smchd1 (smchd1)


Basic Information

Item Value
gene id smchd1
gene name smchd1
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 23190464 ~ 23250746 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022677622.1
TGTTGCTAATTTTTAATCTTAGTGTCGTAGCTAAACGTTTCGTTTGTTGTCTTATCATCTCAGCTTATTTTAGTACTCGTGTAGTTGATATGGCTAGGTTGAACAAGAGACAcagttgctttttattttattagttttattcttATATATGCCCCTAACGTTGTTGTCAGTGCAAGTAGTTAGAGACTCCAGATGAGAATCTGGCAACCCTACCACTAGCAAACTAGCGCGTGGAGACTGACAACACTGTAGCTCCAGTGTATCACATGGTTCAGAGGTGTGGGAGGTGTAGGAAGCCTCCAGTACTCAACGCTGGGCACTGGATGTtcagctagctaagctaagccaGTCAATAACAGCCCGGATAAGCGCCGCTGTCCGCTTGTATGCCTGAGCGAGCATGTCGGAAGCGGAGCGGTGACGCGTTTCTCTCTCAGTTTCGCTTTGGTGGAGCGGAGACAGATATCAGACCTGAGACAGaggcagcagaaacagcagggCAGAGGAACATGGCGGACCTGGGGGCTCCCCGAGCTGAGCCCGAGCCTGACAACCGCTCGGTTTACATCTACGACTGTCGCCCGGAGAGCAGAGAGTCCTctgagagggagatagagatcAGCGGTAAAGACTTTACTCAATTCCTTCAGGCTGTCCGCAAGgaGTTTTCTATCACTCGAAAAGATGCTTTTGTACTCACTACCACAGATCGCAGGGAGATCAATAAAGACATTTATGGAGAACttgcaaatggcaaaacattaCACCTTCTACAGTCTGTGGATCAAGAGCTGACCAAGGCAACTCAAGAGCGAATTAATTATCTTCCACATTACCACACCATCGTGCAGAGTGGACAGTATGAGTACTATGCAAGTGAAGGACAGAAAGCACTACcctaCGCTTTTGCTGAGCTCATTGATAATGCACTTTCCGCCACTTCACGTAATCCTGGAGTCAGGAGGATTGACATCAGACTGTTGTTTGATGAGTCTCAAGGTGGTCCAGCTGTAGTGGTGATGGATAATGGTCGTGGGATGACCTCTAAAGAGTTAAACAACTGGGCTGTTTATCGCCTTTCTAAATTCAATCGAGAAAACAGCACTTTTCAGAGGTGCTTCTTCAGGTCAAGTCCAAAGGAAACTTTGAATCCTGAGCCTCTGGCACAACCAGGATGTGAGGAGTATGGTGATAGCGTGAAAGAGAACAGGAGTGATCATTCTGGATATGTGCGTCCCACTCCAGTACCACGCAGTCTCAACAGCGACATCTCCTACTTTGGCGTCGGAGGCAAACAGGCCGTGTTTTATATCGGCCAGTCTGTACGGatCATCAGTAAGCCGGTCGGCTCTCCAGACGTACACGAGTTTGTCATGTCTAAAGAAGACTTTGAGcggaaagagaaaaacaaagaggaGATTTATTCAGGGATTATCCGCAACCGGAAGCCTGGGGACTGTTCTCATGTGAAAGTAGATGAAGAGCGGTTTTTGCAGTCTCTCATTCTGGAGGAGGAAGGCAAGGACAGCTTCACCGCAATAGTCATAAACAGAATCCAGCCAGAACATGTTACCTACCTCAGAAATGACTTCATCTTGTGGACAAGAGAGTTGGCGCACATCTATCATTACTACGTTCATGGTATCCATggaaatgacttaaaaaatgAGAAGAAGGCAGATTCTCCATCAAACATCGACATACAGATCTGTCTGCTCGAGCGTTCCCCTCGGTTACCAAAACTGATCAATCTGAGGGAAATCGATAAAGACATGCAGACTCTTTATATAAACTCCAGTGTGGCAGAGTTTGAGTTTAAAGCCAGTAAAGGGAGCGACGCCAGAGTAGAGGGACTGATCAGATATCATCCATTCCTGTATGACAAAGAAACCTACCCAGAGGACCCATACAACTCAACACCagtTGCAGAAAATGACGACGAtgactgttttatttttcaagCTGAGGGACGAGGAAAAAGACCCATTTTTGAGTGCTTCTGGAATGGACGATTAATTCCTTATTCTTCTGTCAATGAgTTTGAGTGGTGTGCAAAACCCAAGAAAATGTGTACAGTGCCTTTAGAATGCTACAACAGAATCTCAGGTGTTCTCTTCGCTAACGACTGTTTTCAAGTCAGCACCAATAAACTCACATTTATGGATCTGGAACTGCAGCTACGAGACAAAGAAACCATCTTTACCAGAGTCCTTAACAGCCAGgagCAGAGAGTGAAGATCAGTCGAGAATTCACGATTTGGTTAAAAGAATGTCATGAACGATTTGacaaacagGTGAAGTTCATTGGTTACCATGGTACAACAACTCGCACAGATGTCTCATCTAAGCGGCAGCAGTCGCCATGGGCTCGGTTCAAAGGCATCCATTGGGACGGCAAAGTCTACAAGGCTGGACAGCAAGTGAAATCAGTGAAAACTCAACCTATTCTGTTTGGCTCCATAGTTCAGTTTCTGCTCTATGGAGACCATGAGGGGGACGTCTACGCCACTGGGGGACATGTTCAGATTGCACTGGAACCGCAGGAACTGTATAATGAGGTTCGAATTATTCCAATATCCAAGATCGACAGACAGGCAACAGATTCTGCCATCAAGAAAAGCATTGCTGAAGAACTGGCCAAGCTTCCTGATCAGTTGAAGGTTTCATGGCCAGAAGGAAACCCGTGGCCTGACAAGGCTGTTCGTCCAGCTGGCACTCCTTTAgGTCCAATCCAAGTGCATATTCTGAATAAGAAAGGAGAGACGATGTCCCGGCTGCCGGTCTCCAACATCAACGCCAAAAAACTCCTGATGGAGCTGAAAGTCATCTGGCACTctcCTAAAGGGGATGTCCAGACAAACTCTCACATTTGCATGCACTCCACCAAGTGGGAGTTCTGGTTCAAAGTAATGGaaaACTTGAATAAATTGGGAAAGTACACACTTTGCTTGCAGACTTTGCTGAGTGATAGTGAGTCAGCTAGTGAGTGGGCTGGGAAACGTCTGCCTCAGTATGTGCTTCACTTCACTATTAAAGAAAGCAGTGCAGCATGCTTTGTATTGCGCTCAGTTCCCACGTCAGTGCAGGTGGGCGTGCCCTTCTCTCTGAACCTGGAATTTAAGGATGAATTTGATCATGTGACTCAGCCCCCATCTGACATCAAACCCCAGCTAGAGTGCAGTTCACTGCAGCTAAATTACGAGCAGACAGCTTTGAATGGAACTACATTTACCGTACAAGACCTGAGAGCCAAGGGGAAAGTAACAAACCAGCTGGAGAAGGTTCACACGGTGAAAGTCATCGTCCCAGGCCTCAAACAGGACTTCCAGTCTTTCCAGTTTAGTGTTCGTCCAGGTCCTCCACAACAACTGGTGGTTTTTCCTGAGAACGACATCTCTATAGAAAACGGATCACCAGCAGGATTTAAAGTGGAGGTTCACGATGAGTTTCAGAACATCACAACACATTCCAAACTCATCGTCCGCTGCCAGTTATTAGGAGCCCCTGATTTACCTGTGGATACTGTTGACTGCAGTAATACCGGCACAGGGGTGCTGCTCGCAAAACCAGTTCAGCTGAAGAATGTCACCACTGAGCAAGTCCTCACTGCCAAGTTTGGCATTCCTAACCAGAAGGGAATATCTTGTGTGGAGCGGAGTCTGCGCGTGCTGCCCAGCACACGTGTCTTCCGTGTGGAGATTTACAGGCAGGATTCGGATGATGTCATGTTGATTCAGAATCTGGAACGAATCAACTGGACAGCAGGAGACACACTCGGGAGTCTGCGCTTCAGACTGTATGATGAAGGAGGCAGGCTGGTGCCTTTAACACACAAACTTGCACATAATGTAAAGGTGAACTGGACTGCAGGCGTAAGGACAGCAGAACTGGCTAAGGGAAGACTTCCAAATGTTTCTGTTCCAACGAAAGTACAGAGAGAGCACTTCTATCAGGTGTCTTTTACGGATCAGCAGTCAGTTGAGACGTCCTTTTTCATAATCCCACGTCCAGATGAACCTGACAAACTGAGGGTCACTCTCAGAGAGAACACTGTGAAAATGGGAGAAACTCTATCAGAAAATATCTCCGTTGAGGTGGTTGATCAGTATGGTAATAAGACAGACACTCTGAATGCTGAGAACATCAAGACAGTCAGTGTTCACGCAGATGACCTGGATGTGTCCACCCTCAGTGTCGATTGGCAGgaAAGCTCAGGCACTGTGTTGGTGAGTGGTGTGCGCTTCACTGGAGGCTCACCGGGTTCCAGGGAGTTGTGCTTCAAGTACCAAGAATTTGAGGAGTTTGCCAGAGTAAAGGTCACTGCTGGACCCCCTGCTAAAATCACGCTGGTGGAAGCTCCAGAAATGCCGTTACATGTGTTAAACGGACGAGGTCTGGACACTCCGTTCCTGCTACAGTTATGTGACAAGTGGGAAAACCCTGTTCCAGATCAGCGAGTTGTCATAGCGATCAAAACGCTTTCAACACAGCTCAAGGTTAAATCATCAGTGATGTCCCGGCCGGTGGATCCAGACGGAAAGGCTTGCTTCAAATTGGAGATGGTGACGGCACCAAAAGGAGAGCATGAGCTGGAGTTCCGCGGATCCTTCAGTAGAAACAGTATTCCTGGTCCGGTGGTGAAGCTGAACGTGATGCCTGATCCCAACAACCCCGTCAAACTTACTGTGGAATATGATAATGAGGCCATCTTAATAGCAGGAGACTTTTTGCCAGAGTTTAAAGTGATggtggtctctgaagaaggTGGTCCGGTGAAGAATGTGAATCCAGCCAGTCTGACCATGCTGCTGTGGCAGGGTTTAGCCGCAGGAACCCGCCCTCCTCCTGAGGCAACAAATTTTAAGTGCAGTCAACAGGATTCGGACATCTTTTACTTCAGagacAAGGAGATTCCAGAACATGTAGGAAAATACATTGTGCAGTTTGTCTTCGTTGGAGAAAAAGGCAAGTTCCTCTGGAGCAGTCAGATTGCTCTGAAGGTAGTTCATGATAAGCCAGTGAGGCTTGTTCCAGAGTCTTCTCCTGCAACCCCCGTGGTCTCTAACAGCGATGCTGGTAATCGCACACTTCTGGACAGTTTATGTCTGAAGATTATGGACAAGTACAACAACCCTGCTGGTACGGGGAAAAACGGGCAGGTGGTTGTAACAGTGATCGGTGCTGCAGGAAGTAAAGCAAAAGATCTTCCTCTGTTTGAGAAGAAGGCCAAAAGTGTATCCTACAAACTCACAGAAGGAGAAGCCACCATCACTggcttGGCACTGATGGAGAACAGTCCTGGATGTGATGGAGCTGAGTACACACTGCAGTTCCAGCCGGTGATCGAGGGACCTGGACCCAGTCCTACCATCACTCCGTTTACATTACCTTTCAGGTTCTACAATGATGCAGAGAACCAGAAAGTCATGGCTGAGATGAGTAAAAAGAAAGATCAGCTCTCTCACTCTATTGTTCTGTACAAAGGCATATTAGACACCCACACGCAGCTGGCTTCTGAACTAGAAAGTCAGGTGCGCGATGCATCAAGCAGAGAGACTCAGTGCAAATCAGAACTGAGCAAAAGTGGTATAGATGTTTCCAAATTGCGAACTGTGTCAGCAGTTGACAGTTTGATTGCTGAAAAGAAAGCAGATATGGAGAAGATACAGAATGCACCTCGCCGAAAATGCACCATGCCTGATTCATTTAAAGGCAGTCCAGATGTGCTGggaaagATAGCACACCTGGCACAGGTGGAGGATGATGATGCAGCAAAGGTCATCTCCTGGCATATTCTTGGTGACATGGACTGTGTGGTTACAGTAACAACAGCTGCAGCAAAGAAAATCTATGATGACACGCAAGGACGACAACAAGTCATGCCCTTAGAGACAGTTTTCTGGAGACCAAATACCAGGCCTCTGCCTCACATCAGGAATGAAGAACCTTTATTTAAGCCGTTAGGAAACCCTGTGTTTGTCCGAGATCTGCTCATTTTTCCTGAGCATGAAGAGAACTGCAACAAGGTTTTTTCAACTGTTGTTGGAGACACAATATTGGTGGATGATCTGGACTCTGCTAATCATTACCGTAAGGGGGTGGTGCAGAATAAGGTGCAGTGTCCCACGCTGCTGACGCGTCAGGGTGAGCGGATTCGTGGTAATGGAAAGTTTGGGGGTCTGCAGAATAAAGCTCCTCCAATAGAGAAGTTGAGAGGACAGGTGTTTGGAGCACCTCTGCCTGAAGAATATCACACCATATCCAAACAGATAGagCTGCTGCAGCAGTACTCTGTGGCGGTACAGAAAGCGTCAGAGGTCCGAGCTGATTTTGACGGTCACATGCTTTACCTGAAGAGTCCGGAGATGAAGCAGAAACAGCGGGAGCTTCAGGATCAGGAGAAGACTCTAAAGGACATCGAGAAGAAActagCCAGCACTCCTGTACGCAGTTCTCCTGTTTCAGTAGCCAAACGAAACCTCCTAGAGGAGCCTGATGAGACCCTTCCTGCTAAAAGGATTCGCCGTAAAAAAAGAATCCTGGaTTCTTAGACAATCGTCTCAGACCAGCCTGCAAAATCATCTCTATTAAGTGTTTATCTGAACAGCTGCAAAAAAACTTCTTGTTTGGATTTTGGAACAAAAGACTTTTTTTCTTGTATGTTAAAAAGGGATCACCAATTTTTTAAAAGACTGTGAGGATTTTCTGTCCCACTAATACTACATACAGTAGTTGCTTAATTtctagcttttttattttattttttattattgcttgcCTTTTATAAAGATAACTATTATCACAGATTTCTAACgtaaaacattttctgtttgTATTTAATAGAAAAGGCAGCTCAAAAGTTATGGACTATGTCCAGAATGTGATTTCTATGtttctgttaaaaaatataatgtgtttgttttctatAATTGTTATCTCACagcactgttttttattttttaaatatatatttgttatctTACAGCACTGTCTTtttattcttcaaatatataaTTGTTATTTTACAGCACTCTCTTTTTATCATTTGAATATATAATTGTTATTTTGCAGCTTTTTTATCTCTGAATAAGATTTTTCTTATATCTgc
>XM_022677623.1
GCTAATTTTTAATCTTAGTGTCGTAGCTAAACGTTTCGTTTGTTGTCTTATCATCTCAGCTTATTTTAGTACTCGTGTAGTTGATATGGCTAGGTTGAACAAGAGACAcagttgctttttattttattagttttattcttATATATGCCCCTAACGTTGTTGTCAGTGCAAGTAGTTAGAGACTCCAGATGAGAATCTGGCAACCCTACCACTAGCAAACTAGCGCGTGGAGACTGACAACACTGTAGCTCCAGTGTATCACATGGTTCAGAGGTGTGGGAGGTGTAGGAAGCCTCCAGTACTCAACGCTGGGCACTGGATGTtcagctagctaagctaagccaGTCAATAACAGCCCGGATAAGCGCCGCTGTCCGCTTGTATGCCTGAGCGAGCATGTCGGAAGCGGAGCGGTGACGCGTTTCTCTCTCAGTTTCGCTTTGGTGGAGCGGAGACAGATATCAGACCTGAGACAGaggcagcagaaacagcagggCAGAGGAACATGGCGGACCTGGGGGCTCCCCGAGCTGAGCCCGAGCCTGACAACCGCTCGGTTTACATCTACGACTGTCGCCCGGAGAGCAGAGAGTCCTctgagagggagatagagatcAGCGGTAAAGACTTTACTCAATTCCTTCAGGCTGTCCGCAAGgaGTTTTCTATCACTCGAAAAGATGCTTTTGTACTCACTACCACAGATCGCAGGGAGATCAATAAAGACATTTATGGAGAACttgcaaatggcaaaacattaCACCTTCTACAGTCTGTGGATCAAGAGCTGACCAAGGCAACTCAAGAGCGAATTAATTATCTTCCACATTACCACACCATCGTGCAGAGTGGACAGTATGAGTACTATGCAAGTGAAGGACAGAAAGCACTACcctaCGCTTTTGCTGAGCTCATTGATAATGCACTTTCCGCCACTTCACGTAATCCTGGAGTCAGGAGGATTGACATCAGACTGTTGTTTGATGAGTCTCAAGGTGGTCCAGCTGTAGTGGTGATGGATAATGGTCGTGGGATGACCTCTAAAGAGTTAAACAACTGGGCTGTTTATCGCCTTTCTAAATTCAATCGAGAAAACAGCACTTTTCAGAGTGATCATTCTGGATATGTGCGTCCCACTCCAGTACCACGCAGTCTCAACAGCGACATCTCCTACTTTGGCGTCGGAGGCAAACAGGCCGTGTTTTATATCGGCCAGTCTGTACGGatCATCAGTAAGCCGGTCGGCTCTCCAGACGTACACGAGTTTGTCATGTCTAAAGAAGACTTTGAGcggaaagagaaaaacaaagaggaGATTTATTCAGGGATTATCCGCAACCGGAAGCCTGGGGACTGTTCTCATGTGAAAGTAGATGAAGAGCGGTTTTTGCAGTCTCTCATTCTGGAGGAGGAAGGCAAGGACAGCTTCACCGCAATAGTCATAAACAGAATCCAGCCAGAACATGTTACCTACCTCAGAAATGACTTCATCTTGTGGACAAGAGAGTTGGCGCACATCTATCATTACTACGTTCATGGTATCCATggaaatgacttaaaaaatgAGAAGAAGGCAGATTCTCCATCAAACATCGACATACAGATCTGTCTGCTCGAGCGTTCCCCTCGGTTACCAAAACTGATCAATCTGAGGGAAATCGATAAAGACATGCAGACTCTTTATATAAACTCCAGTGTGGCAGAGTTTGAGTTTAAAGCCAGTAAAGGGAGCGACGCCAGAGTAGAGGGACTGATCAGATATCATCCATTCCTGTATGACAAAGAAACCTACCCAGAGGACCCATACAACTCAACACCagtTGCAGAAAATGACGACGAtgactgttttatttttcaagCTGAGGGACGAGGAAAAAGACCCATTTTTGAGTGCTTCTGGAATGGACGATTAATTCCTTATTCTTCTGTCAATGAgTTTGAGTGGTGTGCAAAACCCAAGAAAATGTGTACAGTGCCTTTAGAATGCTACAACAGAATCTCAGGTGTTCTCTTCGCTAACGACTGTTTTCAAGTCAGCACCAATAAACTCACATTTATGGATCTGGAACTGCAGCTACGAGACAAAGAAACCATCTTTACCAGAGTCCTTAACAGCCAGgagCAGAGAGTGAAGATCAGTCGAGAATTCACGATTTGGTTAAAAGAATGTCATGAACGATTTGacaaacagGTGAAGTTCATTGGTTACCATGGTACAACAACTCGCACAGATGTCTCATCTAAGCGGCAGCAGTCGCCATGGGCTCGGTTCAAAGGCATCCATTGGGACGGCAAAGTCTACAAGGCTGGACAGCAAGTGAAATCAGTGAAAACTCAACCTATTCTGTTTGGCTCCATAGTTCAGTTTCTGCTCTATGGAGACCATGAGGGGGACGTCTACGCCACTGGGGGACATGTTCAGATTGCACTGGAACCGCAGGAACTGTATAATGAGGTTCGAATTATTCCAATATCCAAGATCGACAGACAGGCAACAGATTCTGCCATCAAGAAAAGCATTGCTGAAGAACTGGCCAAGCTTCCTGATCAGTTGAAGGTTTCATGGCCAGAAGGAAACCCGTGGCCTGACAAGGCTGTTCGTCCAGCTGGCACTCCTTTAgGTCCAATCCAAGTGCATATTCTGAATAAGAAAGGAGAGACGATGTCCCGGCTGCCGGTCTCCAACATCAACGCCAAAAAACTCCTGATGGAGCTGAAAGTCATCTGGCACTctcCTAAAGGGGATGTCCAGACAAACTCTCACATTTGCATGCACTCCACCAAGTGGGAGTTCTGGTTCAAAGTAATGGaaaACTTGAATAAATTGGGAAAGTACACACTTTGCTTGCAGACTTTGCTGAGTGATAGTGAGTCAGCTAGTGAGTGGGCTGGGAAACGTCTGCCTCAGTATGTGCTTCACTTCACTATTAAAGAAAGCAGTGCAGCATGCTTTGTATTGCGCTCAGTTCCCACGTCAGTGCAGGTGGGCGTGCCCTTCTCTCTGAACCTGGAATTTAAGGATGAATTTGATCATGTGACTCAGCCCCCATCTGACATCAAACCCCAGCTAGAGTGCAGTTCACTGCAGCTAAATTACGAGCAGACAGCTTTGAATGGAACTACATTTACCGTACAAGACCTGAGAGCCAAGGGGAAAGTAACAAACCAGCTGGAGAAGGTTCACACGGTGAAAGTCATCGTCCCAGGCCTCAAACAGGACTTCCAGTCTTTCCAGTTTAGTGTTCGTCCAGGTCCTCCACAACAACTGGTGGTTTTTCCTGAGAACGACATCTCTATAGAAAACGGATCACCAGCAGGATTTAAAGTGGAGGTTCACGATGAGTTTCAGAACATCACAACACATTCCAAACTCATCGTCCGCTGCCAGTTATTAGGAGCCCCTGATTTACCTGTGGATACTGTTGACTGCAGTAATACCGGCACAGGGGTGCTGCTCGCAAAACCAGTTCAGCTGAAGAATGTCACCACTGAGCAAGTCCTCACTGCCAAGTTTGGCATTCCTAACCAGAAGGGAATATCTTGTGTGGAGCGGAGTCTGCGCGTGCTGCCCAGCACACGTGTCTTCCGTGTGGAGATTTACAGGCAGGATTCGGATGATGTCATGTTGATTCAGAATCTGGAACGAATCAACTGGACAGCAGGAGACACACTCGGGAGTCTGCGCTTCAGACTGTATGATGAAGGAGGCAGGCTGGTGCCTTTAACACACAAACTTGCACATAATGTAAAGGTGAACTGGACTGCAGGCGTAAGGACAGCAGAACTGGCTAAGGGAAGACTTCCAAATGTTTCTGTTCCAACGAAAGTACAGAGAGAGCACTTCTATCAGGTGTCTTTTACGGATCAGCAGTCAGTTGAGACGTCCTTTTTCATAATCCCACGTCCAGATGAACCTGACAAACTGAGGGTCACTCTCAGAGAGAACACTGTGAAAATGGGAGAAACTCTATCAGAAAATATCTCCGTTGAGGTGGTTGATCAGTATGGTAATAAGACAGACACTCTGAATGCTGAGAACATCAAGACAGTCAGTGTTCACGCAGATGACCTGGATGTGTCCACCCTCAGTGTCGATTGGCAGgaAAGCTCAGGCACTGTGTTGGTGAGTGGTGTGCGCTTCACTGGAGGCTCACCGGGTTCCAGGGAGTTGTGCTTCAAGTACCAAGAATTTGAGGAGTTTGCCAGAGTAAAGGTCACTGCTGGACCCCCTGCTAAAATCACGCTGGTGGAAGCTCCAGAAATGCCGTTACATGTGTTAAACGGACGAGGTCTGGACACTCCGTTCCTGCTACAGTTATGTGACAAGTGGGAAAACCCTGTTCCAGATCAGCGAGTTGTCATAGCGATCAAAACGCTTTCAACACAGCTCAAGGTTAAATCATCAGTGATGTCCCGGCCGGTGGATCCAGACGGAAAGGCTTGCTTCAAATTGGAGATGGTGACGGCACCAAAAGGAGAGCATGAGCTGGAGTTCCGCGGATCCTTCAGTAGAAACAGTATTCCTGGTCCGGTGGTGAAGCTGAACGTGATGCCTGATCCCAACAACCCCGTCAAACTTACTGTGGAATATGATAATGAGGCCATCTTAATAGCAGGAGACTTTTTGCCAGAGTTTAAAGTGATggtggtctctgaagaaggTGGTCCGGTGAAGAATGTGAATCCAGCCAGTCTGACCATGCTGCTGTGGCAGGGTTTAGCCGCAGGAACCCGCCCTCCTCCTGAGGCAACAAATTTTAAGTGCAGTCAACAGGATTCGGACATCTTTTACTTCAGagacAAGGAGATTCCAGAACATGTAGGAAAATACATTGTGCAGTTTGTCTTCGTTGGAGAAAAAGGCAAGTTCCTCTGGAGCAGTCAGATTGCTCTGAAGGTAGTTCATGATAAGCCAGTGAGGCTTGTTCCAGAGTCTTCTCCTGCAACCCCCGTGGTCTCTAACAGCGATGCTGGTAATCGCACACTTCTGGACAGTTTATGTCTGAAGATTATGGACAAGTACAACAACCCTGCTGGTACGGGGAAAAACGGGCAGGTGGTTGTAACAGTGATCGGTGCTGCAGGAAGTAAAGCAAAAGATCTTCCTCTGTTTGAGAAGAAGGCCAAAAGTGTATCCTACAAACTCACAGAAGGAGAAGCCACCATCACTggcttGGCACTGATGGAGAACAGTCCTGGATGTGATGGAGCTGAGTACACACTGCAGTTCCAGCCGGTGATCGAGGGACCTGGACCCAGTCCTACCATCACTCCGTTTACATTACCTTTCAGGTTCTACAATGATGCAGAGAACCAGAAAGTCATGGCTGAGATGAGTAAAAAGAAAGATCAGCTCTCTCACTCTATTGTTCTGTACAAAGGCATATTAGACACCCACACGCAGCTGGCTTCTGAACTAGAAAGTCAGGTGCGCGATGCATCAAGCAGAGAGACTCAGTGCAAATCAGAACTGAGCAAAAGTGGTATAGATGTTTCCAAATTGCGAACTGTGTCAGCAGTTGACAGTTTGATTGCTGAAAAGAAAGCAGATATGGAGAAGATACAGAATGCACCTCGCCGAAAATGCACCATGCCTGATTCATTTAAAGGCAGTCCAGATGTGCTGggaaagATAGCACACCTGGCACAGGTGGAGGATGATGATGCAGCAAAGGTCATCTCCTGGCATATTCTTGGTGACATGGACTGTGTGGTTACAGTAACAACAGCTGCAGCAAAGAAAATCTATGATGACACGCAAGGACGACAACAAGTCATGCCCTTAGAGACAGTTTTCTGGAGACCAAATACCAGGCCTCTGCCTCACATCAGGAATGAAGAACCTTTATTTAAGCCGTTAGGAAACCCTGTGTTTGTCCGAGATCTGCTCATTTTTCCTGAGCATGAAGAGAACTGCAACAAGGTTTTTTCAACTGTTGTTGGAGACACAATATTGGTGGATGATCTGGACTCTGCTAATCATTACCGTAAGGGGGTGGTGCAGAATAAGGTGCAGTGTCCCACGCTGCTGACGCGTCAGGGTGAGCGGATTCGTGGTAATGGAAAGTTTGGGGGTCTGCAGAATAAAGCTCCTCCAATAGAGAAGTTGAGAGGACAGGTGTTTGGAGCACCTCTGCCTGAAGAATATCACACCATATCCAAACAGATAGagCTGCTGCAGCAGTACTCTGTGGCGGTACAGAAAGCGTCAGAGGTCCGAGCTGATTTTGACGGTCACATGCTTTACCTGAAGAGTCCGGAGATGAAGCAGAAACAGCGGGAGCTTCAGGATCAGGAGAAGACTCTAAAGGACATCGAGAAGAAActagCCAGCACTCCTGTACGCAGTTCTCCTGTTTCAGTAGCCAAACGAAACCTCCTAGAGGAGCCTGATGAGACCCTTCCTGCTAAAAGGATTCGCCGTAAAAAAAGAATCCTGGaTTCTTAGACAATCGTCTCAGACCAGCCTGCAAAATCATCTCTATTAAGTGTTTATCTGAACAGCTGCAAAAAAACTTCTTGTTTGGATTTTGGAACAAAAGACTTTTTTTCTTGTATGTTAAAAAGGGATCACCAATTTTTTAAAAGACTGTGAGGATTTTCTGTCCCACTAATACTACATACAGTAGTTGCTTAATTtctagcttttttattttattttttattattgcttgcCTTTTATAAAGATAACTATTATCACAGATTTCTAACgtaaaacattttctgtttgTATTTAATAGAAAAGGCAGCTCAAAAGTTATGGACTATGTCCAGAATGTGATTTCTATGtttctgttaaaaaatataatgtgtttgttttctatAATTGTTATCTCACagcactgttttttattttttaaatatatatttgttatctTACAGCACTGTCTTtttattcttcaaatatataaTTGTTATTTTACAGCACTCTCTTTTTATCATTTGAATATATAATTGTTATTTTGCAGCTTTTTTATCTCTGAATAAGATTTTTCTTATATCTgc

Function

symbol description
smchd1 Predicted to enable ATP binding activity. Acts upstream of or within with a positive effect on definitive hemopoiesis. Acts upstream of or within embryonic cranial skeleton morphogenesis. Predicted to be located in chromosome. Is expressed in blood cell; caudal hematopoietic tissue; intermediate cell mass of mesoderm; and posterior lateral mesoderm. Used to study choanal atresia. Human ortholog(s) of this gene implicated in facioscapulohumeral muscular dystrophy 2. Orthologous to human SMCHD1 (structural maintenance of chromosomes flexible hinge domain containing 1).

