc7a8a,LOC107742270,LOC107668787,LOC107588204,LOC107562402,LOC107691931,LOC107753926,LOC108440039 other upstream 1581133 37508661 ~ 37514452 (-)

Expression


Co-expression Network