LOC103040234 (keap1a,LOC108428896,LOC107749088,LOC107678690,LOC107721712,LOC108268010,LOC107690048)


Basic Information

Item Value
gene id LOC103040234
gene name keap1a,LOC108428896,LOC107749088,LOC107678690,LOC107721712,LOC108268010,LOC107690048
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 4824630 ~ 4854002 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007250706.3
aatcggattttcgcggaagCCCATGTTTGGAGAGTGTATGGCAGCGACACCACACCCAGCCAGTGTTGTTCTGCTTCAGATCGGGAGGATCCAGCTGAATGAACTAGAACTTTCTCGAAGTAGAGAAGTGAAATCGAGGGTGCTTGGACTCGGGGCGCCCGTTCGTAAGAGCATTTTCTGTACTTATTGAGAGAATGATGTAATTATTATACACTCATCTGATTAAGCAACACAGAAGACAGGTCAGGACTAGCGTCGATGTGACACGTTTCTCAGCAGCTCGAACCATATTCTTCATTCAGCAATGGCCACTTGGTCTGAGAGGGAACTCTGCCACGATGGCGTCGGAACCAGGCAAAAGAAGCACGGCTCTCCGTCTCCCAGCGATCACCAGTTGTGTTTGTATTTCTTCACCACTCGCGGTTGGGTCTAGACTCTTTACCACTCTTCCGACCCGCTCAGTATATCCCCAGTCAGCGTGTTTCAGACCTCCGGCCTCAGAGAATGATATGTCCAAGGAAGAAGAGGCCCGTCAAAGATGAGGATTTCTCTGCCATCGTGGTGCCCTCCATGAGGGGCCACGGTTATCTGGACTACACCATCGAGAGCCACCCCTCCAGAGCCTTCCAGCTCATGGACGAGCTGCGGCACCACGGCCTGCTCTGCGACCTGGTGCTTCACGTCACGTACAAAGACAGAGTGGTGGATTTCAAGGTACATAAACTGGTGCTGGCTGCTTGCAGCCCCTACTTCAAAGCCATGTTCACCAGCAACTTCAAGGAGTGCAAGGCCTCGGAGATAACCCTGAGGGACGTGTGCCCGACGGTGATCGAGCGGCTGGTGAACTACGCCTACACCTCACGCTTCACGGTGGGAGAGAAGTGCGTCCTGCACATCCTGCTGGGCGCCATGCGCTACCAGATGGAGGACGTGGCCAAAGCGTGCTGTGACTTCCTGGTCAAAAACCTGGAGGCCTCCAACGTGATCGGGATCTCACGCTTCGCAGAGGAGATCGGCTGCGTGGAGCTTCACCAGCGGAGCCGGGAGTACATCAACACTCACTTCagtgagGTGATCAAAGAGGAGGAGTTCTTCAGCCTGTCTCACTgccagctgctggagctgatcaGCCAGGAGAGCCTGAAGGTGCTCTGCGAGACCGAGGTCTACAAGGCCTGCATCGACTGGGTGCGCTGGGACGTGGAGGGTCGCGCCCAGTACTTCCACGCTCTGCTCAACGCTGTACACATCTACGCCCTACCAGCCAAGTTTCTCAAGAGGCAGCTGCAGTCCTGCCCCATCCTGAGCAAAGCCAACTCCTGCAAAGACTTCCTGTCCAAGATCTTCCAAGAGATGACCCTCCGCAAGCCGCTGCCCCCCACGCCGCTCCGGGGCAACCAGCTGATCTACATGTCTGGGGGCTACAACCAGCAGTCGCTGGCCTCGATGGAAGCCTTCGACCCCCACAGGAAAGCGTGGCTGAAGCTGGCGGAGATGGACACGCCCTGCAGTGGTCTGGGGGCCTGCGTGCTGTTCGGGCTCTTCTACTCTGTGGGGGGACGCAACCTCTCTCTGCAGAGCAACGTGGACTCGGAGGCGCTGTGCTGCTACAACCCAATGACCAACCAGTGGACCCAGCTAGCTTCACTGAACACACCCAGAAACAGGGTGGGCATCGGGGAGCTGGACGGAAGCATCTACGCTGTGGGCGGGTCACATGGGTCCATGCATCACAACACGGTGGAGAGATATGATCCAGAGGCCAACAGGTGGACGTTCGTGACCCCGATGTCTGTGTCCCGGCTGGGGGCTGGAGTGGCAGCCTGCGGGGGCGCTCTGTATGTGGTGGGGGGCTTCGATGGAGAAAACCGGTGGAAATCAGTAGAGCGCTTCCAGCCGGACACCAACACTTGGCAACATGTAGCACCTATGAGTACAGTACGAAGTGGCTTAGGAGTGGTGTGTATAGATTCCTACCTCTATGCAGTGGGGGGATACGACTGCCAAACACAACTCAACACTATGGAGAGGTATAACGTGTCCCGAGACGTTTGGGAGCCTATGGCGTCTATGGGGCACTGCCGCAGTGCACACGGTGTCACCGTCTACCAAGGCAAACTCTTCGTATTCGgtggcttcaaccagagcGGTTTCTTGTCCAGTGTTGAGTGTTATTGTCCGGCCAGCAACCAGTGGACGTACGTGACGGACATGCCGGTGGGCCGGAGCGGTATGGGCGTGGCCGTAACAATGGAGCCGTGCCCGGGCTGCCTCCCGGAGGAGGACGAGGAAACGTGAGAGTGAACTTTGACCTGGTCACACTGTCCCTGACGCTCTGAACCTTTGGACACTTTTCTCCGTATCAGAATAAACGCACAATTGCCCAATCAGGCCGAGAAGCTCTGGGACACTTTCGCCAGTCTTCTTCGTGAAGATTTATGATGATTCCGGCATGGCGCTGTGccgtgtttgcgtgtgtgtgtgtgtgtgtgtgtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggacctTAGAAAGCAAGACAGCAATCACTGGACTATGAAGTTGATTAAATAACCtaatgagttttatattttatataattcacTGTGCCTAAGATGTACATTGACACGCTGTCTGACTGCTGAAAATTTGATTTATCAGTTTGCTCTGtatatctgcttttttttttaatgtttaatcttGGATAAAAGACTGAATATTCACA
>XM_015606203.2
GTTTGAAGTTGAGCGCGAGCTCGAGTTGCACAGTCATGCTGATGTCGAAATCGAGGGGAGAGCGCGAGCCAGACGGAAAGGTGGGTCAAGCAAACTGACAGCGGTGCGGCACGAGCCCCGGTGTGGACGTTTGGTTCCGCTTACTGGTTTCCAGTTTAACTGGGAGAGGAGAGGAGTTTAATACTGGGATTTCTGGTGCACGCCCATGTTTGGAGAGTGTATGGCAGCGACACCACACCCAGCCAGTGTTGTTCTGCTTCAGATCGGGAGGATCCAGCTGAATGAACTAGAACTTTCTCGAAGTAGAGAAGTGAAATCGAGGGTGCTTGGACTCGGGGCGCCCGTTCGTAAGAGCATTTTCTGTACTTATTGAGAGAATGATGTAATTATTATACACTCATCTGATTAAGCAACACAGAAGACAGGTCAGGACTAGCGTCGATGTGACACGTTTCTCAGCAGCTCGAACCATATTCTTCATTCAGCAATGGCCACTTGGTCTGAGAGGGAACTCTGCCACGATGGCGTCGGAACCAGGCAAAAGAAGCACGGCTCTCCGTCTCCCAGCGATCACCAGTTGTGTTTGTATTTCTTCACCACTCGCGGTTGGGTCTAGACTCTTTACCACTCTTCCGACCCGCTCAGTATATCCCCAGTCAGCGTGTTTCAGACCTCCGGCCTCAGAGAATGATATGTCCAAGGAAGAAGAGGCCCGTCAAAGATGAGGATTTCTCTGCCATCGTGGTGCCCTCCATGAGGGGCCACGGTTATCTGGACTACACCATCGAGAGCCACCCCTCCAGAGCCTTCCAGCTCATGGACGAGCTGCGGCACCACGGCCTGCTCTGCGACCTGGTGCTTCACGTCACGTACAAAGACAGAGTGGTGGATTTCAAGGTACATAAACTGGTGCTGGCTGCTTGCAGCCCCTACTTCAAAGCCATGTTCACCAGCAACTTCAAGGAGTGCAAGGCCTCGGAGATAACCCTGAGGGACGTGTGCCCGACGGTGATCGAGCGGCTGGTGAACTACGCCTACACCTCACGCTTCACGGTGGGAGAGAAGTGCGTCCTGCACATCCTGCTGGGCGCCATGCGCTACCAGATGGAGGACGTGGCCAAAGCGTGCTGTGACTTCCTGGTCAAAAACCTGGAGGCCTCCAACGTGATCGGGATCTCACGCTTCGCAGAGGAGATCGGCTGCGTGGAGCTTCACCAGCGGAGCCGGGAGTACATCAACACTCACTTCagtgagGTGATCAAAGAGGAGGAGTTCTTCAGCCTGTCTCACTgccagctgctggagctgatcaGCCAGGAGAGCCTGAAGGTGCTCTGCGAGACCGAGGTCTACAAGGCCTGCATCGACTGGGTGCGCTGGGACGTGGAGGGTCGCGCCCAGTACTTCCACGCTCTGCTCAACGCTGTACACATCTACGCCCTACCAGCCAAGTTTCTCAAGAGGCAGCTGCAGTCCTGCCCCATCCTGAGCAAAGCCAACTCCTGCAAAGACTTCCTGTCCAAGATCTTCCAAGAGATGACCCTCCGCAAGCCGCTGCCCCCCACGCCGCTCCGGGGCAACCAGCTGATCTACATGTCTGGGGGCTACAACCAGCAGTCGCTGGCCTCGATGGAAGCCTTCGACCCCCACAGGAAAGCGTGGCTGAAGCTGGCGGAGATGGACACGCCCTGCAGTGGTCTGGGGGCCTGCGTGCTGTTCGGGCTCTTCTACTCTGTGGGGGGACGCAACCTCTCTCTGCAGAGCAACGTGGACTCGGAGGCGCTGTGCTGCTACAACCCAATGACCAACCAGTGGACCCAGCTAGCTTCACTGAACACACCCAGAAACAGGGTGGGCATCGGGGAGCTGGACGGAAGCATCTACGCTGTGGGCGGGTCACATGGGTCCATGCATCACAACACGGTGGAGAGATATGATCCAGAGGCCAACAGGTGGACGTTCGTGACCCCGATGTCTGTGTCCCGGCTGGGGGCTGGAGTGGCAGCCTGCGGGGGCGCTCTGTATGTGGTGGGGGGCTTCGATGGAGAAAACCGGTGGAAATCAGTAGAGCGCTTCCAGCCGGACACCAACACTTGGCAACATGTAGCACCTATGAGTACAGTACGAAGTGGCTTAGGAGTGGTGTGTATAGATTCCTACCTCTATGCAGTGGGGGGATACGACTGCCAAACACAACTCAACACTATGGAGAGGTATAACGTGTCCCGAGACGTTTGGGAGCCTATGGCGTCTATGGGGCACTGCCGCAGTGCACACGGTGTCACCGTCTACCAAGGCAAACTCTTCGTATTCGgtggcttcaaccagagcGGTTTCTTGTCCAGTGTTGAGTGTTATTGTCCGGCCAGCAACCAGTGGACGTACGTGACGGACATGCCGGTGGGCCGGAGCGGTATGGGCGTGGCCGTAACAATGGAGCCGTGCCCGGGCTGCCTCCCGGAGGAGGACGAGGAAACGTGAGAGTGAACTTTGACCTGGTCACACTGTCCCTGACGCTCTGAACCTTTGGACACTTTTCTCCGTATCAGAATAAACGCACAATTGCCCAATCAGGCCGAGAAGCTCTGGGACACTTTCGCCAGTCTTCTTCGTGAAGATTTATGATGATTCCGGCATGGCGCTGTGccgtgtttgcgtgtgtgtgtgtgtgtgtgtgtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggacctTAGAAAGCAAGACAGCAATCACTGGACTATGAAGTTGATTAAATAACCtaatgagttttatattttatataattcacTGTGCCTAAGATGTACATTGACACGCTGTCTGACTGCTGAAAATTTGATTTATCAGTTTGCTCTGtatatctgcttttttttttaatgtttaatcttGGATAAAAGACTGAATATTCACA
>XM_015606204.2
ACAGTCATGCTGATGTCGAAATCGAGGGGAGAGCGCGAGCCAGACGGAAAGGTGGGTCAAGCAAACTGACAGCGGTGCGGCACGAGCCCCGGTGTGGACGTTTGGTTCCGCTTACTGGTTTCCAGTTTAACTGGGAGAGGAGAGGAGTTTAATACTGGGATTTCTGGTGCACGGTGAGTTTTGAAGGAACTGGCAAGCTCCCATGTTTGGAGAGTGTATGGCAGCGACACCACACCCAGCCAGTGTTGTTCTGCTTCAGATCGGGAGGATCCAGCTGAATGAACTAGAACTTTCTCGAAGTAGAGAAGTGAAATCGAGGGTGCTTGGACTCGGGGCGCCCGTTCGTAAGAGCATTTTCTGTACTTATTGAGAGAATGATGTAATTATTATACACTCATCTGATTAAGCAACACAGAAGACAGGTCAGGACTAGCGTCGATGTGACACGTTTCTCAGCAGCTCGAACCATATTCTTCATTCAGCAATGGCCACTTGGTCTGAGAGGGAACTCTGCCACGATGGCGTCGGAACCAGGCAAAAGAAGCACGGCTCTCCGTCTCCCAGCGATCACCAGTTGTGTTTGTATTTCTTCACCACTCGCGGTTGGGTCTAGACTCTTTACCACTCTTCCGACCCGCTCAGTATATCCCCAGTCAGCGTGTTTCAGACCTCCGGCCTCAGAGAATGATATGTCCAAGGAAGAAGAGGCCCGTCAAAGATGAGGATTTCTCTGCCATCGTGGTGCCCTCCATGAGGGGCCACGGTTATCTGGACTACACCATCGAGAGCCACCCCTCCAGAGCCTTCCAGCTCATGGACGAGCTGCGGCACCACGGCCTGCTCTGCGACCTGGTGCTTCACGTCACGTACAAAGACAGAGTGGTGGATTTCAAGGTACATAAACTGGTGCTGGCTGCTTGCAGCCCCTACTTCAAAGCCATGTTCACCAGCAACTTCAAGGAGTGCAAGGCCTCGGAGATAACCCTGAGGGACGTGTGCCCGACGGTGATCGAGCGGCTGGTGAACTACGCCTACACCTCACGCTTCACGGTGGGAGAGAAGTGCGTCCTGCACATCCTGCTGGGCGCCATGCGCTACCAGATGGAGGACGTGGCCAAAGCGTGCTGTGACTTCCTGGTCAAAAACCTGGAGGCCTCCAACGTGATCGGGATCTCACGCTTCGCAGAGGAGATCGGCTGCGTGGAGCTTCACCAGCGGAGCCGGGAGTACATCAACACTCACTTCagtgagGTGATCAAAGAGGAGGAGTTCTTCAGCCTGTCTCACTgccagctgctggagctgatcaGCCAGGAGAGCCTGAAGGTGCTCTGCGAGACCGAGGTCTACAAGGCCTGCATCGACTGGGTGCGCTGGGACGTGGAGGGTCGCGCCCAGTACTTCCACGCTCTGCTCAACGCTGTACACATCTACGCCCTACCAGCCAAGTTTCTCAAGAGGCAGCTGCAGTCCTGCCCCATCCTGAGCAAAGCCAACTCCTGCAAAGACTTCCTGTCCAAGATCTTCCAAGAGATGACCCTCCGCAAGCCGCTGCCCCCCACGCCGCTCCGGGGCAACCAGCTGATCTACATGTCTGGGGGCTACAACCAGCAGTCGCTGGCCTCGATGGAAGCCTTCGACCCCCACAGGAAAGCGTGGCTGAAGCTGGCGGAGATGGACACGCCCTGCAGTGGTCTGGGGGCCTGCGTGCTGTTCGGGCTCTTCTACTCTGTGGGGGGACGCAACCTCTCTCTGCAGAGCAACGTGGACTCGGAGGCGCTGTGCTGCTACAACCCAATGACCAACCAGTGGACCCAGCTAGCTTCACTGAACACACCCAGAAACAGGGTGGGCATCGGGGAGCTGGACGGAAGCATCTACGCTGTGGGCGGGTCACATGGGTCCATGCATCACAACACGGTGGAGAGATATGATCCAGAGGCCAACAGGTGGACGTTCGTGACCCCGATGTCTGTGTCCCGGCTGGGGGCTGGAGTGGCAGCCTGCGGGGGCGCTCTGTATGTGGTGGGGGGCTTCGATGGAGAAAACCGGTGGAAATCAGTAGAGCGCTTCCAGCCGGACACCAACACTTGGCAACATGTAGCACCTATGAGTACAGTACGAAGTGGCTTAGGAGTGGTGTGTATAGATTCCTACCTCTATGCAGTGGGGGGATACGACTGCCAAACACAACTCAACACTATGGAGAGGTATAACGTGTCCCGAGACGTTTGGGAGCCTATGGCGTCTATGGGGCACTGCCGCAGTGCACACGGTGTCACCGTCTACCAAGGCAAACTCTTCGTATTCGgtggcttcaaccagagcGGTTTCTTGTCCAGTGTTGAGTGTTATTGTCCGGCCAGCAACCAGTGGACGTACGTGACGGACATGCCGGTGGGCCGGAGCGGTATGGGCGTGGCCGTAACAATGGAGCCGTGCCCGGGCTGCCTCCCGGAGGAGGACGAGGAAACGTGAGAGTGAACTTTGACCTGGTCACACTGTCCCTGACGCTCTGAACCTTTGGACACTTTTCTCCGTATCAGAATAAACGCACAATTGCCCAATCAGGCCGAGAAGCTCTGGGACACTTTCGCCAGTCTTCTTCGTGAAGATTTATGATGATTCCGGCATGGCGCTGTGccgtgtttgcgtgtgtgtgtgtgtgtgtgtgtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggacctTAGAAAGCAAGACAGCAATCACTGGACTATGAAGTTGATTAAATAACCtaatgagttttatattttatataattcacTGTGCCTAAGATGTACATTGACACGCTGTCTGACTGCTGAAAATTTGATTTATCAGTTTGCTCTGtatatctgcttttttttttaatgtttaatcttGGATAAAAGACTGAATATTCACA

