G148120


Basic Information

Item Value
gene id G148120
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 40875427 ~ 40876486 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU200435
tggcccactaataaagacatgatcattctatacttttaatggtagatgtattcttacatggagagacagaatattaaaaagaaaatccagaaaataaatctaaggaatatatattaattgatttgtatttcatggagtgaaataagtatttgatcccttagtattcattagcagttctggcttttacagaccagttagacactcccaatcaacttgttacctgacctgaagccacctgttctcactaatcacttgtgtgaaaaacacctgtccacagaatcagacagatcacacagatttcaagtctccaacatgggtaaaaccaaagagctgtcacaggacctcagagtcagaattgttgaccttcacaaagctggaatgggctacaaaaagattagtaaggtgttggatgtgaaagtaacaactattggtgcaattatcagaaagtttaaagagtataacatgacaatcaacagacctcggcccggtgctccaaagaagatttcgcctcgtggggtggcaatgatgctgcaaccactcggcaggagttagcaaatgacctgaaggcagctgggaccacagtttgcaaggaaacaattggcaacactttgcgcaacaatggattcacatcctgcagtgcccgaaaggtacccctgctgaagagagcacatgtggaggcgcgcctcaagtatgccaatgatcatttgaaagatgaaccaagttattgggagaaggttttgtggtcagacgagaccaaaattgaactttttggcctcaactccacccgccatgtgtggaggaagaaaaatgctgcctatgaccccaagaacactgtgcccaccgtcaagcatggaggtggaagcataatgttttgggggtgtttctctgccaagggtacagggctacttcaccgcatcactgggaagatggatggagccatgtaccgcacaatcctgagggacaacctcctcccctctgccagggatctgaaaatgggccgtggttgggtcttccaacatgataacgaccctaaacata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU200435 True 1038 lncRNA 0.44 2 40875427 40876486

Neighbor

gene id symbol gene type direction distance location
LOC103041524 NA coding downstream 41641 40824081 ~ 40833786 (-)
ankrd53 NA coding downstream 82668 40785512 ~ 40792759 (-)
trnas-gcu_3 NA coding downstream 119386 40755960 ~ 40756041 (-)
trnak-cuu_8 NA coding downstream 208595 40666760 ~ 40666832 (-)
trnan-guu_8 NA coding downstream 261720 40613634 ~ 40613707 (-)
LOC111194366 NA coding upstream 32371 40908857 ~ 40909862 (-)
LOC111194367 NA coding upstream 143842 41020328 ~ 41023008 (-)
LOC103042841 NA coding upstream 150640 41027126 ~ 41031436 (-)
G148088 NA non-coding downstream 43763 40831395 ~ 40831664 (-)
G148077 tex261,LOC106577837 non-coding downstream 93426 40772650 ~ 40782001 (-)
G148056 cunh20orf27,c7h20orf27,si:ch211-74f19.2,c1h20orf27,LOC104943354 non-coding downstream 182778 40675959 ~ 40692649 (-)
G148058 NA non-coding downstream 232020 40643146 ~ 40643407 (-)
G148057 NA non-coding downstream 233432 40634329 ~ 40641995 (-)
LOC111194403 NA non-coding upstream 57914 40934400 ~ 40935933 (-)
LOC111194404 NA non-coding upstream 72041 40948527 ~ 40950045 (-)
G148173 NA non-coding upstream 112736 40989222 ~ 40989474 (-)
G147828 NA other downstream 1053852 39820751 ~ 39821575 (-)
ufsp1 NA other downstream 1057664 39815907 ~ 39817763 (-)
tmem256 tmem256,LOC107564775,LOC107659713,LOC107560291 other downstream 1377193 39490561 ~ 39498234 (-)
fgf11 fgf11,fgf11a,LOC107664286,LOC107753963,LOC107750771,LOC107659728 other downstream 1477415 39265349 ~ 39398012 (-)
LOC103036465 NA other downstream 1751612 39117267 ~ 39123815 (-)

Expression


Co-expression Network