nmnat3 (nmnat3)


Basic Information

Item Value
gene id nmnat3
gene name nmnat3
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 8097854 ~ 8123480 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007228665.3
CCTTTCTAAATCAGCTGAGGTTTTCCGGGGGAGCGTAAAGCGTGTAACACCAGGCTGGTTAGCTATGAGGCTAGCTGGCGCTGTGTAAAGCCGGGTTTAAACCAGTTTCACACACTGGAGCAGGGTGTGAGGCCGAGGCATGGCTGGCCGGATTCCCCTCATCCTGTTGGCATGTGGCTCCTTCAACCCCATCACCTACCAGCATATGAGACTCTTTGAGCTCGCCAGGGACCACATGCACCAAACAGGTCTTTATCAGGTGGTGGGTGGAATTGTTTCCCCAGTTGGTGATGAATATGCTAAACAGGGACTGGTTTCATCACAACACCGACTGGCCATGGCCAGACTGGCCCTGCAGAGTTCAGACTGGGTCACTGTGGACGACTGGGAAAGTCGACAAGCTGACTGGACAGAGACTGTGGTCACTATGAGGTACCACCACAACTGCATGGTAGAGAAATGCTGGCCAAGCACGAAAGCCACACCCCCAGAACAAACTCTTGCTTCTGGTCCTTCCCAGCTGAAGCTGCTCTGCGGTGCTGATTTCCTGGAAACGTTTAAAGTTCCAGGCCTGTGGGCGGACGAGCACATCGAGGAGGTGGTGGGCCGCTTCGGCCTGGTGTGCGTGAGCCGCGGTGGGCTGCAGCCGGAGAGGACCGTGCACGAGTGCGACCTTCTTCATAAGCACAAGCGCAACATTTTCTTGGTGCGGGAATGGATCCGCAACGAGATCAGCGCCACCGAGGTCCGCCGAGCCCTTCGCCGAGGCCTCAGCGTCAAGTTCCTCATCCCAGACAACGTCATCGACTACATCAGAGAGCACAACCTGTACACGCCGACCagcgagctgaagaacaaaaacattaaactgcGGCCCTTCACCAAGCAGCAGCCGGTGCTGGACTGAACCTGATGCAGGGATGGAGGAGGTGCTATACTGTATTAGGTTGAGTAATAGGTTGAAATCACCATTCAGCTACAAGTTCACTGTGTGGTAGAATGAAGATTCATTACTTAcaggtgaaaaatatataattatatcatTGAAATATCATtgagttactttatttcagtaattcagttcaaaa
>XM_007228666.3
GTGTGGGGGGTAATACCCGCTCAGACAGCGGCCTGGGGGTGTTAAAGCTAGCGGGCTAATGGAGCTGCGGTTACCCGCTTCAGTTTCACACACTGGAGCAGGGTGTGAGGCCGAGGCATGGCTGGCCGGATTCCCCTCATCCTGTTGGCATGTGGCTCCTTCAACCCCATCACCTACCAGCATATGAGACTCTTTGAGCTCGCCAGGGACCACATGCACCAAACAGGTCTTTATCAGGTGGTGGGTGGAATTGTTTCCCCAGTTGGTGATGAATATGCTAAACAGGGACTGGTTTCATCACAACACCGACTGGCCATGGCCAGACTGGCCCTGCAGAGTTCAGACTGGGTCACTGTGGACGACTGGGAAAGTCGACAAGCTGACTGGACAGAGACTGTGGTCACTATGAGGTACCACCACAACTGCATGGTAGAGAAATGCTGGCCAAGCACGAAAGCCACACCCCCAGAACAAACTCTTGCTTCTGGTCCTTCCCAGCTGAAGCTGCTCTGCGGTGCTGATTTCCTGGAAACGTTTAAAGTTCCAGGCCTGTGGGCGGACGAGCACATCGAGGAGGTGGTGGGCCGCTTCGGCCTGGTGTGCGTGAGCCGCGGTGGGCTGCAGCCGGAGAGGACCGTGCACGAGTGCGACCTTCTTCATAAGCACAAGCGCAACATTTTCTTGGTGCGGGAATGGATCCGCAACGAGATCAGCGCCACCGAGGTCCGCCGAGCCCTTCGCCGAGGCCTCAGCGTCAAGTTCCTCATCCCAGACAACGTCATCGACTACATCAGAGAGCACAACCTGTACACGCCGACCagcgagctgaagaacaaaaacattaaactgcGGCCCTTCACCAAGCAGCAGCCGGTGCTGGACTGAACCTGATGCAGGGATGGAGGAGGTGCTATACTGTATTAGGTTGAGTAATAGGTTGAAATCACCATTCAGCTACAAGTTCACTGTGTGGTAGAATGAAGATTCATTACTTAcaggtgaaaaatatataattatatcatTGAAATATCATtgagttactttatttcagtaattcagttcaaaa
>XM_007228667.3
TCCGGGGGAGCGTAAAGCGTGTAACACCAGGCTGGTTAGCTATGAGGCTAGCTGGCGCTGTGTAAAGCCGGGTTTAAACCAGGTAAACTTCGCTTTCAGCGCCGCTGAGGAGCTGTAAATCTCAGCCCAGCTCCACGGAGCCGCGCCGCGTTTCACACACTGGAGCAGGGTGTGAGGCCGAGGCATGGCTGGCCGGATTCCCCTCATCCTGTTGGCATGTGGCTCCTTCAACCCCATCACCTACCAGCATATGAGACTCTTTGAGCTCGCCAGGGACCACATGCACCAAACAGGTCTTTATCAGGTGGTGGGTGGAATTGTTTCCCCAGTTGGTGATGAATATGCTAAACAGGGACTGGTTTCATCACAACACCGACTGGCCATGGCCAGACTGGCCCTGCAGAGTTCAGACTGGGTCACTGTGGACGACTGGGAAAGTCGACAAGCTGACTGGACAGAGACTGTGGTCACTATGAGGTACCACCACAACTGCATGGTAGAGAAATGCTGGCCAAGCACGAAAGCCACACCCCCAGAACAAACTCTTGCTTCTGGTCCTTCCCAGCTGAAGCTGCTCTGCGGTGCTGATTTCCTGGAAACGTTTAAAGTTCCAGGCCTGTGGGCGGACGAGCACATCGAGGAGGTGGTGGGCCGCTTCGGCCTGGTGTGCGTGAGCCGCGGTGGGCTGCAGCCGGAGAGGACCGTGCACGAGTGCGACCTTCTTCATAAGCACAAGCGCAACATTTTCTTGGTGCGGGAATGGATCCGCAACGAGATCAGCGCCACCGAGGTCCGCCGAGCCCTTCGCCGAGGCCTCAGCGTCAAGTTCCTCATCCCAGACAACGTCATCGACTACATCAGAGAGCACAACCTGTACACGCCGACCagcgagctgaagaacaaaaacattaaactgcGGCCCTTCACCAAGCAGCAGCCGGTGCTGGACTGAACCTGATGCAGGGATGGAGGAGGTGCTATACTGTATTAGGTTGAGTAATAGGTTGAAATCACCATTCAGCTACAAGTTCACTGTGTGGTAGAATGAAGATTCATTACTTAcaggtgaaaaatatataattatatcatTGAAATATCATtgagttactttatttcagtaattcagttcaaaa

Function

symbol description
nmnat3 Predicted to enable nicotinamide-nucleotide adenylyltransferase activity and nicotinate-nucleotide adenylyltransferase activity. Predicted to be involved in NAD biosynthetic process. Predicted to act upstream of or within pyridine nucleotide biosynthetic process. Predicted to be active in mitochondrion and nucleus. Orthologous to human NMNAT3 (nicotinamide nucleotide adenylyltransferase 3).

NR:

description
nicotinamide/nicotinic acid mononucleotide adenylyltransferase 3 isoform X2

GO: NA

KEGG:

id description
K06210 NMNAT; nicotinamide mononucleotide adenylyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007228665.3 False 1088 mRNA 0.52 5 8097854 8123480
XM_007228666.3 False 1066 mRNA 0.53 5 8097854 8123292
XM_007228667.3 True 1133 mRNA 0.53 5 8097854 8123457

Neighbor

gene id symbol gene type direction distance location
rbp1 rbp1,LOC108442846 coding downstream 4725 8081916 ~ 8093129 (-)
LOC103046363 LOC108442840 coding downstream 32625 8061730 ~ 8065229 (-)
copb2 copb2,LOC107706339,LOC107567551,LOC107694662,LOC107583113,LOC107738120 coding downstream 37624 8038862 ~ 8060230 (-)
LOC103046059 NA coding downstream 60462 8031023 ~ 8037392 (-)
prmt5 prmt5,LOC107694666,LOC107558089,LOC107668985 coding downstream 943963 7134726 ~ 7153891 (-)
LOC103021520 spsb4a,LOC103021520,LOC108440634,LOC107583109,LOC108267127,LOC107706335,LOC107694659,LOC107561810 coding upstream 422010 8545490 ~ 8625989 (-)
LOC103022255 epha4,epha4a,LOC108440631,LOC107583108,LOC107668967,LOC107706332 coding upstream 862993 8986473 ~ 9067576 (-)
LOC103031272 NA coding upstream 1015314 9138794 ~ 9141090 (-)
LOC103042138 puf60a,LOC108413493,LOC108267407,LOC107599879,LOC107657443 coding upstream 1409343 9532823 ~ 9563587 (-)
LOC103042459 nrbp2a,nrbp2,LOC108413492,LOC108267406,LOC107733885,LOC107599881,LOC107657444 coding upstream 1450860 9574340 ~ 9672214 (-)
G139876 NA non-coding downstream 106 8096967 ~ 8097748 (-)
G139856 NA non-coding downstream 105276 7927095 ~ 7992578 (-)
G139852 carmil3 non-coding downstream 111086 7846496 ~ 7986768 (-)
G139855 NA non-coding downstream 193040 7902073 ~ 7904814 (-)
G139847 NA non-coding downstream 354492 7742978 ~ 7743362 (-)
G139891 NA non-coding upstream 98061 8221541 ~ 8247462 (-)
G139900 NA non-coding upstream 385551 8509031 ~ 8512618 (-)
G139924 NA non-coding upstream 541958 8665438 ~ 8668424 (-)
G139922 NA non-coding upstream 545860 8669340 ~ 8670612 (-)
G139941 NA non-coding upstream 622153 8745633 ~ 8749092 (-)
G139706 LOC108438927,LOC107558100,LOC106569426 other downstream 915071 7168965 ~ 7182783 (-)
LOC103041520 acin1,LOC106608850,LOC107591382 other downstream 1153720 6841980 ~ 6944134 (-)
lamc1 lamc1,LOC107658363,LOC107563558,LOC107678923,LOC107557259,LOC107722047,LOC106599430 other downstream 1408131 6564903 ~ 6689723 (-)
G139587 NA other downstream 1667535 6417385 ~ 6430319 (-)
G139487 NA other downstream 1723145 6304969 ~ 6374709 (-)
LOC103024234 slc25a36a,slc25a36,LOC108440632,LOC107668959,LOC107706334,LOC107694658,LOC107561809,LOC107561808 other upstream 547544 8671024 ~ 8711099 (-)
LOC103044908 LOC103045223,LOC108413497,LOC105899383 other upstream 1573675 9697155 ~ 9714037 (-)
G140342 NA other upstream 1911923 10035403 ~ 10103457 (-)
prkci prkci,LOC107668962,LOC107659412,LOC107706387,LOC107738175,LOC107591345 other upstream 2187617 10311097 ~ 10345498 (-)
G140472 slc4a2,LOC108413474,LOC107718031 other upstream 2387609 10511089 ~ 10514807 (-)

Expression


Co-expression Network