LOC103032447 (LOC108428553,LOC106608959,LOC103364796)


Basic Information

Item Value
gene id LOC103032447
gene name LOC108428553,LOC106608959,LOC103364796
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 31684228 ~ 31707955 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007248006.3
GTTTACAGGAGCTGCTGAGCGGCGGAGAGGTGGCGGTGAAGCCGCGAGGGAGAGCAGAGCGGCCGGTTAGAGGGTGCAGAGAGCCGCTTAGAGACAGAGAACAGCACGaTGGCAGATTATGAGTTGGTGAAGAAGATGCTGAGGGCAATTCTGCAGTCCAGTAAGTCCGGGCTGCCCCTGTCTCGCCTGCAGGCCGAATATAAGGAGCTGACAGGTGAAGCCATACCCCACAAGCAGCTGGGTCATGCCACTCTGGATACTTTACTGCACAGCATGTCCTCTGTGGTGCGGCTGGACAGGGGCCGCTCCGGGGAGGTGATGTGTTATGCCACAGTTGGGAATGAGATGGCTCACATTACAAAACTAGCGGCTCGTCATCATACGGCTAAGAAGACTGGTCGGCCTCAGGTGGTCAACTGTCAGATGAGAGTCAAGCCCTCTGCTCCTCTTGTATTAAATGCCAAACCCAGGACATCTCTAAGGCAGCCTGAGCACCGGGGTCGCCAGGGGCGTGGTGGGGGTCGCCCAGGGGGTCATGGTGACTCTCGTCCGGGAAGCATGAGGGAGCAACAGCCTGATGGGAAAGGCTCTAAACCACACAgtacccaacacacaccacccAACACGCCCACCAGAAGACCCAACCTGCCCTCTGACAGATCAGACAAAAGGATGACATTGCCATCCAGATTCCAAAAAGAAGTCCATGCCCACCTGTCTAGAAACCCTCAGCAGAGCAATGCTCCTTTCAACCTGAATGAAAGCACCACTCCACCAAAACCCAGGACACCCCATTCAAGCCCCTACAGTCCCAAACTGGTTCAGTCCCGCCTCAAAGAGGTTCTAAGCAAGCACAGCAATGGCTTATGGGTGTCTAAGCTTCCACAATTGTACCGCGAGCTTTACAAGCAAGACCTGCCCAGTGAAGCCTTGAAAGATCTGGAGGAGTGGACACATATTTGCACAATTGAGAAACCATGCAGTAGCAAACCTCAAGAGCTACTGCTGTACCCTGCTAAAGACATCAGCCAAACCACGACCCCGCCTAGCCCTGCCATGACTCCTACTGCAAACAAGCAGTCTCCACCCACCCAAAAGCCCCCCAGCCAGATACAGCAAGCAGCAAGAACACCCCCAACATCCACATCCAGCCCTCCCGCGTCTCCCACAGTTCTGCCTGCAGATCTCAAGCAAAAATTGGGGGAGCTTCTTCTGAAGTACAGCAGTGGTCTGTGGGCTCATGCCCTCCCTAAACTCTACCAAGACACCTACAAGACCAAGCTGCCTGAGTATGTACTTGACAACCTGCCCCTGCTGTCAGATATATGCACCATTGACTACCCCATGCCGGACAACCCCAAAAGGGCCATTCTGTATGTGAAGGCAGTGGAGGATGAGAACTGCAACCAGGAGGACTTGGCTGACCTGCGGGCGAGAGAGGAGGCAGGGAGACGTATCAGTTACCAGACTGTGCCACCTCTGCTTATTCCCAGGGAGGAGTATCCTTCAGTGCTGGTGGTGGAAGCAAGCAACACGAATAGTGTTGTTCTCAGATACATAGGCGAGGGATACTCCAAGGCCCAGGAGAAGCTTGAGGATGAAATGAAAGAATTCTATGGACAGGACAACACCAAGAAGTCCCTGGTCTCACCTTCATCAGGCCAGCTAACTGCAGTCCAtgctgaggaagaggaagagattCTCCGAGCACAAGTGTGTGAGGTCATGTCTGAGAAAGTCAAGGTTTATTATGTGGATCATGGCTTCTCAGAAGTCATTAGTAAAAGCAAACTGCTGGAGTTGCATGAGAAGTTTTTCAGACTGCCTTTCCAAGCCACTAAATGTAAATTGGCTGGCCTTGAGCCCTTTTCTCAGGAGCCAGTTGTGCTGAAGAAGTTTGACTCTATGGCAAGTGGTAAAATCTTATTGGCTGAGATCCTGGAACGAAACGACATCCCACTGATGGTGTTATACGACACGTCGCAGGATGATGATGTTAATATTAATGCTGCCTGCCTGAAAGCCCTACAGGACAAGTCTTTAGAAAGTCCCATGCAGgtCAACAGTGCCTatatgaatgtgaatgtgacCAGTGTGAGTTCAGATGGGACATTCTGCTGCCAGCTGCCCTCTCGAGGTCTGACCAAACTCAATGAGGTTCTGGAGAAAGCAGAGACCTACTTTCACTCCCAGGTTACATCAGAGTCACTAGTTTCTAGACCTTTCTGTGGAAAAAGCTGTCTGGCTCGCTTCAAAGGCAAATGGTCTCGTGTTGAGATAACTAACCTGCATGGCAGCCGGGTGCTGGATATTCTGTTTGTAGACCTGGGGGTCCAGGCATCTGTCGAGGTCATTGAGCTGAGGGAAATCCCTCCTCCATTCCTGCGTGACCTTACAGCAATCCCTCCTCAGGCAGTGAAGTGCTGTTTGGCTGACTTGTCTGTAAGTGTGGGCTCATGGACACCGGATGCAGTACAGTGGTTACGAGACAGAGCTCTACAGTGCAGCGACTGCAGCTTAAAGaTTGCTAAAGTGGAGGAGAGCAAGCGCTTGGCCCATGTCTACCTGTTTACAAGTAAAAACTTCCATGATCTTAGCCGCAGCCTCAACCACCAGCTTGCTGAATCAGATCTGTGGAAGCACCAGAAAGACGTCTTCTTGAGCAGTCAGGGGCCTCTGAAGACCCCCAGTTCTCCTAAAACCCCACCCACAACACCACCCAACACCAACTCCACTGGTAACTCCAGTCCCAGCACCAATGGCAGAAGCAAAGCTCCACAGACCTCAAAAAAGGTTCCACCTCAGTCTCGCACTACATCTCCAATCACCCCACCCAGGAATCTTGCTCTTCCACCAGTTCTGGAGCTTCCACCCGCTGGACACAATATAGACATTTATGTGTCTGTAGCATGCCACCCAGGCCATTTCGTGCTACAGCCATGGCAGGATATGTACAAGCTGGTGGTCTTGATGGGAGAGATGATTTTGTACTATAACAAAACGGAAGAGAAACCACTCACAGTGGAGAAGAACCAAGTTTATGCAGCCAAAGTGGAGAACAATTGGCATCGAGTGCTCGTGAAGGGAGTCCTAACAAATGGCCTGGTGTCTGTTTATGAGCTGGACTATGGCAAGCATGAGCTGGTCAGCTGCACTCTGCTGAGGCCTCTCATCCAGGAGTTTCGCCAACTCCCCTTCCAAGGCATCACTGCTCAGCTAGCAGGTGTAAAGCCCAGGCAGTGGTCTGAAGAGGCCTCCATTGTGTTCCGGAACCATGTGGAGAAGAAGCCCCTGGTAGCCCAGCTGGACTCAGTGCAGGACGCAGCGCAGCCCTGGGACCGCAAGGTGACTGTCTTCCTGGTGGACACGTCTCAGGAGGACAGAGACGTCTGGGTTCACGACATCATGGCGGAATTTGCAGATGAGCTCACCAAAGCAGCATAATGACCCTGGCTATCTGTCGGTGTGTTTTCATATAAGGTTTCTGTGAGTGTGCACTCATGGGCTGTTCTATCTGGACATGCTGCTTTTAGGTCCTATTTCTTTCTGGCATTAACATTCGGTCGTCATCCAGTCAAGACACAGCATGTTTACATTTAAAGGAAGTGTATGCTTCAGTGGATGCTTCATCATTCAGGTATTAATCAGGGGTGTGTTTCCCAGAAATGTTTAACCTTAGAGATTTATGTACAACGTTAAGAACACAGTTTTTAGTGTTTCCCAAAAACGTTCTTTAGTCCTTAAAAGTATGAATTTTACAATTCTACGATTAAAAGGAGTTCTTTGTTGACTTTGTGTCTGCATCTGTGATGAAAAGCCAGCATCAATCAAAATGTGACCACAGATATacgtatatttttaaattagtatttaactaataataaattacatgcAAATATAATAATTCTTTTTTCTACCTATCATGTATCAATCCTATTAAAATGCACTCATTCATGCATCTACCTTGGCTTTCATACTTATATGACTTTGTAATACTAGGAACAAACAAACTATTTTGGCCCAATTTAGGCTAATTCAGATTTGATTATGTTGAGCATTGGTTGTATTGTATGTGAtaagtttacattttaaaaatgaataccTGATTTTAATGAAAACGAATGtagtcatacatacatataaaggTCATATTGCCATGCATATATCGAGTATATCAGTATATTAACTTTATGTTAAGTACTTAGTGAGTTACAGAATTATGAATGAGTTAAATTACTACATACTTCATTTCGTAGGGTTTCTGGAAACTCCGATTTTAAGAATGTTTAAGTATGAGGTTATGAACATTttgggaaacgcaccccagATCTCATTCGCCTGTTTGCTTTATCATCAACAGCAGCACAGAAAATGCGTCATCCAGGTGTCTGAAGTTACACAGAAAAAAGCTGGTGAAATATGGACCTTGGCTTAGCAGCCACAAATGAAGCTCAGCTGAAAAATAATAagggtttaaaatgttttgcttttgtgtttttaaaaagaggCCTAAAACGATCTAATGTAATAAGAGAGGTGGGAGCACATATGGAATGTAGCTAAACTAGCTGCATCCCATCACACGTGCTCCACTAGATCAGGACAGCTAGATCCAAACCCGCTGTGATTAGCAGGGTGTGTTGTTAATGTAAATTACTGTAAGTGGGGAACAACAGATACAGGACACATTTTAACCCTTTGAGGCACAGTGGTCAGTGTAAGAAACCTTGTTATTTCTCACTtaggaaaagaaaggaaatcTCTACATTTccttaaacttttgactggtttaTTAGAACAGAAAATGTAGCACACAAGAAGTAATGTAAGAACTGTAGATTTTCTGCATGGCTTACCCAAGCTTTCCAACCGGCTTCTTGtagaaaccacttcagaaagTACATTTTACCCTTCACCTAAAAATCCCAACACAAATCTGttttagtttaatagttttattatactttaattggtTTATATCAGTAAATCTGTGTGCCTGAGGGGGTTAAAGTCAAGTGTAAACAGGGCTAGTTTCTAGTTTCTGGATATGGTAAGTGGATGTATGGGAAGGTTAGAGAATTATAGATGGTTAGATCTATTTTATTCTTCTGTAAGGAATAACTTTACTTACATTAGCCGTACAGCTGTGAGGGTCTGAGCATCATGCCAACAAAGAACACACATGCTCCAAGCCTGAGCATTATGCCAGACATACCGTATGTTGTATTTAAGGTACAAtttgaacaatgttcatttgcATTTTCACTTTCTATATCTAATTTTTGAAAGATTTGTGAAGGTTTCTGGTTCAGCATTTGACCTGGTTAACAATGATGTCTAATCCAAAGTCCAGAGATTTACATGATGAAGTCTGAGAAATTGATAAATTGTTTACAAAGCTAGTGAAACATTCCCTTTCATCCATTAATGTGACAAAGCTCCTCatgtttaaattaaggctttacAGGTTTTGACActatttatttagcattttcttgtattattattattatttagagtaAGCAGATTGCATGACATTTTTGGGGTTTTGCAAATAATGTGACAGTAGTAGCATACTTGACAACCTCCAGCTACTTCCTTAGCATTGGCGTGGTTAAACAGCTGAGTTTTATTTAGCTAAATATTATGTGTAGACTAAACATTTTGTTGACAAGTATGACTCAACCTGGGGTTAACTGCATATGCAAAATGATTGAGAAATAAagtttaagaaaaaagaaa

