G41637


Basic Information

Item Value
gene id G41637
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 3567598 ~ 3567975 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU47262
TTTTGTAAGAAAAATATCCATAAATATAAACAAAATTTTATAATCTAAAATAACTAGCTTCCGCCAGACGACCGTACACATACCGCGCAAGTCGACTTGTGTCAAATGAGTACCCCCACATGATGCAAATAGGACCGGGCAACAGACTCAAGCTCCTCTTCTCTTATATCAAAATCCCCTGACATTTCTCTTTAAAAATTCTCATTTTAGACTTCTAATTCGTGACCGATGTTTTGTTTTGCTCTATCTTCTGCGTTTCCACGGTCAGAGTTCAAACTGATGCGTACGGCCATCTGCCGGAAGCTAGTTATTTTACTTTATAAAGTTTTAATTATGGATATTTTTCTTACAAACCCCATCGCTTTGTTTCAGAAGGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47262 True 378 lncRNA 0.38 1 3567598 3567975

Neighbor

gene id symbol gene type direction distance location
CI01000006_03548703_03554763 PPP1R14BA, PPP1R14B coding upstream 12835 3548703 ~ 3554763 (+)
CI01000006_03483581_03526564 SLC8A4A coding upstream 40396 3483581 ~ 3527202 (+)
CI01000006_03446979_03447865 NA coding upstream 119682 3446979 ~ 3447916 (+)
CI01000006_03441003_03442001 NA coding upstream 124643 3440656 ~ 3442955 (+)
CI01000006_03412397_03437333 MARK2A coding upstream 129888 3412397 ~ 3437710 (+)
CI01000006_03607868_03614573 LRFN4A coding downstream 39280 3607255 ~ 3614935 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L coding downstream 166579 3734554 ~ 3736035 (+)
CI01000006_03744756_03759381 NA coding downstream 176349 3744324 ~ 3759825 (+)
CI01000006_03760594_03770397 NXF1 coding downstream 192300 3760275 ~ 3770797 (+)
CI01000006_03808166_03810807 NA coding downstream 240110 3808085 ~ 3810807 (+)
G41635 NA non-coding upstream 7519 3559768 ~ 3560079 (+)
G41634 NA non-coding upstream 7936 3559438 ~ 3559662 (+)
G41632 NA non-coding upstream 19423 3547958 ~ 3548175 (+)
G41519 NA non-coding upstream 34579 3531765 ~ 3533019 (+)
G41566 NA non-coding upstream 112563 3449450 ~ 3455035 (+)
G41672 NA non-coding downstream 74844 3642819 ~ 3644239 (+)
G41498 NA non-coding downstream 135645 3703620 ~ 3721669 (+)
G41561 NA non-coding downstream 144758 3712733 ~ 3772724 (+)
G41523 NA non-coding downstream 157891 3725866 ~ 3726499 (+)
G41591 NA other upstream 728177 2836167 ~ 2839421 (+)
G41424 NA other upstream 907028 2645662 ~ 2660570 (+)
G41170 NA other upstream 1871777 1692065 ~ 1695821 (+)
G40768 NA other upstream 3074572 488407 ~ 493026 (+)
G40767 NA other upstream 3084263 360009 ~ 484185 (+)
G41996 NA other downstream 1549231 5117206 ~ 5124149 (+)
G43896 NA other downstream 2202114 5770089 ~ 5771775 (+)
CI01000006_06104927_06109730 NA other downstream 2540509 6104927 ~ 6109820 (+)
CI01000006_06122278_06122736 NA other downstream 2554060 6122035 ~ 6122751 (+)

Expression


Co-expression Network