G41729


Basic Information

Item Value
gene id G41729
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 3830904 ~ 3831126 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU47357
AAAAAAAAAAAGAAAAAAAGAAGAAAAAAAAAAGAACTGTAAAAGCCATGTCAGTTATTCCAGAGTGTGATGTTACATCCAAAACACCATGCATGATTACCTTTGATATTTACTCCGTCTATATGACAGTTCTCTTTATATGTTTTTTATGACGATGGAAAGTGATGATGCACCGAGTTCCTCTGGAATATCTACAACTATATTATATCGCAGTGGACAGATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47357 True 223 lncRNA 0.44 1 3830904 3831126

Neighbor

gene id symbol gene type direction distance location
CI01000006_03808166_03810807 NA coding upstream 20097 3808085 ~ 3810807 (+)
CI01000006_03760594_03770397 NXF1 coding upstream 60107 3760275 ~ 3770797 (+)
CI01000006_03744756_03759381 NA coding upstream 71079 3744324 ~ 3759825 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L coding upstream 95166 3734554 ~ 3736035 (+)
CI01000006_03607868_03614573 LRFN4A coding upstream 215969 3607255 ~ 3614935 (+)
CI01000006_03837017_03839129 NA coding downstream 5891 3837017 ~ 3839251 (+)
CI01000006_03858455_03862082 RCE1B coding downstream 27329 3858455 ~ 3862368 (+)
CI01000006_03883341_03885377 NA coding downstream 51663 3882789 ~ 3886026 (+)
CI01000006_03888048_03891012 NA coding downstream 56247 3887373 ~ 3891478 (+)
CI01000006_03893432_03940454 ANKHD1 coding downstream 62306 3893432 ~ 3940961 (+)
G41716 NA non-coding upstream 54001 3776605 ~ 3776903 (+)
G41561 NA non-coding upstream 58180 3712733 ~ 3772724 (+)
G41548 NA non-coding upstream 88408 3740194 ~ 3742496 (+)
G41523 NA non-coding upstream 104405 3725866 ~ 3726499 (+)
G41732 NA non-coding downstream 8625 3839751 ~ 3840006 (+)
G41743 NA non-coding downstream 18667 3849793 ~ 3850026 (+)
G41499 NA non-coding downstream 19343 3850469 ~ 3853876 (+)
G41744 NA non-coding downstream 33005 3864131 ~ 3864359 (+)
G41747 NA non-coding downstream 39033 3870159 ~ 3871229 (+)
G41591 NA other upstream 991483 2836167 ~ 2839421 (+)
G41424 NA other upstream 1170334 2645662 ~ 2660570 (+)
G41170 NA other upstream 2135083 1692065 ~ 1695821 (+)
G40768 NA other upstream 3337878 488407 ~ 493026 (+)
G41996 NA other downstream 1286080 5117206 ~ 5124149 (+)
G43896 NA other downstream 1938963 5770089 ~ 5771775 (+)
CI01000006_06104927_06109730 NA other downstream 2277358 6104927 ~ 6109820 (+)
CI01000006_06122278_06122736 NA other downstream 2290909 6122035 ~ 6122751 (+)
CI01000006_07167131_07168925 NA other downstream 3335663 7166778 ~ 7168925 (+)

Expression


Co-expression Network