LOC103037934 (LOC108434867,LOC108267153,LOC107572570,LOC107753961,LOC107659726,LOC105903083,LOC107667731)


Basic Information

Item Value
gene id LOC103037934
gene name LOC108434867,LOC108267153,LOC107572570,LOC107753961,LOC107659726,LOC105903083,LOC107667731
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 39065680 ~ 39069551 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007250172.2
ATCAAAAAATCAGACAAGCCCCTCAGGCAGACAGGGACGTACCGTACagcctcactcactcactcactcacactgttCCCCGCACTTCGAACCGAAGGCCAATATAGGGAACTTTTGGATGAATGCAAAAGCTAGCACAGCAGCAGGAGGCCTGTGACTGCAGCAGCTGGGTCTGGACTACAGTGCAGTGGAAAAAACGCTCTAGGTTCAGAGCTTCAAATGTCTTTCATATGTCAAAGGCAAATACATCATGTTTCTGAACCTGACGAATGGGAGCTGCCATCTTCCCCTGGAGACAGATCGAGTTGGTCTAACCTACATCTACAGCCTGGCCTTTTCTCTGGGTCTCCCAGCCAATCTGCTGTCTCTTTGGGGATTGTACCAACTGGGTCGCTCTGGTGGGGGTGGATGCCAGCTGGTTTACATTCTGAACCTGCTTCTGTCAGATCTTCTCCAACTGCTGACCTTGCCTTTGTGGATCCTCTACCTACAGGGGGAACACCACTGGCCCTACGGCTCCAACGCCTGCCAGCTGGTGGGATACGTCTTCTATGTGAACATCTACTCGAGTGTCATCTTCCTGTGTCTCATTGCCCTGGACCGGTGTCTGGCCATTGTGCACCCACTCAGCAGCCGCTGTGTGAGGAAAGTACGTCTGGCTGCGTTTTCTGGAGTGGTAGTGTGGACTGTCATATTCCTCTTCTGTCTAATCGGCCTCTACCCATCTGTGTTTGAGCCTCAGAGGGGTTTGTGTCTGGAGCAGTATCCCGTCAGCCACAGATATGCCTACTTTAAGATAGCCACAGTGGCCCTAGGCTTTCTGATGCCCTGCACTATACTGGGCTACACCTCTGCCAAAATTGGGGTTACACTCCGCAACTCTCCTTCAGTCTCAGACCACGAGTGCCTCAGAATCGTGGGCACCCTCACAGTCATCACCATCAACTTCATCGTCATCTTTGGCCCCTATCACATGGTAGGCGGCTATAGATTCATAGCGCTTCTTCTCACCGAAGACCAGTGCACTCTGGAGCGCTCCATCTACCTGTGCTACAGGATCTGCTACGGGCTAACCAGCCTAAACACCCTGCTGAACCCTCTCTTCTACATCTTCCTCTGCCACAATGCCCGCCTCGAACTCCAGAGGTCTCTACCCTGCCTGAGCAGAAGTTCTAGCACCCACCCAGGGCTGAGGATCATGACCTTTGACCCTAAAGATCAGCTCAACCGCAGCGCAGATGTGTAGTCATCACGTGCAGATGTCAATCAGCAATGGTTTCTCTTGTGGAATGTGTGCCGGAAACCAGCAGGGTTTCATGAGATGACGCTTAAATGGCTTATCGTGTATCTGTGACGAATTACCTGTCAGGGCCCAGATCACATCCGACTGTTCATTGGGGCTGCTGGTATGacacacacagtgacacacACGGGCTACGTGAGCTCTGTCGCCCAGCGGTTTCTAAGTGCCGACAGCATCTTCAGCCAAGCATTACAGTTAGCATACAGGCGGTCTGGACAGAGTGTACTACAGCTGATTACAAACACTCATCAAATACTTCACATTTTAGCAAAGCTCAATTGTATAAATGTACTGCACTCTGTGTCTTCAAGGGGAATTCCTCCAATTCAATTGGCAAGATAAACAAAATCGTTCACAGTGAAGTTGATGTGAAAtggagcatggtagagaagctCACAAACTAAGATTTCTTTTACACTGTAGGTAATAGAAGCCAGAAGTCACAAAGTCTTACTAGGGGTGACAATTAATACTATTGTTTTAGGTCTGAAACTGATACCAATACTGCAGCTTTGAGTATCAATCAGATACCATTTCCATTGCTTTCCCTCTCTTAAACAAAGCTGATCATAATGAATTTGTCTAAATGCATTTTGTTTAGCACAGACATCTACATAACATCATGCtcaaacaaataataatgtatttcaggcagtatgtattatataatactaactgtgtatattgagtatattGAGTTTTCATATGCATTTGTGGAAATGGTCAAGTAGCTGTAAGTGGATTTGAAGTCAAAAATCTAACGGCAGttattctacaaaaaaaaaaacattctacttCAGAGCTGTTAGAGGCATTGAACGCTCTGAATGTCAGCTTTGCATCCCAAATTTGCAGAAAAAATGTGTACCAACCTAGGTTTCTCTAAAATGGAGCATTTCAAATCAAACCTTGATTTGAATGACTttgtttacattatatttagcagaaatatagtgtatgtagAAAAATGCTGGAATTCTTTTAAAAGCTTGCTTTATTGCTAGGAACAAAATGTTCTACGTCTTTAGGAATTTACAGAGGGCGGAAGACAAATTATTTTCCATTAATGATAAAAAGCTGTGTGactatttttatattgagtTACTTTAAATTGAGTTACTGAGTTACTTTTACAAATGAAATTCTAGTATCATTtgtagttttaaatatttattaattttgcaTGTTATTTATATCAGTCATCGCAATGCCCTGCCAAGACTTCAGGTCCAGTTTTGCTGTTTGCACTTAATTAGTAGTTTTAGCAATTTTGTAATACAGAAATATGCATCTTAGATCGATCAGTATGAAAACATATTGCagattatttttccttttacttACAAGGAGTAAACTGAAGAAAGCTCTTTACTTGAGTAAATTTTCCCTGTAGTAAAATATCTGTCCAGTACTATTTCCACCACTGGCCTCAGGTTATCATCTGTAACTAGTATTGTCTTTAAAATGCTTTGAGGTTTGAGGGTTTTTAGATAGATACGCCTGAAATTATAGCTCAGTCAAAACTTTTTGTCAATGTCTTCCATACCTATTAAACTGCACTTAACCGATTATGGTCTTAAAACGTACTCTAGTAAATGTGTCACCAGACCACCTAGAGGACAACTTATGTTACATATGGACATAAAGCCATAGTATAAAGAGGTATTTTCATTATCATTACTGGTTCTTGGGGGCTAATgggaatattatttatttacactttaatGAAATGCTATTAAAAACCAATAAAGGAAGTTAACATTTAGTTTGTGAAGCTGCTTCAGCACTTTCTAATGTTCTTATACTCTCCAATCCGGAGCTGAGAGAAACTGACGAGTATCAGTTTGGTATAATTGAGTGAGTGTATTGGCTTGTGATTACAGGTAAAAGGGTCTGAGAGAAAGGAATATaaatcaattttattatttaaaaaactaatgaaataaactaaaatgaaaaGCAAA

