LOC103037073


Basic Information

Item Value
gene id LOC103037073
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 39082567 ~ 39085178 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007250169.3
TTGGACTTTGCACAGATGATAAAGCTTTATATCAGTGCAACATTTTCTAACGTAGCAACCTTTAATCTGAGCCAGCATACAGTAACACTATCAGATGTGCTGGGAATGGCACTGACTGGGAATGGAGTTTTTTTCCTGATGCTTACAAGCTTACTATGGTCATTTCCACTTCCTGGTGACTGTCTAAACAGTAGTAAAATCTTGGTAGTTCCTGTTGACGGCAGTCATTGGGTTAATATGGAGATCATCCTGAAAGAACTGCATTCCCGTGGCCACAACCTCACTGTGATGAACTCGGCCAAAAGTTGGTACATCCCAGATAAATCTCCGATCTACACCACCATCCCTATGAAGTCACTTCAGGATTACATAGACCAAAACTACTATGAAAAAatgctgaggagaaatctaGACTTCCGTAGAAATTGGCCTTTGTTCACCTCCATCTTACAACAATGGGATCTCACTCACCTGTTAGGAAATGGCAATGTTCATCTCGCCAATGCAGCTATGTCAATGTTTGAAGACAAGGCCTACATGGCACAACTCAAAGAAACCAAGTATGACATGATGTTAACTGACCCAGCTTTTCCTATTGGATTGCTTATAGGCCACTACCTTAACATACCTATGGTATTTAACGTCCGTTGGATCAACAATGGGGATAGCCATTTTGCCTTTGCCCCTTCCCCGGTTTCTTACATTCCACTAAGTGGATCTCACCTCCCAGACCAAATGACGTTTTCAGAGCGGATTAAAAACATGCTTTTCTATTTCACCTCTCTCATTCAGCAACACTTCTTCATCGATCCTCCTTACAGGAAATTACTTGACCTCTACTTCCCACCAGGCTCCACCATGCTGGGCCTGCAGCAAGCTGCAGATTTGTGGTTGGTGCGTTCAGACTTTGTCTTTGAGTTCCCACGTCCCACAATGCCCAATGTGGCCTATATTGGAGGTTTTCAATGCAAACCAGCAAAGCACTTGCCCCCAGATATGGAAGACTTTATGCAGAGCTCAGGAGAACATGGAGTGGTGATTATGTCATTGGGGACTATCATCGCAGCCCTCCCGAAAGAGATCACAGAGGTTATTGCTGCAGCCTTTGCTGAGCTTCCTCAGAAGGTCATTTGGAAATACCTCGGTGATGCACCCTCAACTCTTGGAAACAACACTTTGTTAGTAAAATGGTTTCCTCAGAATGACCTCCTAGGCCACCCCAAGACCCGTGCCTTTGTGTCCCACAGTGGAACCAATGGCCTGTATGAAGCAATCTACCATGGTGTCCCTGTTTTGGGTTTGCCTCTTCTTTTCGACCAGTTTGACAATGCCCTAAAGCTGAAGGCTCGAGGGGCAGCTCGAGTTCTAGAGGTGGCGACACTCACTAAGGACGAACTCCTTGAAGCCTTGAAAGATCTATTGGAAAACCCAACATACAAAAAGAACATACAGAGGCTTTCAAAGCTGCACCATGACCAACCTGTGACTGCATTGGACAGCGCCACCTTCTGGATTGAGTATGTCCTTAGACACAAAGGTGCTCCACACCTGCGCACTAAGGCCTACACCATGCCGTGGTACTCTTACTACAGTGTAGATGTGGCAGTGTTGCTTTTGAGTATTGTTGTAGCTTTTATCTTGATCTCAGTGTGTGTCTTCAAGATGCTCTATCACAAGATTTTTCACAGGAAGAGAAAACAGGAGTAAAGCTGCCTTAGAAATCTTTTTAACACAATCAGAGCTCAAAAGAAGATGGCTGAAACATCTGTGATATGCTATGGACAAAGTACCACAGCACTCCTCTGAACCGGTCTAAATAACctttctttaaaatgatgaagAGTCACTGCCCCATTGCCTCAGTCCTGTATACCTATAGCTGCAACATGGaatttaaagcaaattaaactcTCACAAAcatgttaa