Function

NR:

description
PREDICTED: tudor domain-containing protein 7B-like isoform X1

GO: NA

KEGG:

id description
K18405 TDRD1_4_6_7; tudor domain-containing protein 1/4/6/7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007248006.3 True 5742 mRNA 0.45 18 31684228 31707955

Neighbor

gene id symbol gene type direction distance location
LOC103032972 LOC103032972 coding upstream 14099 31666799 ~ 31670129 (+)
acox3 acox3 coding upstream 64696 31597346 ~ 31619532 (+)
man2b2 man2b2 coding upstream 99255 31572241 ~ 31584973 (+)
ccnb1ip1 ccnb1ip1 coding upstream 117490 31563778 ~ 31566738 (+)
oxa1l NA coding upstream 156321 31522021 ~ 31527907 (+)
rbpj rbpj,rbpjb,LOC107597867,LOC107707427,LOC107549731 coding downstream 65549 31773504 ~ 31859657 (+)
stim2 stim2,LOC107707336,LOC107661953,LOC107684943,LOC107757910 coding downstream 226768 31934723 ~ 32002483 (+)
dthd1 NA coding downstream 2304527 34012482 ~ 34025373 (+)
LOC103033595 per1b,per1,LOC108428562,LOC107711564,LOC107684947,LOC107557521,LOC107677837 coding downstream 2320495 34028450 ~ 34061967 (+)
LOC103032728 lrch4,LOC108428567,LOC107661958 coding downstream 2407186 34115141 ~ 34170245 (+)
G145875 NA non-coding upstream 34343 31648526 ~ 31649885 (+)
LOC111194381 NA non-coding upstream 51303 31627040 ~ 31632925 (+)
G145868 NA non-coding upstream 57266 31624722 ~ 31626962 (+)
G145859 ttc5,LOC107738047 non-coding upstream 116346 31566937 ~ 31567882 (+)
G145854 NA non-coding upstream 132119 31550533 ~ 31552109 (+)
G145966 NA non-coding downstream 28841 31736796 ~ 31739792 (+)
G145968 NA non-coding downstream 30827 31738782 ~ 31739107 (+)
G145969 NA non-coding downstream 49142 31757097 ~ 31757667 (+)
G145974 NA non-coding downstream 80990 31788945 ~ 31848894 (+)
G146034 NA non-coding downstream 299771 32007726 ~ 32012637 (+)
G145748 mus81 other upstream 329784 31352296 ~ 31354444 (+)
G145711 chd3 other upstream 461894 31197218 ~ 31222334 (+)
LOC103044823 NA other upstream 554205 31063439 ~ 31130023 (+)
LOC103022860 LOC103022860 other upstream 769391 30911831 ~ 30914837 (+)
G145543 NA other upstream 1012041 30668799 ~ 30672187 (+)
smim20 NA other downstream 9187 31717142 ~ 31719051 (+)
tbc1d19 tbc1d19,LOC107660707 other downstream 184571 31892526 ~ 31926550 (+)
trnae-uuc_22 NA other downstream 363359 32071314 ~ 32071563 (+)
G146104 NA other downstream 904170 32612125 ~ 32612562 (+)
pcdh7 pcdh7,LOC107568147,LOC107684944,LOC107561555,LOC107681559,LOC107753999 other downstream 1171735 32879690 ~ 33104229 (+)

Expression


Co-expression Network