LOC103023814 (LOC108440030)


Basic Information

Item Value
gene id LOC103023814
gene name LOC108440030
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 37770817 ~ 37787820 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007250215.3
GTAAGAAAATTAAACTcctaaacgttacactgaccgaTGCTACTACTGTAAATGCTCTTTGTTCTGAGAGCTGCCCACTAGAAGACGCTGTTTCTGTCTCAGTGGGGAAAGGAGGAGGGGGTATTAGGTTTGGTGAGTGTAATTCAAACCCAAATCCCCGTCCAGGCCCGGGGAGGGCGAAGCTGGAGGAGCTCGACAAACAGCAGCAGCGGGTCCAGACTGTCCGTCTGCAGGAATATCTGAATTAATGGCTCTGCTCGCGGCTTGTTTCAGCGCGGTGTGATCAGCGATGAGACGGTTTAAAGTGGAAGAAAACATCATGGAGGACCATGTAATTCCCCAAGAGATAAGGAGACCGACCCCAGCAAGCAGCCCACTCATTTGGATGTAAGGAAAAGAAGATCTTTGAGGACTGGCCAGATTACATCACTGGGAGATCCAGCTCAGCGCCTGGTTCTGGCAAACATGTGCATGGGCCATACTGCCCAGAAGTGACCAGGACAAAGGTTCAACCTGGACTTAGCACTGACTGACCCATCCTGAGGATTAACGTGGACCACTGGCAGTAgccatgtctctctctacGGTGCTAGCAAAAGCATTGTTTGACAATGCAGCAGAGAGTCCAGAGGAGCTGGCCTTCCGCAAGGGTGACATTCTGATGGTTCTGGAGCAGGAACAGGATGGGGGTCCCGGCTGGTGGCTTTGCTCTCTCCATGGACGCCAGGGTATTGCCCCGGCTAACCGGTTGCGCCTCCTCCAAACCGCTCCAGCTCCAGGTCCTGTCCCGCCAGGCACAGACAACCGTCGGGCTCCCAGTGTGGACTCAGTTTATCTCTCACCCGGCCAGCAGACCCGCGTCAATGGCCTGTGCTCAGAGGATGCAGATGGAGTCTATCTCTCACCCCCAAGCCTGGGGGAAGGGGTATATCAGAGTCCAGGAGGTGCCCCAGGACCAGGCAGACAGGAAGAGCTTCGTCAGGCTGAGGGCAGGAGGCCCCGCTCACACTCTAGCTCCAGCCCGAGGCCACGGCCAGACTGGAGCGAGATGGGGGTGGAGAGCCGTCCACGCTCGCCCTCTCTCAGAGGACGCATTGGAGAGACTGGTTCACTTTACCAAACCCCTGCTTCACCTGCACCGCTAGCAGCACAATATAGATCTCAGGGTGCCTTGGTGTCAGATTCATTGTACCTGACTCCCAGCGGTGTGGCTAGACCTGTGGGGGAAGCAGCTGGGGAAGTCGCCTATTTAACACCAAGGGACTCAGGGGCTGCAGGACATTCGGATGGCTGCTATCTGGTCCCTCGGCCAGCCGTGGCAGCTTTGCCCAATGAGGATTTGTATCAAACCCCAACAAGCGGTGCTCCAGTAGCAGGACAGTCTGTTTCAGTGCCTGTTGCTAGGCTCCAAGATGGAGCAACCAGCCAACCCAAAGCAGGTCAGGAAGCCCCTGGGATGTACCAAACCCCAACCCCGCCAGGGGCAGCCATGTCAAGGACTCCTCAAGCAGAGCGCAGACTACCTTCTGGGTCTACAGTGGTATCGCCCGCCTCAGGACAAAATGTAAAGCAGACACCCCCAACTCCCAGACCTCAGGGTCCGTCTGCCACACCGCCTGTGGGTCGTGGGAAGCTGTCCCAGGCTGCCATGAGGGGGTCCCCACATCTCGTCCGTGCAGGAAAAGCTGGGGTGCCAGGTTCTCCAAACTTCGGCCGGAAGCCCCCGCCACCAGCACCACCAGTTAGAAGTGTAACTAGGAAGGATTTACCTCAGTGTGCAGCTGTGCCCGCCACCAATCCTGCTCTCCAGGCAAGCCCTGCACTTCTGCACCCCAATAAAGAGGAAGAACAAGGACAGATGAGTAGAGATGGAGGGAAACTtgaggaagagaagaaaaaggcTACATGTATGATAAAGAAAGGAGATGACAAACAGTGTGCTGATGAAACACTTGGTGATCAGGTTTATGACACCCCACCCACCAACAGATGGCAGCACCCGGTTTCTGCAGTATCTGTTGAGGAGGATGACAGCATCTATAACACCCCCCGCACTGTCCCCCTACACACTGAATCAGGATCAGAAATTTACGACGTTCCCACCCTCGCTCTGAATCCAGCCTGCAGTGTCCCAGCATCCTCTGTGGTGTGCAATGAAGTGGAAGATGATGTTTACAGCGTTCCAAGTCTTCCAGGTTTGCCCTTGGAGTCTATTGAGATACCTGTATCAGTGGTGGTGGAAGCAGGAGGAAAGTCTGAAGTTTACTCCATCCCCAGTCCAGGAAAAATAGAATTAGTATCTGAGGACATCTTAGAAACTGATGGTGGCATCTATGACATGCCTGCTCTCATGCTGGACATCCCTATGCGGCGCCTGTCTGTGTCTAGTACCGGCTCAGGCGACATCCAGTGGAAAAACTCTATTTCCACTCTCGTCCAATCAGCATTGAGCTCTGCCTCAGTCACTACCACACCTTCCAGGGACCTGGCCACCTCACTGGCTGAGATTTTATCCACATGGAAAGCAGGCCAAGTTGGTGATGTTCCAGCTACGCTTCAGCAGATCTGGTCTAGGCTCGCAGACCTTCTCCCTGCCCTCTCAGTTTGTGGCTCCGCCCCTCCAGCAGAAAGTCTGCTCTTGATGGTGCGCCGCGCACTTGAGGACTCCTCCTCTTTCCTGCAGACTCAGACTAGGCCCCGCCTCCCTTCCCAGGAGTCGCTTTCGCGGAGGCCACTTCCTGCCTTGCCGGTGGCCGAGGTTAAACCCATGGCAGGTGGAATGGGCTCACGTAAGGGCAGCTGGATCCAGGAACGCCCGCTGCCTCCTCCACCACCCGCGGCTTTCCCGTTGCCCCCGGCGCCTGCCTCCTCTCTGCCGCCCGCTGTACGGACAAACGAGGATGAGGAGCAAGGGAACGAGTATGCAGGAATTGGGCTAACCCCTGCACCTCCACCTTCATATCCTGCAGGAGATAGCGTGGGATACGTCAAACTGCAGGGAAAGCCTGAACCACCTCCTGAATCACAGATGGAAAACGGCACATCGCAGGTCATCTCCACAAATGATACCAGATTGAGCCCCTCACCTCCTCTCCAAGGTTCTATGTCTCTGGAGGATTCAGAGCTTCTCTCCTTCTATTCATCCCAAAGTATGTCTCACCTCTCCTGCCTGGGTGATGCAATAGATGCCCTGTTCAGCAGCGTTCAGGAGAACCAGCCACCACGGATCTTCGTGTCTAAAGGGAAGAGTCTGATTGTGACTGCACACAAGCTGGTGTTTATTGGTGATACGCTTGCCCGTCTCCTCAGCTCGACAGACCTCAGGGCAAAGgTCACTACATCCAGCGGACGTCTTTGTCAGGCCCTGAAGGCTGTCGTTGTTGCAACCAAAGGCGCCGCTCAGAACTACCCCTCAGTCCCAGCCACGCAGGAGATGGTGGACCGTGTGGCTGACCTCTCCCAGCAAGCCGCCGGCTTCTCTGGGCTCCTTCAGCGGCTAGCAGAGATATCTTGATGTcttttttgttgtctttttttctgttgtttttgttacagAGATTCATGAAAGAATGCCTTATTTGTGggtgtttgtatttttattacagttgcTTTATTGATTGTATTCAAAGAGGTATTCTGATTGTATCACTGATTGATTATACCGGTACCACAGTGATCTGATGTGATGTGTGCTTAAAGACGGTGAggttgtgtatgtatgtgtatgcgTACATGTGAgcgtttgtgtgtatgtatgtgtatgggTGCCAGTTTGTAAGTGTTTGGTTCGTTGTTTGTCGTTTTCAGGGTGCCTAGCACACTTCTGTGCGTCCTAATAACTTATTGATGGAGGTTTGGGTTGGTGTGAGGAACGTGTTCtgcacattacaaaaaaaattgtatcttGGCAAGAGAAATTATCATAAATCTAGCTGATATATGTAATATTTCTCGTTTTaagtgtactgtatgtgtgctgAGTATTTAACATATTCTAGAGGTTTGGATGTAATCGTTTTAATACTTTTCACTTTAGAAAACAAGACTATCCAGAATTGACAATTGATTATTGTTGTCTGAAAAAGTTTATATATTGAGAAATTTTAACAGGGCTCATTTTTCCATTATTGCTgtcctgcaaaaaaaacatttctccacTTTTACTTTTTGACCTTATTGGatcaaatctttttacattgactttcattgaaagtgaagaataaagtttttttcttctcctgtaaagttgctatatATCACTTTTCAATTTGTGTCGCTAGTGCTGGAGATAttgttgaatgttttttttggtaattgCATTTGTTACAATCAATTTTCCATTGTAACAgaaacagtgtttattattaacacTTGTTAGTGTTAATATTAAAGTACTGTAACAAAGTTAGAAATTCCAGTATAATGGCAACACAACTACATTCTCAAAACTGTAAATGTTATACAAACATTTAGTAAAAACTCCTTATCTGGGCAATGAGATCTACAAAGCTTTCCTTATTGAagtttggttttatttatttgtagttattatcaaacatgtttaattatattaaataaggtGAGctaaaaaatcacaaaattcaCAAGATTGTCTACAAAAAGAGAAACATCActtatttttaacagtattCGTGTTTCTCTGCATCTGTTCTAATGTGAACTGTAGTTTCTGCTAAGAAAGTGGTTATAAATAATGTGCTTATGTGGCTAAAACgtctgcacagtactgtatatatcaaCTAGAAATAAGATGGTTTCACTCAGCCaaggtattattttttacatgtttcGTTGATAGTGTGCTGCACGTGTTTGCtttcttttgtatttgttttttactgcatattgGGTTGAGAAGTGATGGTCATACACACATGGAATGATAATCTGCGTTTATGTCAGGGACAAttcctctcttgctcttttacGTATACAATTCAACAGGCGACTGTTTTAGTTTCTTTGGAGTTTGGAACGACACACAAAACAGCTTGGGGTGCTGCAACGTATGCCTTAAAACTAAATGGCACAAGCGCTCATTCATCCAGAGAGCGCCATCTTATCTGGTTCTGGCTGGAATGCATGTATTGATAGAGAGGCAAAAAGGAATTTGTGcttcattttgaaacaaagaTGGGAGGCCAGGTAATGGAGGGATTTCTGTTGATCCGTTGGATTTTGTTCTTTCCCACGATGGTGACTGAATCAAAAACCTGTTCGGCAGGTctcctgccttttttttttctctctctctttggtctgtttccTTAGCCTTGGTTCCTTGGTTCATATTGTCTTCTCTTGCCTCTGTTTTCCCACATTTTCTCTTTTGGGCTCTGGTTCTGCAGCTGTTTATCTTAGAGACATTAAAAGTTACTGATGGAAGATACTGTTAGATAAaccacaatgcaaaaaaaaaaaagctaagcaAATATAGGCTACTGTAACCTGTAATCTTTGCGCATAGATATACAGCATTCTTGCCTTTAACTGGAACCcagcaatatataaatatataaatatatatatatcaaccaTTTTTTTACTTGTATTAATCTGTATTCAGAGCAGCTTTGAAATTTCATACGCATGTGTATCACTTACATGTGAGCAGGTTTAGGGATTACATATCTTTCTGTGGTGCAGCCACAGGTCCAGGCATGAACCTGTTACCTTTCTATCTCTGTGTTAGTCAGACTTAGAGCAGAGCCCTCATGTTTTTTGTACAGCTCTGTCCCACATCCTTAATATAGAGATGAGACTAAAGCACAATACCAGGAAACCTTAATTCCTCACTTTGTCTtccatttgtcttttttttgacCACCTTATCTTTGTTGTCAGAATTAGCTCTTTTCTTCATTGTGATGAAAGAGCTGACTGTATTGTTCCCCTTGCTTCCCTGTAGTATTATCTGTTATCTGTATGCTCATGCACTGACATGTTGTTTGGTCTGCTTATGCTAACAACATATATCAAGGCTGAACTCTTAATTCCTGAACACACAAAGTGCATGACTACAACTGCAGCCTTGTGCACTGTCTCAGACCGCCATCATGTGGACCATATCAGTATTACTGCACATCCTGGCTTGCAGTGTGAACAGATTCTCCTCCTAGAATACTGTTGTCTCTTATCCTGCCTGGAATTGGTTTCTTATTAATCTCTGGgttattgtatttataattCATCATAATGACCTGTATCATTCTCTCCCGAGTGACCTGCTCTTTCAGAGACTAGTTTTTAAATCtaagaaaaaaactcaaatacaACTGAAACCATTGTAAAGCTTAGATTAGTTGGCCTTAGAGAAAGCATtgtaatcatatttattattttgtttgtttgtttgtttttaatcaaacatatgcATGGCTTTAAGTTGCTCTTTACAAATACATATATGCACATGTGACCAGGGATGCTTTcctgcaacatttttgcaacattAATAATTGCAGTTAAATGTGgagatttgttttctttttgtaccAGAATGTATTTTTGACACTCATtttttgatgtttattttaaatttaaatgggTTTCTTCAAACACCTTTTATGTAATGGGTACTTTTGTGGACACTTCATCTGTAGCTAGGCATCCTCCGGTACTTGTcataaaaccataaaacatttttccaaaatacatttttgtttaaatgca