Function

GO: NA

KEGG:

id description
K00699 UGT; glucuronosyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007250169.3 True 1926 mRNA 0.44 2 39082567 39085178

Neighbor

gene id symbol gene type direction distance location
LOC103037934 LOC108434867,LOC108267153,LOC107572570,LOC107753961,LOC107659726,LOC105903083,LOC107667731 coding downstream 13016 39065680 ~ 39069551 (-)
LOC103040853 LOC108434861 coding downstream 76338 39000095 ~ 39006229 (-)
sf1 sf1,LOC107753954,LOC107659718,LOC107562691,LOC107588130,LOC107691964 coding downstream 84826 38986012 ~ 38997741 (-)
LOC103042589 pygmb,LOC108434859,LOC108267457,LOC107753953,LOC107742296,LOC107562665,LOC107701539 coding downstream 99350 38963738 ~ 38983217 (-)
LOC103041964 clcn5,LOC108434858,LOC108267828,LOC106563682,LOC108279192 coding downstream 121064 38927526 ~ 38961503 (-)
LOC103037604 NA coding upstream 6377 39091555 ~ 39100775 (-)
LOC103036765 ponzr4,LOC103036765,LOC107753991,LOC107572567,LOC107572169,LOC107659716,LOC108434828,LOC108267307 coding upstream 15939 39101117 ~ 39104853 (-)
LOC103036164 LOC108434831 coding upstream 41721 39126899 ~ 39137179 (-)
LOC103035548 cldn7a,LOC103035548,LOC108434869,LOC107667734,LOC107753993,LOC108268068,LOC107572167 coding upstream 68059 39153237 ~ 39161707 (-)
LOC103034907 chrnb1l,LOC108434832,LOC108268067,LOC107753962 coding upstream 71971 39157149 ~ 39195199 (-)
G147637 NA non-coding downstream 56850 39023013 ~ 39025717 (-)
G147629 NA non-coding downstream 155768 38926385 ~ 38926799 (-)
LOC111194220 NA non-coding downstream 331210 38747818 ~ 38751357 (-)
G147514 NA non-coding downstream 400889 38639308 ~ 38681678 (-)
G147506 NA non-coding downstream 453457 38628400 ~ 38629110 (-)
G147643 NA non-coding upstream 53843 39139021 ~ 39141977 (-)
G147645 NA non-coding upstream 63914 39149092 ~ 39151181 (-)
G147691 NA non-coding upstream 174719 39259897 ~ 39260652 (-)
G147693 NA non-coding upstream 177647 39262825 ~ 39265172 (-)
G147698 NA non-coding upstream 237413 39322591 ~ 39323343 (-)
LOC103038564 fxr2,LOC108434865,LOC108267464,LOC107750766,LOC107753958 other downstream 21508 39041593 ~ 39061059 (-)
LOC103039602 rbm4.3,LOC106577685,LOC101471146 other downstream 64935 39014002 ~ 39017632 (-)
LOC103040134 NA other downstream 70150 39006986 ~ 39012417 (-)
LOC103047699 NA other downstream 1171694 37904892 ~ 37910873 (-)
LOC111194363 LOC108267931 other downstream 1223996 37840882 ~ 37858571 (-)
G147652 ponzr4,LOC103036765,LOC107753991,LOC107572567,LOC107572169,LOC107659716,LOC108434828,LOC108267307 other upstream 14920 39100098 ~ 39104914 (-)
LOC103036951 ponzr4,LOC108434830,LOC107659705,LOC107750795,LOC107667736,LOC107753979 other upstream 25970 39111148 ~ 39113616 (-)
LOC103036465 NA other upstream 32089 39117267 ~ 39123815 (-)
fgf11 fgf11,fgf11a,LOC107664286,LOC107753963,LOC107750771,LOC107659728 other upstream 180171 39265349 ~ 39398012 (-)
tmem256 tmem256,LOC107564775,LOC107659713,LOC107560291 other upstream 405383 39490561 ~ 39498234 (-)

Expression


Co-expression Network