Function

NR:

description
PREDICTED: probable G-protein coupled receptor 132

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007250172.2 True 3267 mRNA 0.42 4 39065680 39069551

Neighbor

gene id symbol gene type direction distance location
LOC103040853 LOC108434861 coding downstream 59451 39000095 ~ 39006229 (-)
sf1 sf1,LOC107753954,LOC107659718,LOC107562691,LOC107588130,LOC107691964 coding downstream 67939 38986012 ~ 38997741 (-)
LOC103042589 pygmb,LOC108434859,LOC108267457,LOC107753953,LOC107742296,LOC107562665,LOC107701539 coding downstream 82463 38963738 ~ 38983217 (-)
LOC103041964 clcn5,LOC108434858,LOC108267828,LOC106563682,LOC108279192 coding downstream 104177 38927526 ~ 38961503 (-)
LOC103043213 LOC108410408,LOC108267136 coding downstream 219682 38828677 ~ 38845998 (-)
LOC103037073 NA coding upstream 13016 39082567 ~ 39085178 (-)
LOC103037604 NA coding upstream 22004 39091555 ~ 39100775 (-)
LOC103036765 ponzr4,LOC103036765,LOC107753991,LOC107572567,LOC107572169,LOC107659716,LOC108434828,LOC108267307 coding upstream 31566 39101117 ~ 39104853 (-)
LOC103036164 LOC108434831 coding upstream 57348 39126899 ~ 39137179 (-)
LOC103035548 cldn7a,LOC103035548,LOC108434869,LOC107667734,LOC107753993,LOC108268068,LOC107572167 coding upstream 83686 39153237 ~ 39161707 (-)
G147637 NA non-coding downstream 39963 39023013 ~ 39025717 (-)
G147629 NA non-coding downstream 138881 38926385 ~ 38926799 (-)
LOC111194220 NA non-coding downstream 314323 38747818 ~ 38751357 (-)
G147514 NA non-coding downstream 384002 38639308 ~ 38681678 (-)
G147506 NA non-coding downstream 436570 38628400 ~ 38629110 (-)
G147649 NA non-coding upstream 8749 39078300 ~ 39102214 (-)
G147643 NA non-coding upstream 69470 39139021 ~ 39141977 (-)
G147645 NA non-coding upstream 79541 39149092 ~ 39151181 (-)
G147691 NA non-coding upstream 190346 39259897 ~ 39260652 (-)
G147693 NA non-coding upstream 193274 39262825 ~ 39265172 (-)
LOC103038564 fxr2,LOC108434865,LOC108267464,LOC107750766,LOC107753958 other downstream 4621 39041593 ~ 39061059 (-)
LOC103039602 rbm4.3,LOC106577685,LOC101471146 other downstream 48048 39014002 ~ 39017632 (-)
LOC103040134 NA other downstream 53263 39006986 ~ 39012417 (-)
LOC103047699 NA other downstream 1154807 37904892 ~ 37910873 (-)
LOC111194363 LOC108267931 other downstream 1207109 37840882 ~ 37858571 (-)
G147652 ponzr4,LOC103036765,LOC107753991,LOC107572567,LOC107572169,LOC107659716,LOC108434828,LOC108267307 other upstream 30547 39100098 ~ 39104914 (-)
LOC103036951 ponzr4,LOC108434830,LOC107659705,LOC107750795,LOC107667736,LOC107753979 other upstream 41597 39111148 ~ 39113616 (-)
LOC103036465 NA other upstream 47716 39117267 ~ 39123815 (-)
fgf11 fgf11,fgf11a,LOC107664286,LOC107753963,LOC107750771,LOC107659728 other upstream 195798 39265349 ~ 39398012 (-)
tmem256 tmem256,LOC107564775,LOC107659713,LOC107560291 other upstream 421010 39490561 ~ 39498234 (-)

Expression


Co-expression Network