Function

NR:

description
PREDICTED: embryonal Fyn-associated substrate-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007250215.3 True 6693 mRNA 0.46 8 37770817 37787820

Neighbor

gene id symbol gene type direction distance location
LOC103024124 acin1,LOC108440069,LOC108267949 coding downstream 3857 37742557 ~ 37766960 (-)
lrp10 lrp10 coding downstream 85095 37674854 ~ 37685722 (-)
LOC111194362 NA coding downstream 98787 37661676 ~ 37672030 (-)
LOC103040682 nedd8,LOC103040682,LOC108440049,LOC107562413,LOC107588156,LOC107384241 coding downstream 245710 37522233 ~ 37525107 (-)
LOC103042927 NA coding downstream 281282 37466834 ~ 37489535 (-)
LOC103023489 LOC103023489 coding upstream 1285 37789105 ~ 37795277 (-)
LOC103022872 NA coding upstream 13084 37800904 ~ 37808295 (-)
LOC103022155 LOC103022155 coding upstream 28466 37816286 ~ 37821933 (-)
LOC111194218 NA coding upstream 35388 37823208 ~ 37824650 (-)
LOC107197638 NA coding upstream 41498 37829318 ~ 37834005 (-)
G147311 NA non-coding downstream 162932 37596154 ~ 37607885 (-)
G147320 NA non-coding downstream 167895 37584618 ~ 37602922 (-)
G147321 NA non-coding downstream 169420 37584263 ~ 37601397 (-)
G147312 NA non-coding downstream 173826 37550249 ~ 37596991 (-)
G147359 NA non-coding upstream 23778 37811598 ~ 37812345 (-)
G147386 vbp1,LOC107588140,LOC107668907,LOC107562614,LOC107742288 non-coding upstream 215659 38003479 ~ 38009023 (-)
G147390 NA non-coding upstream 234235 38022055 ~ 38022505 (-)
G147397 NA non-coding upstream 253632 38041452 ~ 38041671 (-)
G147407 NA non-coding upstream 305692 38093512 ~ 38122985 (-)
mrpl52 mrpl52 other downstream 44008 37723384 ~ 37726809 (-)
G147302 slc7a8a,LOC107742270,LOC107668787,LOC107588204,LOC107562402,LOC107691931,LOC107753926,LOC108440039 other downstream 256365 37508661 ~ 37514452 (-)
G147092 NA other downstream 379082 37352078 ~ 37391735 (-)
poln poln,haus3 other downstream 524792 37084996 ~ 37246025 (-)
LOC103043480 LOC108442826,LOC108267520,LOC107738028,LOC107683536 other downstream 1064536 36666199 ~ 36706281 (-)
LOC111194363 LOC108267931 other upstream 53062 37840882 ~ 37858571 (-)
LOC103047699 NA other upstream 117072 37904892 ~ 37910873 (-)
LOC103040134 NA other upstream 1219166 39006986 ~ 39012417 (-)
LOC103039602 rbm4.3,LOC106577685,LOC101471146 other upstream 1226182 39014002 ~ 39017632 (-)
LOC103028345 LOC103028345 other upstream 1242178 39029998 ~ 39250697 (-)

Expression


Co-expression Network