G41716


Basic Information

Item Value
gene id G41716
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 3776605 ~ 3776903 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU47341
CTCATGCCGTTCCACACCCGTAAGACCTTCGTTCATCTTCGGAACGCAAATAAGGATATTTTTGTTGAAATCCGATGGCTCAATGAGGCCTCCATAGCCAGCAATGACATTTCCTCTCTCAAGATCCATTAATGTACTAAAAACATATTTAAATCAGTTCATGTGAGTACAGTGGTTCAATATTAATATTATAAAGCGACGAGAATATTTTTGGTGCACCAAAAAAAACAAAATAATGACTTATATAGTGATGGCAGATTTCAAAACACTGCTTCAGGAAGATCTGGAGCGTTATGAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47341 True 299 lncRNA 0.39 1 3776605 3776903

Neighbor

gene id symbol gene type direction distance location
CI01000006_03760594_03770397 NXF1 coding upstream 5808 3760275 ~ 3770797 (+)
CI01000006_03744756_03759381 NA coding upstream 16780 3744324 ~ 3759825 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L coding upstream 40867 3734554 ~ 3736035 (+)
CI01000006_03607868_03614573 LRFN4A coding upstream 161670 3607255 ~ 3614935 (+)
CI01000006_03548703_03554763 PPP1R14BA, PPP1R14B coding upstream 221842 3548703 ~ 3554763 (+)
CI01000006_03808166_03810807 NA coding downstream 31182 3808085 ~ 3810807 (+)
CI01000006_03837017_03839129 NA coding downstream 60114 3837017 ~ 3839251 (+)
CI01000006_03858455_03862082 RCE1B coding downstream 81552 3858455 ~ 3862368 (+)
CI01000006_03883341_03885377 NA coding downstream 105886 3882789 ~ 3886026 (+)
CI01000006_03888048_03891012 NA coding downstream 110470 3887373 ~ 3891478 (+)
G41561 NA non-coding upstream 3881 3712733 ~ 3772724 (+)
G41548 NA non-coding upstream 34109 3740194 ~ 3742496 (+)
G41523 NA non-coding upstream 50106 3725866 ~ 3726499 (+)
G41498 NA non-coding upstream 54936 3703620 ~ 3721669 (+)
G41729 NA non-coding downstream 54001 3830904 ~ 3831126 (+)
G41732 NA non-coding downstream 62848 3839751 ~ 3840006 (+)
G41743 NA non-coding downstream 72890 3849793 ~ 3850026 (+)
G41499 NA non-coding downstream 73566 3850469 ~ 3853876 (+)
G41744 NA non-coding downstream 87228 3864131 ~ 3864359 (+)
G41591 NA other upstream 937184 2836167 ~ 2839421 (+)
G41424 NA other upstream 1116035 2645662 ~ 2660570 (+)
G41170 NA other upstream 2080784 1692065 ~ 1695821 (+)
G40768 NA other upstream 3283579 488407 ~ 493026 (+)
G41996 NA other downstream 1340303 5117206 ~ 5124149 (+)
G43896 NA other downstream 1993186 5770089 ~ 5771775 (+)
CI01000006_06104927_06109730 NA other downstream 2331581 6104927 ~ 6109820 (+)
CI01000006_06122278_06122736 NA other downstream 2345132 6122035 ~ 6122751 (+)
CI01000006_07167131_07168925 NA other downstream 3389886 7166778 ~ 7168925 (+)

Expression


Co-expression Network