G147320


Basic Information

Item Value
gene id G147320
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 37584618 ~ 37602922 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU199326
gaaggttttatttctttcatgTACAATTGTACAACAGCGATGCTATACACATTCATTCatcaaaacaaaatgaaaataaaaatcgtattttaatgtgtttatatgcgggaaaatttatttattacaaatattttagacaaatagtattttatttatttttctgattattacaggtaaaaagaacaaaaacaaatataacaagAACAGGACAGTGCATTTACTcctgtattttatgtataaacATTTGGCAGCAGATATTTAATCATCATGAGTGACAGGTGtgatgatcagtggagctgagttTTTACCTCCATCATTAACACAGGGGCTGAAGTATGGATAGAGTTTCTCAGTGAAAGACTGACCAGTGAAAGAGTAGATATGAGACCTGGCCTCCACATCATAAAAGGAGACCAGACCCTCCTCATAATCCACAAACACCCCCACCTTCTGGAGATTCTCtctcagagagagggagactgaGGGACCAGCAAGAGCCTTATACTGATTCCCATTCCTCAGTCCTACAGTCCAGAATCCATTCTGTGGAGTCAGTGTATTCTTCCCCTTCCTGTTAACAGACTCTCTGACCACTCCTAAATCCCACCTAGTCTTCCCACTGACCTGCACCTCATAGTAAAATCTCCCTGAGGAGAATCCCTCCTTTCCCAGAACACAGATACAATTATTAAATCTCTCTGAATTGTCAGGAAGATTCTGTTTTGTGCCTCCACATCTCACTTGTTTTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU199326 True 751 lncRNA 0.38 2 37584618 37602922

Neighbor

gene id symbol gene type direction distance location
LOC103040682 nedd8,LOC103040682,LOC108440049,LOC107562413,LOC107588156,LOC107384241 coding downstream 59511 37522233 ~ 37525107 (-)
LOC103042927 NA coding downstream 95083 37466834 ~ 37489535 (-)
LOC103039127 NA coding downstream 118366 37461195 ~ 37466252 (-)
svep1 svep1 coding downstream 161477 37246071 ~ 37423141 (-)
nelfa nelfa,LOC107562310,LOC107691925,LOC107741467,LOC107753914,LOC100380775 coding downstream 547043 37027520 ~ 37037575 (-)
LOC111194362 NA coding upstream 58754 37661676 ~ 37672030 (-)
lrp10 lrp10 coding upstream 71932 37674854 ~ 37685722 (-)
LOC103024124 acin1,LOC108440069,LOC108267949 coding upstream 139635 37742557 ~ 37766960 (-)
LOC103023814 LOC108440030 coding upstream 167895 37770817 ~ 37787820 (-)
LOC103023489 LOC103023489 coding upstream 186183 37789105 ~ 37795277 (-)
G147314 NA non-coding downstream 19416 37562807 ~ 37565202 (-)
G147293 NA non-coding downstream 65452 37518073 ~ 37519166 (-)
LOC111194395 NA non-coding downstream 123426 37455012 ~ 37461192 (-)
G147109 NA non-coding downstream 137570 37446806 ~ 37447048 (-)
LOC111194392 NA non-coding downstream 187566 37395396 ~ 37397052 (-)
G147359 NA non-coding upstream 208676 37811598 ~ 37812345 (-)
G147386 vbp1,LOC107588140,LOC107668907,LOC107562614,LOC107742288 non-coding upstream 400557 38003479 ~ 38009023 (-)
G147390 NA non-coding upstream 419133 38022055 ~ 38022505 (-)
G147397 NA non-coding upstream 438530 38041452 ~ 38041671 (-)
G147407 NA non-coding upstream 490590 38093512 ~ 38122985 (-)
G147302 slc7a8a,LOC107742270,LOC107668787,LOC107588204,LOC107562402,LOC107691931,LOC107753926,LOC108440039 other downstream 70166 37508661 ~ 37514452 (-)
G147092 NA other downstream 192883 37352078 ~ 37391735 (-)
poln poln,haus3 other downstream 338593 37084996 ~ 37246025 (-)
LOC103043480 LOC108442826,LOC108267520,LOC107738028,LOC107683536 other downstream 878337 36666199 ~ 36706281 (-)
hdac8 hdac8,LOC107707919,LOC107711573,LOC107695331 other downstream 1245954 36298639 ~ 36338664 (-)
mrpl52 mrpl52 other upstream 120462 37723384 ~ 37726809 (-)
LOC111194363 LOC108267931 other upstream 237960 37840882 ~ 37858571 (-)
LOC103047699 NA other upstream 301970 37904892 ~ 37910873 (-)
LOC103040134 NA other upstream 1404064 39006986 ~ 39012417 (-)
LOC103039602 rbm4.3,LOC106577685,LOC101471146 other upstream 1411080 39014002 ~ 39017632 (-)

Expression


Co-expression Network