G147914


Basic Information

Item Value
gene id G147914
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 40140236 ~ 40185348 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU200132
GGAGCGGAAAAGCGATGGAGTTTCTCTCCCTCAGGCCTTTGATCGAGCTCTCTGAGCGGTATCCAGCAGACAGCTTCTCTCGCACAGCTGTGTGGTCTTACTGATGTGCAGCGGGAGGAAAGAGGCGCTTTACCGTTAATCAATTACAGTCCTCCTCTGTCCTCAGACTCCTCCGGGAAACACGGAGAGCACCGGCGGAATACACGGCACGCAGGGAAGGAAGCAGGCAGAGAGGCAGGCAGGCAGGGATCCCAACGTGGCAGAGGAAAGGACAAACCAACATCAGAACATCCTAATCTAGAGAAACTCTCAGCACCTGACCTCGTCTGCTTCACCCCAGAGCTTCAGAACCACAACAGAATGGGTTACACTGGATCCAAAGCTTGGAATTCTGGAATCATTGGGCACAATTCAGGAATACCACATGGATGGGGCACCAGTTGACTTGAAGACAAAAACCAGGTGTGTCTCGCACCTTGTCTCCCCCCATCTGTTCCTCTGCGTCTGAAAaggagagcgagggagaggaaAAGACGAGTGTGaaagaaactcccagaggcagAGAGGAGTAAAGACATTCCGGAGGTGTGAGTCTGTCCTCACGCCATTCCTTCATCATTCTGCTGCTTGTCTTCTCCCAACTACTTCTGCAGCAGCCCAGGGCAAAGAATgaccctgaaacacacacacacacacacacacatacatacacacaaatgcacacacacacacacctggaatTGCTGAATTGAGACATCATCTGTCAGAAATGCTTAAAGCTACCTACTGGAAGAACAAATTACACACTCGCAAATGGCACAtgtgcacccacacacacacatacacttgttTATATGTCTAATGAGGACGTTGGGTCCTATATACAGACAGCACACTCTGCAAAATTGAATTTCAGAGAAGTTGCAACACCACTGAACTTCCCATGAACTTCCCAccctatatatttttattatcttaatGTATTTTGTCCACATTTTGGGCTCACTGCATTTAGTCACTGAAAACGAAACTggagataaatataaaataaaaataataattttcagtGTTGTCATGTGCACAGGAAAAAGTTTTCagtatatgaataaatatataaatgctgCTCTATTACAAACATATAATGTGCTATTTAGATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU200132 True 1158 lncRNA 0.46 4 40140236 40185348

Neighbor

gene id symbol gene type direction distance location
pop7 pop7,LOC107750778,LOC107753970,LOC107595279,LOC107560286 coding downstream 291716 39845890 ~ 39848520 (-)
LOC103028039 tmem102,LOC108434872,LOC108267795,LOC107750772,LOC107659729,LOC107564774,LOC107560290 coding downstream 655574 39467363 ~ 39484662 (-)
chrnb1 chrnb1,LOC108267171,LOC107659727,LOC107664276,LOC103358387 coding downstream 895955 39198862 ~ 39244281 (-)
LOC103034907 chrnb1l,LOC108434832,LOC108268067,LOC107753962 coding downstream 945037 39157149 ~ 39195199 (-)
LOC103035548 cldn7a,LOC103035548,LOC108434869,LOC107667734,LOC107753993,LOC108268068,LOC107572167 coding downstream 978529 39153237 ~ 39161707 (-)
trnan-guu_3 NA coding upstream 426191 40611539 ~ 40611612 (-)
trnan-guu_4 NA coding upstream 426610 40611958 ~ 40612031 (-)
trnan-guu_5 NA coding upstream 427029 40612377 ~ 40612450 (-)
trnan-guu_6 NA coding upstream 427448 40612796 ~ 40612869 (-)
trnan-guu_7 NA coding upstream 427867 40613215 ~ 40613288 (-)
G147897 NA non-coding downstream 28483 40111304 ~ 40111753 (-)
G147872 NA non-coding downstream 192806 39890117 ~ 39947430 (-)
G147869 NA non-coding downstream 246978 39888189 ~ 39893258 (-)
G147807 nlgn2,nlgn2a,LOC103033407,LOC107753966,LOC107564776 non-coding downstream 363302 39771982 ~ 39776934 (-)
G147714 NA non-coding downstream 650045 39489370 ~ 39490191 (-)
G148012 NA non-coding upstream 343742 40529090 ~ 40532670 (-)
G148024 NA non-coding upstream 410783 40596131 ~ 40597033 (-)
LOC111194401 tmem88,tmem88b,LOC104964151,LOC102237254,LOC103375639,LOC108410821 non-coding upstream 416948 40602296 ~ 40622087 (-)
G148052 NA non-coding upstream 444123 40629471 ~ 40629687 (-)
G148057 NA non-coding upstream 448981 40634329 ~ 40641995 (-)
G147828 NA other downstream 318661 39820751 ~ 39821575 (-)
ufsp1 NA other downstream 322473 39815907 ~ 39817763 (-)
tmem256 tmem256,LOC107564775,LOC107659713,LOC107560291 other downstream 642002 39490561 ~ 39498234 (-)
fgf11 fgf11,fgf11a,LOC107664286,LOC107753963,LOC107750771,LOC107659728 other downstream 742224 39265349 ~ 39398012 (-)
LOC103036465 NA other downstream 1016421 39117267 ~ 39123815 (-)

Expression


Co-expression Network