Function

symbol description
keap1a Involved in protein ubiquitination and ubiquitin-dependent protein catabolic process. Acts upstream of or within cellular response to prostaglandin stimulus and cellular response to xenobiotic stimulus. Predicted to be located in cytoplasm and inclusion body. Is expressed in several structures, including digestive system; eye; gill; heart; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in gallbladder cancer. Orthologous to human KEAP1 (kelch like ECH associated protein 1).

NR:

description
PREDICTED: kelch-like ECH-associated protein 1

GO:

id name namespace
GO:0071379 cellular response to prostaglandin stimulus biological_process
GO:0071466 cellular response to xenobiotic stimulus biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007250706.3 False 2749 mRNA 0.54 7 4834841 4854002
XM_015606203.2 True 2932 mRNA 0.55 7 4824630 4854002
XM_015606204.2 False 2929 mRNA 0.55 7 4824659 4854002

Neighbor

gene id symbol gene type direction distance location
LOC103039605 NA coding upstream 62940 4757842 ~ 4761690 (+)
blvra blvra coding upstream 90715 4728467 ~ 4733915 (+)
LOC103038785 NA coding upstream 104986 4714115 ~ 4719644 (+)
LOC103026534 LOC108428888,LOC108268317 coding upstream 166488 4645001 ~ 4658142 (+)
LOC103035953 dbt,LOC108411488,LOC107681723,LOC107715513,LOC108267843 coding upstream 430986 4385618 ~ 4393644 (+)
znf622 znf622,LOC107721690 coding downstream 154134 5008136 ~ 5016931 (+)
d2hgdh d2hgdh,LOC107749221,LOC107678686 coding downstream 163932 5017934 ~ 5026288 (+)
LOC103028041 otomp,LOC108428860,LOC107678687,LOC108267868,LOC107602611,LOC107690301 coding downstream 194150 5048152 ~ 5057696 (+)
rnf220 rnf220,rnf220a coding downstream 275800 5129802 ~ 5276475 (+)
klf17 LOC103372686,LOC107599908,LOC107657420,LOC107739832 coding downstream 578272 5432274 ~ 5435044 (+)
G138969 NA non-coding upstream 33672 4790500 ~ 4790958 (+)
G138945 NA non-coding upstream 86194 4737891 ~ 4738436 (+)
G138944 NA non-coding upstream 87264 4735636 ~ 4737366 (+)
G138941 NA non-coding upstream 167246 4657060 ~ 4657384 (+)
G138925 NA non-coding upstream 297859 4526570 ~ 4526771 (+)
G138976 NA non-coding downstream 48871 4902873 ~ 4903590 (+)
G138977 NA non-coding downstream 53743 4907745 ~ 4936889 (+)
G138978 NA non-coding downstream 71629 4925631 ~ 4925971 (+)
G138987 NA non-coding downstream 174810 5028812 ~ 5030860 (+)
G139082 NA non-coding downstream 442876 5296878 ~ 5297285 (+)
LOC103026815 LOC108428843 other upstream 101856 4673380 ~ 4722774 (+)
LOC103039271 LOC108428890,LOC108268340 other upstream 115967 4703346 ~ 4708663 (+)
G138839 NA other upstream 578766 4237609 ~ 4245864 (+)
LOC103023077 NA other upstream 652620 4165943 ~ 4172010 (+)
LOC111194271 NA other upstream 722389 4095997 ~ 4102241 (+)
LOC103041273 zgc:110158,LOC108428898,LOC108267812,LOC107678694,LOC105906991,LOC107690032,LOC107721784,LOC102197062 other downstream 35871 4889873 ~ 5007006 (+)
G139154 NA other downstream 601478 5455480 ~ 5456004 (+)
LOC107197321 NA other downstream 1205415 6059417 ~ 6060050 (+)
LOC103021569 NA other downstream 1291961 6145963 ~ 6155929 (+)
G139268 NA other downstream 1305718 6159720 ~ 6164164 (+)

Expression


Co-expression Network