emilin2


Basic Information

Item Value
gene id emilin2
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 23255677 ~ 23290625 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007238909.3
ACTCAAGGGGAGGGGCTTTAAGCCCATCTGTGTTTCTCACAGTCAGGACCCTCAGAAGCCTGAGCAGCTCCAGAGCCTGtggtgctgagtgtgtgttctctgtctgcgctgtgctgtgctgtgtctgtggtgtgtgtgtctgcagggtgagatgaagtgtgtgtgctgtggggACCGGGggctgctgctaatgctaatgctgatggtGATGCTAATGATGGTTCCTCTGGTTCACGGAACTCCGTCCAGATTCAGTTTATTCCAGGGATCTCCATACTCCAGCAACCCTCACCAGCAGAGGAACAAGAACTGGTGTGCGTTCGTGGTGCACAGGAACGTGACCTGCGCTGTGCTGGACACCGAGAGTGTTGCCCCCTGTCCCCCACATCAACCCCACTGCGCACAGAGCCTCATGTACCGTACTCACATGAGGCCCATGTACAAAATTGGCTACAAGCAGGTGACTGAGCTGGAGTGGAGATGCTGCCCTGGTTACCGCGGTCACAACTGCATGGAGCTCAAAGATGTTCCATCCTCTCCTCAGATACTTCAAGAACCACGACCAGAGATTTCATCCATTCATGGGCAGCAGCCGAGTGCCCTCGGACCAGAAATCTTCTCTGGTGGTCGTCCTTGGACACATTCTGGGCAGAGTGGACAACCCAAGCAACCCTGGATTGAGGGTGGAGATTCTGGAGATTCTAGACTGAGGGGTCATCAGGATAGTCATCGAGTTCAGGAGTTAGAAGAGGAAGTGCAGCGTCTTTCTCAAACAGTGCTTGACTTGCAGTCGGCCATGACCTCTAACAATGCTAACTTGCGCCTTGACCTGCAAGAAGATGCAAGCAAGATCATTCTGAACCTGCTCGGTAACTTGCGGCAGCCGCAGGGTGCCCTAACTGGTGGCACTGAGAGCATCCTGCTTCCCTCAGATATCCCACTTTTTCCAGCCACAGATGAGCTTCAGAATCAGGTTACCCATCTTTCCAACACAATCAGCACAAACACCAACTCTATCCAGGATCTGGAGTCTAAGCTCTTGCAGCTTGAAGGACATGTGAATAAGCTAACAGAGGTAGAAGGCGATACAACAGTTCCACTCCCTTCTTCTGCCTCAACGACTGAGTGCCCGTGCCAGGCTTACATTGACCAAAAGGTTGAAGCACTACGTACAGAGCTGATGGAAGGAATGGACATTAAGATGGCTGATTTGAAGAACGCTTGTGACTACAAAGTGCTGTCAGTTAAGGAACAGTGCGAAGAACAAGAAAACTCCTATCTAAGTCTTGCAGAGCTTCTGGATTCCAAAGAGGCAGACCTTCGCCAAGAGATCCAGGACCTACGGAGCTTTATTTCAACAGGTGCCCCCTATGGGTCGGTGGTCCCAGACTTACAAACGAAGATCCAGAACCTGAAAAATGCTCATAATAACTTGGCTAGTGCTGTAAATGCAACAGTGCTGAAGCAGAAGACTCGAGAAGATGCTCTAGAGGTGAGGGTTTCCATGGCGGAAAGGGGTGCAGAAAAGTGTTGCCTCAGCCTGGAAGAAAAGTTGCGGAGGGAGAGAGCAAAGGAAGAGGAGGCACAAACCAAAGCACTGGAGAGCAAAATCAATGCAGCTCTACAAGTAATTGGAGGCACACAGTCTCAAGCGAGAATAACAGGTGACGCCAACGGCCAGAATATAATTGAGATGGATTTGCAAACCGAGATTTTAAGAGATGACGTGAACTCTCTTGTAGAGCAGGTCAGAAATTTGGACAACTCCGTCAAAACCCTTAACCAGTCACTCGTCCATCAGAATCAAATGAATAACCTGTATAATAGACTAGATAAACTGGAGGAAGATTGTGGGAAGGGCCAAGACTTTGCCAAAAGACTTGAGGAGGTTTTGTCTGGGGTCGATGGACGGGTATCCAGTATTGAAAGTGTTTGTGGCAGGCTGGAGCCCATGTCGGACAGTCTAATGAGAATCAAAGATGGGCTGAACAAGCATGTGAATGGTCTTTGGAACTGCTTTCGACAGCTCAACAGCACCGTCCTTACTCACTCAACAGACATAAACACTCTGAGGGCAAATACCCACATCACTGTGGGCAAGCCGGATGGAGCCACCAGCACACCAAAATACACAGgtgTTCAGGCTAGTAAGAAGGACTCTGATGTTGCCATGGCGACAGGCTCTACTCCTACTGTTGTGGAGTTTGGGGAAGCTGGACCACCCGGTACAAAGCTTTCGTCCCGACCCCCTCAGGGGACCAATGGCAGTATGACACCTGTTAAGGGCTATGCTGCAGCCCCAGGCTATCCTGCCATGCCCCCTGTCTCCATCACACCTCATATTCTTTCAGgtcatACGAGTGAAAGCGCCGCCCCTGCATCTTTTTCGGCTGGTCTCACCCTCTTACCATTTTCTGGAAATGTTGGCATCATCCGCTTCAACCAAGTGCTGCTGAATGATGGAGGACACTATGACCCACATACAggtATATTCACTGTTCCCACCAACGGACGGTACCTGCTGAGCGTTGTCATAACAGCCCAAAAGGGAGAACGTCTGGAAGCAGTCCTCTCAGTGGCCAATCGCAGCATCCAGAAGCTCGACACATCAGGGGGTGTGGCCTCAGCTGAGTGTCTCTGTGGAGGCTCAGCCTCAGCTAACCTGGTTCTTGATCTTAAGCAGGGTCAGAAAGTGGCAGTGGTAATGACGTCTGGAACGCTAGCGATTTCAGCATCCACTGAAGCTCTTTCCACGTTTAGCGGAGTTCTGCTACACCCTCTACCTGCTAAAAGATAACCTTCAGCCGAAGATACACATCAGAGTTCAACAGTTTTCAATGCCATGTCAGAGCTTTAATAGCACTGGGTAGATGGGCTCTTGAGTAACACTTGAATAAGGGGGTCATGTTTTGGAGAGGCTAAATTTTCAGTTGAATGCTGCATACAGGTATACAGCTTTGTGAACTTTTAAAaaggacatattatgcaaaactcactttttgtgtgcttttgtattttcgCTTGGGTCTAAACTGCCCCTACAAACATTTTAAGCatagaaaaaaatccatccatactTTTTCTGTGATTCGGTTAAAAGAGTTTGATGTCAGGAATCATAGTGCTGATAGGATCTGTTTAGATGGCTCCTTTATTAGAACATCACAAACCACTAGATCATGTAAAGAAACACCATTTCAGTCAATTTGCTTAAAACCCTCAGACAGTACggcatcagctgctggagtcctgagagagcacaattggccttgctctctctgggtgggtagatggcgctctttcccctcatcaagGGTGATATCAATCAGCACAAGCCATCTAAACCATGAGCTCATGAATAGGAACCGagtctgcatcagcagcagtttgaaaagagccagtagctggcttcacatgtgttagtcttcactctcctggtgttggggcattactagtgataggggaagtcccagtgagtgggttggctaattggccttgtaaatcggtaagaaaatgggacaaaaaaaaagcagaaatactCAGCAGACTTCGTCCGACGAAGGGATCTGTGGCAGGTCAGGGtgtgtctgtggcaagtcagtaTATGAGGGAGGTGTTAAGTACTTTTAAGTAATGActtttgtgtttctattgcaGTTGAGCATGAACTATCTTGTTCGTGTTTTGGCATTTAGCAGACTAATGTTTGGTACAAGCTCGGCATAAAAATTGCGTAGCCAGCAAaggtttatttgcataaaagtgacagagcccttaaatagCTATTTCTTAAAGAaactaaaacagattttttaatgcaaagaactttgtgaacatgttttctatagcccatagacctattttaactagtgtaaaaatAGGTATAATATGTCCTCTTTAAAGGTCAGTCATGTGATGCCCCCAGTCACACTCTCTCCCACATTGACACTGTTCTAGAAAGTTCTCcctacatttacactgttaaatATTGTTCCCGTATTCACACTGTTAAATAATAATCTcctttattattactgtttttgaATGCCTCCATACATGTATTACCTATTCATACCATACACGCAGTTCTACAATATTCTGTCCTACATGATTTTCTACTCTTCTTCACAGTTGGTGGCTTATTTGCCTTGTTCTTGAATGTTCTCTCCACACAGCCCTCAAGAACATTTAAACTATTCTAAAAAGATACacttttttgaaaagaaaaaaaaaaacatcctgaaTGTAAACACTCAatcatatttcattttataaatacagtttactgtgtgtgtgtgcctgtgcgAATGTGTGAAtgctaatagttttttttttatactgtgtaacactagattttttttgttacttaaaTCAACAGCCAAACTACAGAAAATCTACTGTATATCACAAACAATATGAATGTTCAGATgtcttatttaatataaagcatTATTGGAAATGTTCATGTTACATGTATGTAATGTTTGCAATGCGATAAGCAAACTGTAAACCATTTTTTGAAACTCTGTCAAAAGgggttattaaaacatttataacagaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007238909.3 True 4561 mRNA 0.45 8 23255677 23290625

