Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC103045957 |
| gene name | LOC103045957,LOC108430690 |
| gene type | coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035912.1 |
| NCBI id | CM008315.1 |
| chromosome length | 41032606 |
| location | 3105446 ~ 3108504 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| description |
|---|
| otolin-1-A-like |
| id | name | namespace |
|---|---|---|
| GO:0045299 | otolith mineralization | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| id | description |
|---|---|
| K24214 | OTOL1; otolin-1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_007250726.2 | True | 1827 | mRNA | 0.54 | 4 | 3105446 | 3108504 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC103024237 | NA | coding | upstream | 35495 | 3063927 ~ 3069951 (+) |
| LOC103024543 | fzr1b,LOC108430732,LOC108268046,LOC107719268,LOC107701330,LOC107722096 | coding | upstream | 55670 | 3038419 ~ 3049776 (+) |
| aldh9a1 | aldh9a1,LOC108430735,LOC108267615,LOC107681718,LOC107593789,LOC105891333 | coding | upstream | 79933 | 3017580 ~ 3025513 (+) |
| slc1a7 | slc1a7,slc1a7a,LOC107722044,LOC107671767,LOC107681716,LOC107593788 | coding | upstream | 127001 | 2943136 ~ 2978445 (+) |
| LOC111194192 | NA | coding | upstream | 183328 | 2920719 ~ 2922118 (+) |
| LOC103026425 | zgc:153615,LOC103026425,LOC108430722,LOC107691014,LOC107747506,LOC107599852,LOC107708656,LOC107681829 | coding | downstream | 19241 | 3127745 ~ 3142947 (+) |
| LOC107197652 | NA | coding | downstream | 38743 | 3147247 ~ 3149780 (+) |
| txndc12 | txndc12,LOC107690994,LOC107566463,LOC107708672 | coding | downstream | 42372 | 3150876 ~ 3156054 (+) |
| LOC103046575 | LOC108430689 | coding | downstream | 79228 | 3187732 ~ 3193555 (+) |
| cope | cope,LOC107690966 | coding | downstream | 86044 | 3194548 ~ 3200085 (+) |
| G138092 | NA | non-coding | upstream | 108369 | 2996554 ~ 2997077 (+) |
| G138080 | NA | non-coding | upstream | 205915 | 2897530 ~ 2899531 (+) |
| G138078 | NA | non-coding | upstream | 210036 | 2892643 ~ 2895410 (+) |
| G138074 | NA | non-coding | upstream | 242158 | 2862962 ~ 2863288 (+) |
| G138073 | NA | non-coding | upstream | 256334 | 2847557 ~ 2849112 (+) |
| G138123 | NA | non-coding | downstream | 1898 | 3110402 ~ 3114615 (+) |
| G138524 | gipc2,LOC108430720 | non-coding | downstream | 48252 | 3156756 ~ 3175364 (+) |
| G138534 | NA | non-coding | downstream | 148397 | 3256901 ~ 3296382 (+) |
| G138598 | NA | non-coding | downstream | 384192 | 3492696 ~ 3494363 (+) |
| G138593 | NA | non-coding | downstream | 396072 | 3504576 ~ 3506945 (+) |
| LOC103024858 | NA | other | upstream | 20581 | 3082056 ~ 3084865 (+) |
| LOC103045052 | cfap57,LOC106594647 | other | upstream | 169317 | 2900475 ~ 2936129 (+) |
| G137929 | NA | other | upstream | 1081060 | 2022755 ~ 2024386 (+) |
| LOC103042893 | vps4b,LOC107727524,LOC107681797,LOC107710065 | other | upstream | 1254133 | 1835477 ~ 1851313 (+) |
| G137826 | LOC108430781,LOC108267757 | other | upstream | 1605490 | 1491816 ~ 1499956 (+) |
| LOC103026108 | selenot,selt1a,LOC107681817,LOC107708642 | other | downstream | 6916 | 3115420 ~ 3119488 (+) |
| LOC103047488 | pls1,LOC108437523,LOC107722705,LOC107656864,LOC107565818,LOC107599860,LOC107709028,LOC107681752 | other | downstream | 693349 | 3801853 ~ 3839372 (+) |
| G138701 | NA | other | downstream | 724751 | 3833255 ~ 3834460 (+) |
| LOC111194271 | NA | other | downstream | 987493 | 4095997 ~ 4102241 (+) |
| LOC103023077 | NA | other | downstream | 1057439 | 4165943 ~ 4172010 (+) |
