LOC103043149 (dhrs1)


Basic Information

Item Value
gene id LOC103043149
gene name dhrs1
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 6958536 ~ 6969199 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_015608064.2
TTGCATGTCATCCTCAGTGAAAGCAGAGTCAACAGTAGGCTCAGTCAGACTGTACCGAGTAACGTTAGCAGCCGGAGGAGTAGGATTTATATAGGCGGGTTTTTACATCAGCTACACGTTTTACAGCGAGCTAAAGAGatggcgctctctggctgggtgtgtgtggtgacCGGTGCTTCTCGGGGGATTGGAAAAGGAATAGCATTACAGCTTTCTGAagctggagctacagtctacaTCACGGGCAGACAGAAGAAGACCCTGGAGCAGACTGCAGCTGAGgtgagtgagagagggggTCGGTGTCTGCCAGTGATCTGTGACTCGACGAAAGATGACGACATAAAGGAGCTGTTTGAAAGAATTAAAAGTGAGCAAAATGGAAGACTGGACATCCTGGTGAACAATGCGTACGGTGGAGTGCAGCAAATTTTTGACAACATGGGGAAGAAATTCTGGGAGATGGATCCTTCTGTTTGGGATGACATTAACAACAGTGGTCTCAGGGGGCACTATTTCTGCAGTGTCTATGCTGCCCGCATGATGGTCGATCAGGGCAAGGGCCTTATTGTTACCATATCCTCCATGGGTGGCTTAAGTTACCTCTTCAACGTGCCCTACGGGATTGGCAAAGCTGCATGTGACAGACTGGCTGCAGACACTGCGGTGGAGCTGAAGAAACGAGGGGTGGCCTCTGTGAGTCTCTGGCCGGGTGCAGTGCAGACAGAGCTTGTTTCCCAGAACAtcatagagaaagaaaatgtttcagGCTTATACCCAAATTGGAAGAAAATGTTCAGTCAAGCTGAGACGACAGAGCTGAGCGGAAGATGCATTGTTGAACTGGCCAAAGacaAAAATCTGATGTCTCTCACGGGGAAAGTCCTGCTGACATGTGATCTTGCGAGACGATATGGAATACAAGATGTTGATGGTCGTGACATCATAGATTATACCTCTCTGAAGTTCCTCCTCACTCAGTCTCCATACATGTCCTGGCTCTCCGTCATCACGCCTTCATTTATCAGAGTGCCACGGTTTGTCTTCAGCTTGGCCGCCAGCAAGTTCTGATCAGCATGAAGAGGCTCAGATTTAAACCGTTATTAATGAAGGAAACAGTCATAACAGGCACATATCACATGTTTGTATGTTAACGGCATTTACATAACCAGCAAATTCATATAAGACACAATGCTACGAGTAACTACTTTCTGATATATCAGTAAAATAGACACAATGCATTTTGTATCATTTCAGTACACATTTAAAGGATCCACAATAAACTTTATTACATATGTTAATCATTTACATGATTACTAGGGTTATAAACAGTATTTGCACTGTAGGTCCAtagattttattatattatattcatagAATATTCTATGCAAAAGAGAGAATCCAGAGAAAGTAcatttgttttttccatgaatgTAATTTCcatagatacatatatatttctcttgttggaccattttcttttctttcttgctttaaacattttttaattcaacTATTGCTGATTTACATATCCATTTCCTACTGAGAttcaattttattaaaaacaatttttaaatgGA

Function

symbol description
dhrs1 Orthologous to human DHRS1 (dehydrogenase/reductase 1).

NR:

description
PREDICTED: dehydrogenase/reductase SDR family member 1

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K11163 DHRS1; dehydrogenase/reductase SDR family member 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_015608064.2 True 1580 mRNA 0.42 10 6958536 6969199

Neighbor

gene id symbol gene type direction distance location
c16h14orf119 NA coding upstream 8392 6945678 ~ 6950144 (+)
LOC103041213 LOC103041213,LOC108438939,LOC107591383,LOC107704286,LOC107668983,LOC107557973,LOC107738136,LOC107706348 coding upstream 66637 6864807 ~ 6891899 (+)
LOC103040698 NA coding upstream 106273 6842902 ~ 6852263 (+)
LOC103039234 NA coding upstream 194665 6757423 ~ 6763871 (+)
LOC103024078 LOC108438945 coding upstream 204123 6744942 ~ 6754413 (+)
LOC111194294 NA coding downstream 6772 6975971 ~ 6989371 (+)
LOC103024705 NA coding downstream 26354 6995553 ~ 7004249 (+)
LOC103043453 NA coding downstream 36265 7005464 ~ 7018530 (+)
LOC103025339 psmb11,LOC102219341 coding downstream 190821 7160020 ~ 7162262 (+)
psmb5 psmb5,LOC108438927,LOC107668975,LOC107558100,LOC107706341,LOC107694665 coding downstream 195585 7164784 ~ 7184403 (+)
G139375 NA non-coding upstream 25063 6931518 ~ 6933473 (+)
G139371 NA non-coding upstream 48875 6853944 ~ 6909661 (+)
G139362 cbln12,LOC103040079,LOC108438942,LOC107738140,LOC107591379,LOC107668986,LOC107557939,LOC107704284 non-coding upstream 135850 6821915 ~ 6822686 (+)
G139347 NA non-coding upstream 190292 6768023 ~ 6768244 (+)
G139328 NA non-coding upstream 350879 6559387 ~ 6607657 (+)
LOC111194296 NA non-coding downstream 60083 7029282 ~ 7039380 (+)
G139395 NA non-coding downstream 77219 7046418 ~ 7049729 (+)
G139401 NA non-coding downstream 117778 7086977 ~ 7087682 (+)
G139710 NA non-coding downstream 222709 7191908 ~ 7192404 (+)
G139712 NA non-coding downstream 233733 7202932 ~ 7203256 (+)
dhx9 dhx9 other upstream 216467 6718238 ~ 6742069 (+)
G139282 NA other upstream 691149 6266816 ~ 6267387 (+)
LOC103028159 NA other upstream 715965 6235434 ~ 6242571 (+)
G139268 NA other upstream 794372 6159720 ~ 6164164 (+)
LOC103021569 NA other upstream 802607 6145963 ~ 6155929 (+)
LOC103044361 nedd8,LOC103358415,LOC107588156,LOC107562413,LOC104953875,LOC108438931,LOC106608856,LOC106577802 other downstream 72361 7041560 ~ 7046298 (+)
LOC103030954 NA other downstream 2192134 9161333 ~ 9162523 (+)
LOC103030224 NA other downstream 2251075 9220274 ~ 9223981 (+)
G140062 NA other downstream 2570576 9539775 ~ 9540810 (+)
G140103 NA other downstream 2774499 9743698 ~ 9745355 (+)

Expression


Co-expression Network