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022677622.1 True 7108 mRNA 0.46 50 23190464 23250746
XM_022677623.1 False 7005 mRNA 0.46 49 23190468 23250746

Neighbor

gene id symbol gene type direction distance location
trnaa-cgc_2 NA coding upstream 125106 23065287 ~ 23065358 (+)
trnat-cgu NA coding upstream 125365 23065028 ~ 23065099 (+)
adcyap1 adcyap1 coding upstream 168052 23016781 ~ 23022412 (+)
LOC103031382 NA coding upstream 186470 22991462 ~ 23003994 (+)
tyms tyms coding upstream 251205 22934665 ~ 22939259 (+)
emilin2 NA coding downstream 4931 23255677 ~ 23290625 (+)
LOC103023765 NA coding downstream 184848 23435594 ~ 23442090 (+)
LOC103024399 pde5a,pde5ab coding downstream 322057 23572803 ~ 23664047 (+)
LOC103024717 LOC108436153,LOC108267195,LOC107730122,LOC559800,LOC107698664,LOC107559837 coding downstream 459762 23710508 ~ 23734928 (+)
LOC103035300 cacnb2,LOC102289395 coding downstream 529506 23780252 ~ 23905504 (+)
G143694 NA non-coding upstream 1228 23187028 ~ 23189236 (+)
LOC111194181 NA non-coding upstream 5200 23181717 ~ 23185264 (+)
G143683 NA non-coding upstream 10780 23146051 ~ 23179684 (+)
LOC111194176 NA non-coding upstream 15664 23172948 ~ 23174800 (+)
G143691 NA non-coding upstream 16676 23170596 ~ 23173788 (+)
G143684 NA non-coding downstream 40566 23291312 ~ 23291924 (+)
G143698 NA non-coding downstream 42246 23292992 ~ 23293214 (+)
G143699 NA non-coding downstream 43320 23294066 ~ 23294388 (+)
G143701 NA non-coding downstream 44727 23295473 ~ 23295859 (+)
G143702 NA non-coding downstream 47064 23297810 ~ 23298390 (+)
G143324 NA other upstream 580017 22535685 ~ 22610447 (+)
G143182 mlrn,LOC103039566,LOC106517213,LOC104925296,LOC105008240,LOC106578694 other upstream 1282150 21811291 ~ 21908314 (+)
G143122 LOC108436138 other upstream 1543759 21645905 ~ 21646705 (+)
LOC103047556 LOC108436107,LOC108267807 other upstream 1578782 21598682 ~ 21611682 (+)
plag1 plag1,LOC107730125,LOC107698667,LOC107660303,LOC107705642,LOC107570428 other upstream 1610740 21569082 ~ 21579724 (+)
LOC111194251 NA other downstream 134422 23385168 ~ 23395240 (+)
LOC111194174 NA other downstream 152942 23403688 ~ 23406894 (+)
G143836 NA other downstream 577202 23827948 ~ 23916082 (+)
ppp3ca ppp3ca,LOC103369319 other downstream 1185633 24436379 ~ 24602402 (+)
G144017 NA other downstream 1456337 24707083 ~ 24711533 (+)

Expression


Co-expression Network