LOC103039154 (LOC103039154,LOC108440646,LOC108268154)


Basic Information

Item Value
gene id LOC103039154
gene name LOC103039154,LOC108440646,LOC108268154
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 14452340 ~ 14458287 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007260196.3
TGCAACTCTCAGCAGCAGATAATAAGCTTAGCCATCCTAGCTGGCCTACACCAGGACACAGGGGTCAATTCCTGGATTATCACATCTCACTGGAGACTTAGCCATCGCAATCCCTCTCGTTTGTGAGTTTTTCATgtgtaaatcttttttttctgaggaGTTTTTGAATGCAATTATCTTATATAAGTGGTTGCTGCCTGAAAACAGGAGGATAAGAGCAGCGATGGTAATACCTGGCCTTCAAACGATCAGGAGAAGTTGAAGATGGAGAGGGGAGTTTAGATCGGGTAGACCCTCAAGCTTCCAGACAGCAGGACAGGGGGTTCAAACCCTGTCCACCTGAACCAACATCCTCATGCCGCTCTCTAACTCGAAGGTTGCTGATGATGGATCTTCAGCACAGCCTCAGCGAGAGGGGCAAGCCATGGTGGACTCCCTTACAAAGGTGGTGGCATGTTACCGGCACCTGGCCTCCTGCATCGGTGGCTCAACAGACAGTACAAGCCTGCGACAGGAGCTTCGTCAAACCCGAGAGCATGCTCAGACCCTCGCAGTGTCCTGCCGAAACCACCTAACAGCCCGACTGAGGGATAAAACTCTGTCTGAAGAGGACAGGAAGGAGACAGAGCTGCAGTGGGTGGCCTTCTCCTCCTGCCTGGAGCTCTTCCATGCTGACATGTGCAAGGTCTACCACATGGGCAGCTGTTTCTCTGTGGCCAAAAAGAGTGCCATGGTGCAGACAGGCCTGCAAGGAGGTGCCACTGAAGTAGCAGCCCGTGCCCTGAGCATGCCCAACCTGCAGGAGCAGAATGGTGAGCAGACTGCTAGCATGGAGGGCCTGGACCAGAGCCAGCTGGAGCAGGAGATTGCGCAGGTGGACCGCACTCTGGAGGACATGGAGATGAAGGTCAACGTGCTGCGCTGGACGGTGGAGGCCAAAGGGCCTCAGTACGCAGATCCAGTCAGTGTTGACAGTGCGTCCCTGGCACTCCTGTCGGGTGATGAGGAGGGGGGATTTTGTGACCGCAGTCAGATGTTCgtgctgctgatgctgtgcGGTGTTGCcctggttgctgtggtgctcTCGGTGTGTGTAGTTTACCTGGCCTGAAGAGCAGTCAAGAGAAAGACCATATGTGTACGTTGCTTGGAGAGGCTGGTGATGCCTTTTCCCCAGGCCTCTTTAAACTTTACCTCAGAGGATTGTTTCTTTAAGGAGATGATCAGCACCAACAGTTCTTAAAGTTGGAGGAACACTCATGTCTACATGATACATGatctatagctctggaaaaaaataagagaccacttcagtttctgaattatcTGATtatgctatgtataggtatatgtt
>XM_022678077.1
TGCAACTCTCAGCAGCAGATAATAAGCTTAGCCATCCTAGCTGGCCTACACCAGGACACAGGGGTCAATTCCTGGATTATCACATCTCACTGGAGACTTAGCCATCGCAATCCCTCTCGTTTGAGGATAAGAGCAGCGATGGTAATACCTGGCCTTCAAACGATCAGGAGAAGTTGAAGATGGAGAGGGGAGTTTAGATCGGGTAGACCCTCAAGCTTCCAGACAGCAGGACAGGGGGTTCAAACCCTGTCCACCTGAACCAACATCCTCATGCCGCTCTCTAACTCGAAGGTTGCTGATGATGGATCTTCAGCACAGCCTCAGCGAGAGGGGCAAGCCATGGTGGACTCCCTTACAAAGGTGGTGGCATGTTACCGGCACCTGGCCTCCTGCATCGGTGGCTCAACAGACAGTACAAGCCTGCGACAGGAGCTTCGTCAAACCCGAGAGCATGCTCAGACCCTCGCAGTGTCCTGCCGAAACCACCTAACAGCCCGACTGAGGGATAAAACTCTGTCTGAAGAGGACAGGAAGGAGACAGAGCTGCAGTGGGTGGCCTTCTCCTCCTGCCTGGAGCTCTTCCATGCTGACATGTGCAAGGTCTACCACATGGGCAGCTGTTTCTCTGTGGCCAAAAAGAGTGCCATGGTGCAGACAGGCCTGCAAGGAGGTGCCACTGAAGTAGCAGCCCGTGCCCTGAGCATGCCCAACCTGCAGGAGCAGAATGGTGAGCAGACTGCTAGCATGGAGGGCCTGGACCAGAGCCAGCTGGAGCAGGAGATTGCGCAGGTGGACCGCACTCTGGAGGACATGGAGATGAAGGTCAACGTGCTGCGCTGGACGGTGGAGGCCAAAGGGCCTCAGTACGCAGATCCAGTCAGTGTTGACAGTGCGTCCCTGGCACTCCTGTCGGGTGATGAGGAGGGGGGATTTTGTGACCGCAGTCAGATGTTCgtgctgctgatgctgtgcGGTGTTGCcctggttgctgtggtgctcTCGGTGTGTGTAGTTTACCTGGCCTGAAGAGCAGTCAAGAGAAAGACCATATGTGTACGTTGCTTGGAGAGGCTGGTGATGCCTTTTCCCCAGGCCTCTTTAAACTTTACCTCAGAGGATTGTTTCTTTAAGGAGATGATCAGCACCAACAGTTCTTAAAGTTGGAGGAACACTCATGTCTACATGATACATGatctatagctctggaaaaaaataagagaccacttcagtttctgaattatcTGATtatgctatgtataggtatatgtt

