rwdd4 (rwdd4)


Basic Information

Item Value
gene id rwdd4
gene name rwdd4
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 34376722 ~ 34383744 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007242050.3
CTCAGCCGGGTTTTTGGAGTTCACTGAAGAAACTGCTGGTTAAATCTTGCTGGGCAGCATGAGTTGTTCAGGCTGCCCATTTAAATCCTGTTTTAGTAGTAGAACACAGAGAGAGCTGATTTAGCTGGGTTTGATATTTGAGTGGGAGAAACAGCAGGAGGAGCTGGCAGACTGCTGAGGAGTTAATCATGACTGCTAACGAGGAGCAGGAGATGGAGTTGGAGGCTCTGAGGTCAATTTATGAAGGAGACGAGTGTTTCAAAGAGCTCAGCCCTGTGTCCTTTCAGTTCAGGGTTGGAGACCATGACGAGTCCAAATCATTCCTACTGGATGTCTCATGGCCAGAGACGTATCCTGAAACCGAACCTCATTTATCCCTAGATGCCTTTTTTAACAACAGAATCTCTCCAGATATCAAGCAGCTAATACTCTCTAAGCTGCAAGAGCAGGTGGAGTTAAACCTGGGCACTGCAATGATGTACACACTATTTGAATGGGCCAAAGAGAACCAGGAGATGCTCATGGAGAATCACCAGCCAGTAGTGTCTGCTGTGACCCTGACCTCTACCACTGAGACAAATAGTCCAGTGTCTGCCataaagaaaaaggagaagaaggaaCAACTAACAAAGGCACAGAAACGGAAAATGATAGGAAGAACTGATAATAAAGGCGAACTGCCCAGAGGTTGGAATTGGGTTGATGTTATTAAGCATCTGAGCAAAACAGGAGGCAAGGAGGATGGCTAGAAAAACAACTGCAGAAGGCTAAATGAATGGAAGGCGATAcggatgaatggaccaatggaCACGGAAAGTCGGACATGACTGGTTTTAAAGAAAGTTTAAATGAGTTCTCTAGCCATGATTTCAATACACTTGAAGCTACCGTTTTGTTTGTGTCACCAATACAAGAAGACACAGATAtggatgtgtcaaaatgtcCTTTGCCACAAGGACAGACTTCTTATAGTACTTTCACTAAAATGGTAGTGacttttaatgagcgaaatgcTGTTTAGTCAGCATGAAATTCATGGAGTGTCTGAGAGAAAGACCATGTTGAGGGAAGACTCAGGTCCAGTGTCTTCAAACTGAGAGGCTTTATGTACCATGTTATCAGCCAGCCAGGCTGCAGTTCACATAACACTGACAGCTAAAAAATGATAACATTGACATTTTATGGTGCAGTGCAGTTTGATCAGGTGACCTTCAGTTTGTATTTGTACCTGTTTTTAGCCTGTTGCTTTCtcttttcagttatttattgTAGTACCTCTCTTGACACAATATTAAAATCTTATGGAAGTTTC

Function

symbol description
rwdd4 Orthologous to human RWDD4 (RWD domain containing 4).

NR:

description
PREDICTED: RWD domain-containing protein 4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007242050.3 True 1312 mRNA 0.43 8 34376722 34383744

Neighbor

gene id symbol gene type direction distance location
LOC103039994 NA coding upstream 184762 34189634 ~ 34191960 (+)
LOC103032728 lrch4,LOC108428567,LOC107661958 coding upstream 206477 34115141 ~ 34170245 (+)
LOC103033595 per1b,per1,LOC108428562,LOC107711564,LOC107684947,LOC107557521,LOC107677837 coding upstream 314755 34028450 ~ 34061967 (+)
dthd1 NA coding upstream 351349 34012482 ~ 34025373 (+)
stim2 stim2,LOC107707336,LOC107661953,LOC107684943,LOC107757910 coding upstream 2374239 31934723 ~ 32002483 (+)
LOC103032224 LOC107583291 coding downstream 1586 34385330 ~ 34423139 (+)
LOC103039377 pcxb,LOC108428573,LOC108267638,LOC108412801,LOC107661088,LOC107721657,LOC107583287 coding downstream 297554 34681298 ~ 35048688 (+)
LOC103029357 plcb3,LOC108428576,LOC108267602 coding downstream 812512 35196256 ~ 35273019 (+)
LOC103027680 paip2b,LOC103027680,LOC108428580,LOC108263850 coding downstream 1078967 35462711 ~ 35478752 (+)
LOC103027364 dok1 coding downstream 1109901 35493645 ~ 35517535 (+)
G146284 NA non-coding upstream 164479 34180258 ~ 34212243 (+)
G146296 NA non-coding upstream 165401 34209142 ~ 34211321 (+)
G146269 NA non-coding upstream 175523 34076204 ~ 34201199 (+)
G146265 NA non-coding upstream 311213 34029326 ~ 34065509 (+)
G146243 NA non-coding upstream 472433 33882808 ~ 33904289 (+)
G146424 NA non-coding downstream 205223 34588967 ~ 34589166 (+)
G146441 NA non-coding downstream 370178 34753922 ~ 34754396 (+)
G146457 ppp1r14b,LOC108268202 non-coding downstream 710617 35094361 ~ 35226268 (+)
G146466 NA non-coding downstream 826641 35210385 ~ 35274100 (+)
G146475 slc8a4b,LOC108428577,LOC107569310,LOC107744276,LOC107721660,LOC107661969,LOC107583282,LOC108267603 non-coding downstream 898976 35282720 ~ 35293044 (+)
LOC103033902 pcolce2,pcolceb,LOC108428564,LOC107711558,LOC107557504,LOC107677833,LOC107750313 other upstream 298747 34067581 ~ 34077975 (+)
pcdh7 pcdh7,LOC107568147,LOC107684944,LOC107561555,LOC107681559,LOC107753999 other upstream 1272493 32879690 ~ 33104229 (+)
G146104 NA other upstream 1764160 32612125 ~ 32612562 (+)
trnae-uuc_22 NA other upstream 2305159 32071314 ~ 32071563 (+)
tbc1d19 tbc1d19,LOC107660707 other upstream 2450172 31892526 ~ 31926550 (+)
cct7 cct7,LOC107697251,LOC107721663,LOC107583281,LOC107744273,LOC107691460,LOC107571935,LOC102781788 other downstream 1016034 35399778 ~ 35406330 (+)
G146805 acadvl,LOC107731915,LOC107595296,LOC107675499 other downstream 2107768 36491512 ~ 36494457 (+)
acap1 acap1,LOC107595305,LOC107731905,LOC107683535,LOC107675497 other downstream 2306949 36690693 ~ 36719287 (+)
c16h4orf48 cunh4orf48 other downstream 2655191 37038935 ~ 37042227 (+)
G147496 NA other downstream 4231134 38614878 ~ 38615355 (+)

Expression


Co-expression Network