penk (penk)


Basic Information

Item Value
gene id penk
gene name penk
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 21509741 ~ 21527223 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007231067.3
TTAAAGAGTGGAGGGGTTTGGAGGAGCCAAGTTTACAGACCCCTACTCACACGCGCACGAGCCTCACTCACGATCAGAAGATCAGGAAGACTAAAGAAGCACAGAACTGAGGCTGAGGTGGAGAACAGACCGCCGTCACTGTGCgcatctccctttctctctctctctctctctctctttctctctctctctccggggAGTTTCAGTGACTCTTGGGGTTCCAGTTGAGCGCCACACCTCAGCGGCATCACACGGCGGCGGGACTGAAGAAGACCCCGATCCGAGAGTGATGAAGATGAAGACCTCAGTGGTGCTGGTGAGCTCCAGGTGGgcgctgctggtgctggtgttGGCCGCGTGGCTCGCGCTCTCGGCGCGCGCGGACTGCGAGGTGGATTGCGCGCGCTGCTCCGGGCGCCTGTGGCTTCAGCAAACGCGGATCAGCTCCATAGCATGTGTGCTGCAGTGCGAGGGGCGCCTAAATGTTGGCAGCTCTTGGGGCTTGTGTCGGGGTCTCCTGCAGGGCACCGAAAGCACACCACCGGAAGATGAACGAGAAATGACAGAAAATGGGCCCCAACAGCAGCACCAGGAGGAGAAAAAATACGGGGGTTTCATAAAGAGATACGGAGGTTTTATGAAGCGTTACGGAGGCTTTATGAAACGATACGGGGGCTTCATGAAGAAGGCAGCGGAACTCTATGCCCTGGAGCCAGATGATGTCGACCGTGGGCGAGAAATTCTGTCCAACAGTGACGTAGAAGTTCTGGCTAATCAGGTGGAAGACGACAGCGAAAGGGAGGAAACCGCCAGAAGGGACTTTCTAAATGCAAGGGGAGGGGCTACAGGGTTAGAGGGCGTGGAGAAGCGATATGGCGGATTTATGAGGAGAGCTTTTGACTCTGAGGGTCAGAGGCCATTACAGAAGCGCTACGGGGGCTTCATGAGGCGAGTGGGCCGGCCAGAGTGGGGGGAGGAGATCAAACGCTACGGAGGTTTCCTCAAACGCTCCCCACAGGAAGACGAAGAGGAGAATGAAGAGGACGAGGAGGAGTCGTTGGAGATGGAGAAGAGATATGGGGGTTTTATGGGATTTTGAATTTCTCGCAGACTTTGGTTAGCCATTAACTGTCGTGTTCTGTTCCATTCTGTTCTCCAAATCCTAGAAGCTACCTTGTGATCACAGCAGAAGTAAAAACAAAACCATGCTTACAGAGCTGacactatgtttaaaaaatgttcataaggtCCTTGTAGTACTAACTGATGTGAATGTGAACAAGACACACTCAAAGAGGGTATAGGGCTTAATGGTGGGTAGCTTGTTTTTGACAGATGCAAGCTTGTGCAGCCCAATTACACAGTAATAAGATAATAACGGTAATTTCTGTAATTATCTCCGGGCTGTCCGTTTCTTCATTTGTCTTTTAAATCCTCTTTCCTCAGCCTCACCACAGTCAAAGCCTTTAGTTTTTTACGCAATTAGTTAAAAGACAAGACTAGCGACAGAATGAAGTACTGACTAAACAGGGTAGAACACACTGTTTATTAGTCCACAGCAAAGTGATTCCCCCCTCAGCGCCTTTATTTCTCACAGTCTGTTGTTCTGGTGTCAGTCCTCATTTGTCATATGTTGTACAGCTTGAATAAACTGCTCGAAACTGCAA

Function

symbol description
penk Predicted to enable opioid receptor binding activity. Predicted to be involved in chemical synaptic transmission; neuropeptide signaling pathway; and sensory perception. Predicted to act upstream of or within several processes, including behavioral fear response; sensory perception of pain; and startle response. Predicted to be located in endoplasmic reticulum lumen and extracellular region. Predicted to be active in several cellular components, including axon terminus; cytoplasmic vesicle lumen; and neuronal cell body.

NR:

description
PREDICTED: proenkephalin-A

GO: NA

KEGG:

id description
K18832 PENK; proenkephalin A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007231067.3 True 1667 mRNA 0.51 3 21509741 21527223

Neighbor

gene id symbol gene type direction distance location
LOC111194246 LOC108436149,LOC108267579 coding upstream 160109 21339580 ~ 21349632 (+)
LOC103043942 LOC108436149 coding upstream 171009 21333746 ~ 21338732 (+)
LOC103041877 camk2d1,LOC107561529,LOC107730106,LOC107698678,LOC108436151,LOC108267517,LOC107732596 coding upstream 501735 20888963 ~ 21008006 (+)
LOC111194340 NA coding upstream 696897 20803300 ~ 20812844 (+)
LOC103044091 adcy1,LOC103368946,LOC102227141,LOC107721119 coding upstream 735586 20715544 ~ 20774155 (+)
LOC103045570 sdr16c5,LOC108436143 coding downstream 3118 21530341 ~ 21562050 (+)
rps20 rps20 coding downstream 64817 21592040 ~ 21598440 (+)
LOC103047292 tmem68,LOC107584594 coding downstream 97170 21624393 ~ 21632573 (+)
lypla1 lypla1,lypa1 coding downstream 191098 21718321 ~ 21724125 (+)
LOC111194247 NA coding downstream 213018 21740241 ~ 21747485 (+)
G143058 NA non-coding upstream 49380 21459895 ~ 21460361 (+)
G143052 NA non-coding upstream 59694 21449795 ~ 21450047 (+)
G143034 sdcbp non-coding upstream 105066 21395691 ~ 21404675 (+)
G143020 asph non-coding upstream 119816 21362598 ~ 21389925 (+)
G143010 nsmaf,LOC107739938 non-coding upstream 184882 21320890 ~ 21324859 (+)
G143112 NA non-coding downstream 54201 21581424 ~ 21582666 (+)
G143114 NA non-coding downstream 107019 21634242 ~ 21642858 (+)
LOC111194179 NA non-coding downstream 128556 21655779 ~ 21658620 (+)
G143127 NA non-coding downstream 173599 21700822 ~ 21701945 (+)
G143172 mrpl15 non-coding downstream 184143 21711366 ~ 21715175 (+)
G142820 NA other upstream 719619 20782583 ~ 20790122 (+)
rnf138 NA other upstream 1289592 20202648 ~ 20220149 (+)
G142620 NA other upstream 1641449 19736306 ~ 19868292 (+)
G142378 gpaa1 other upstream 2616232 18856236 ~ 18893509 (+)
plag1 plag1,LOC107730125,LOC107698667,LOC107660303,LOC107705642,LOC107570428 other downstream 41859 21569082 ~ 21579724 (+)
LOC103047556 LOC108436107,LOC108267807 other downstream 71459 21598682 ~ 21611682 (+)
G143122 LOC108436138 other downstream 118682 21645905 ~ 21646705 (+)
G143182 mlrn,LOC103039566,LOC106517213,LOC104925296,LOC105008240,LOC106578694 other downstream 284068 21811291 ~ 21908314 (+)
G143324 NA other downstream 1008462 22535685 ~ 22610447 (+)

Expression


Co-expression Network