Function

NR:

description
regulator of G-protein signaling 9-binding protein B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007260196.3 True 1354 mRNA 0.52 3 14452340 14458287
XM_022678077.1 False 1269 mRNA 0.53 4 14452340 14458287

Neighbor

gene id symbol gene type direction distance location
scrib scrib coding upstream 43940 14272829 ~ 14408400 (+)
LOC103037989 puf60,LOC108268151,LOC107598708,LOC107742128,LOC107659444,LOC105889354 coding upstream 182434 14256872 ~ 14269906 (+)
LOC111194316 NA coding upstream 232993 14216110 ~ 14219347 (+)
LOC103035806 ctnnd2,ctnnd2b,LOC107746909 coding upstream 309729 13938285 ~ 14142611 (+)
gpr141 NA coding upstream 533728 13900908 ~ 13918612 (+)
LOC103039460 LOC108268156 coding downstream 3703 14461990 ~ 14472520 (+)
LOC111194238 NA coding downstream 19267 14477554 ~ 14488421 (+)
LOC103041924 NA coding downstream 30144 14488431 ~ 14500190 (+)
LOC111194240 NA coding downstream 53506 14511793 ~ 14512939 (+)
LOC111194241 NA coding downstream 57183 14515470 ~ 14517074 (+)
LOC111194202 NA non-coding upstream 10008 14440905 ~ 14442332 (+)
G141467 NA non-coding upstream 215688 14222563 ~ 14236652 (+)
G141459 fam173b,LOC108440663,LOC106941709,LOC107578923 non-coding upstream 238076 14210460 ~ 14214264 (+)
G141415 march6,LOC107686038,LOC107746911,LOC105900596 non-coding upstream 243524 14202989 ~ 14208816 (+)
LOC111194315 NA non-coding upstream 253693 14182044 ~ 14198647 (+)
G141501 NA non-coding downstream 26733 14485020 ~ 14486617 (+)
LOC111194203 NA non-coding downstream 59059 14517346 ~ 14518444 (+)
G141514 NA non-coding downstream 87510 14545797 ~ 14547039 (+)
G141516 NA non-coding downstream 94346 14552633 ~ 14553089 (+)
G141525 NA non-coding downstream 107097 14565384 ~ 14567961 (+)
G141410 NA other upstream 251342 14180665 ~ 14200998 (+)
G141361 tcea1 other upstream 593735 13855603 ~ 13858605 (+)
LOC103029537 adcyap1b,LOC103029537,LOC108437223,LOC107713980 other upstream 1592013 12842798 ~ 12860327 (+)
G141086 NA other upstream 1708887 12741473 ~ 12743453 (+)
G140930 NA other upstream 2070786 12378996 ~ 12381554 (+)
G141495 NA other downstream 69853 14528140 ~ 14530296 (+)
b4gat1 b4gat1,LOC107747893,LOC107745213,LOC107696735 other downstream 320894 14779181 ~ 14784812 (+)
G141740 LOC108440267 other downstream 596370 15054657 ~ 15056973 (+)
G141791 NA other downstream 770423 15228710 ~ 15285457 (+)
G141754 pnp5a,LOC108440276,LOC103368940,LOC107747996,LOC107692836,LOC107728028,LOC108267282,LOC107570765,LOC107703870 other downstream 927329 15385616 ~ 15401904 (+)

Expression


Co-expression Network