Neighbor

gene id symbol gene type direction distance location
smchd1 smchd1 coding upstream 4931 23190464 ~ 23250746 (+)
trnaa-cgc_2 NA coding upstream 190319 23065287 ~ 23065358 (+)
trnat-cgu NA coding upstream 190578 23065028 ~ 23065099 (+)
adcyap1 adcyap1 coding upstream 233265 23016781 ~ 23022412 (+)
LOC103031382 NA coding upstream 251683 22991462 ~ 23003994 (+)
LOC103023765 NA coding downstream 144969 23435594 ~ 23442090 (+)
LOC103024399 pde5a,pde5ab coding downstream 282178 23572803 ~ 23664047 (+)
LOC103024717 LOC108436153,LOC108267195,LOC107730122,LOC559800,LOC107698664,LOC107559837 coding downstream 419883 23710508 ~ 23734928 (+)
LOC103035300 cacnb2,LOC102289395 coding downstream 489627 23780252 ~ 23905504 (+)
arl5b arl5b,LOC103034648,LOC100708858,LOC107591025,LOC103373092 coding downstream 655478 23946103 ~ 23971572 (+)
G143694 NA non-coding upstream 66441 23187028 ~ 23189236 (+)
LOC111194181 NA non-coding upstream 70413 23181717 ~ 23185264 (+)
LOC111194176 NA non-coding upstream 80877 23172948 ~ 23174800 (+)
G143691 NA non-coding upstream 81889 23170596 ~ 23173788 (+)
LOC111194177 NA non-coding upstream 83318 23170450 ~ 23172359 (+)
G143684 NA non-coding downstream 687 23291312 ~ 23291924 (+)
G143698 NA non-coding downstream 2367 23292992 ~ 23293214 (+)
G143699 NA non-coding downstream 3441 23294066 ~ 23294388 (+)
G143701 NA non-coding downstream 4848 23295473 ~ 23295859 (+)
G143702 NA non-coding downstream 7185 23297810 ~ 23298390 (+)
G143324 NA other upstream 645230 22535685 ~ 22610447 (+)
G143182 mlrn,LOC103039566,LOC106517213,LOC104925296,LOC105008240,LOC106578694 other upstream 1347363 21811291 ~ 21908314 (+)
G143122 LOC108436138 other upstream 1608972 21645905 ~ 21646705 (+)
LOC103047556 LOC108436107,LOC108267807 other upstream 1643995 21598682 ~ 21611682 (+)
plag1 plag1,LOC107730125,LOC107698667,LOC107660303,LOC107705642,LOC107570428 other upstream 1675953 21569082 ~ 21579724 (+)
LOC111194251 NA other downstream 94543 23385168 ~ 23395240 (+)
LOC111194174 NA other downstream 113063 23403688 ~ 23406894 (+)
G143836 NA other downstream 537323 23827948 ~ 23916082 (+)
ppp3ca ppp3ca,LOC103369319 other downstream 1145754 24436379 ~ 24602402 (+)
G144017 NA other downstream 1416458 24707083 ~ 24711533 (+)

Expression


Co-expression Network