G41555


Basic Information

Item Value
gene id G41555
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 3268664 ~ 3336009 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU47175
CTTTTATTACTTATTGTAATCAAAACAGATGGAAACATATTGTGAGTTGTAGTACTGCAAGTCAGAATGTAGCACTGATGAAGTCAGTATAAACTGACTTTATTGTAATTGTCATTTTGAAATATTTGTGCTGCTCATTACACGTCAATGCAATAATATGGATTTATTGGTTATCAAAAAGAGCTTATCATCAGAGCAGTGTACAAACAATATTATATCAAGGCATGTTGTACTAAAAAGCATTTGAGACAAGTTTGATTCAAAATTATGCAATTAAAGGTGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTTTGTGTGTGTTCTGTTTCACATACTATTTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47175 True 357 lncRNA 0.32 2 3268664 3336009

Neighbor

gene id symbol gene type direction distance location
CI01000006_03232003_03242938 NA coding upstream 25302 3232003 ~ 3243362 (+)
CI01000006_03164803_03183473 PCNX3 coding upstream 84945 3164189 ~ 3183719 (+)
CI01000006_03102358_03152576 NRXN2A coding upstream 115795 3102358 ~ 3152869 (+)
CI01000006_03016090_03016706 NA coding upstream 251350 3015137 ~ 3017314 (+)
CI01000006_02774064_02933983 NRXN2A coding upstream 334681 2774064 ~ 2933983 (+)
CI01000006_03350988_03356496 NA coding downstream 14755 3350764 ~ 3357157 (+)
CI01000006_03412397_03437333 MARK2A coding downstream 76388 3412397 ~ 3437710 (+)
CI01000006_03441003_03442001 NA coding downstream 104647 3440656 ~ 3442955 (+)
CI01000006_03446979_03447865 NA coding downstream 110970 3446979 ~ 3447916 (+)
CI01000006_03483581_03526564 SLC8A4A coding downstream 147572 3483581 ~ 3527202 (+)
G41543 NA non-coding upstream 5222 3258049 ~ 3263442 (+)
G41614 NA non-coding upstream 18594 3249123 ~ 3250070 (+)
G41606 NA non-coding upstream 69899 3198562 ~ 3198765 (+)
G41605 NA non-coding upstream 70378 3197836 ~ 3198286 (+)
G41538 NA non-coding upstream 235954 3022098 ~ 3032710 (+)
G41506 NA non-coding downstream 3230 3339239 ~ 3344280 (+)
G41526 NA non-coding downstream 21526 3357535 ~ 3359262 (+)
G41542 NA non-coding downstream 26986 3362995 ~ 3365567 (+)
G41566 NA non-coding downstream 113441 3449450 ~ 3455035 (+)
G41519 NA non-coding downstream 195756 3531765 ~ 3533019 (+)
G41591 NA other upstream 429243 2836167 ~ 2839421 (+)
G41424 NA other upstream 608094 2645662 ~ 2660570 (+)
G41170 NA other upstream 1572843 1692065 ~ 1695821 (+)
G40768 NA other upstream 2775638 488407 ~ 493026 (+)
G40767 NA other upstream 2785329 360009 ~ 484185 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other downstream 393221 3734554 ~ 3736035 (+)
G41996 NA other downstream 1781197 5117206 ~ 5124149 (+)
G43896 NA other downstream 2434080 5770089 ~ 5771775 (+)
CI01000006_06104927_06109730 NA other downstream 2772475 6104927 ~ 6109820 (+)
CI01000006_06122278_06122736 NA other downstream 2786026 6122035 ~ 6122751 (+)

Expression


Co-expression Network