LOC103030163


Basic Information

Item Value
gene id LOC103030163
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 11433551 ~ 11435570 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022677707.1
ATGAATGCAGCTGTGTTTGTAGTTCTCTTCTCACTGATCACAGTGGGAACTCTGGGACAGACTGTGGAGCAAACTCAGCTTTCCTGGACAAAACAGGTGGGCAAAAGAGTTTCTATCAGCTGTAAAGTGACTGAACTTCAGAGCTTCAACTATGTTCACTGGTACCAGCAGAAAGACGGTGAAGCTCTCACAAGGATGCTGTATGTTAATGCTGCAGGAACGAGTCCTGTTTACAACCCTGACCATCCTGAAGCAGAACACTTCTCTGTGAGGCTCGAGGGAGTTACGTATGTTCTGAAAGTGAGCGCAGTGCAGATGATCCACACAGGTGTTTATTACTGTGCCTGCTGGGATAGAAGCAGCCACAGATGGTTCATTTATAGTGTAATATTGATTACAGTGGGAACGTTGGGAGTGGAAGTGGAGCAGAATGAACTCTCCTGGACAAAATTACTGAACAAAAGAGTTGAGATCCAGTGTAAAGTGACGGGGCTACAGACTAGCTATGTCCACTGGTACCATCAGAAAGACGGTGAAGGACTCACGCGGATACAGTATGTTAATGAAGCCGGCAATAACTTTGTTCAGAACTCTGAATTCTCTGTGAAGAAAAAAGGTGAAAATTATGATCTGAAGTTGAATGAAGTGAAGAAGAGCCACGAAGGAGTTTATTACTGTGCCTGCTGGGATAGCAGTAGCCACAGTGACTCAAACTGCTCACATCCTCTACAATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022677707.1 True 735 mRNA 0.45 3 11433551 11435570

Neighbor

gene id symbol gene type direction distance location
LOC111194235 NA coding upstream 4180 11428868 ~ 11429371 (+)
LOC111194306 NA coding upstream 6724 11417891 ~ 11426827 (+)
LOC103029835 NA coding upstream 27220 11405424 ~ 11406331 (+)
LOC111194198 NA coding upstream 32181 11400637 ~ 11401370 (+)
LOC111194199 NA coding upstream 34548 11398281 ~ 11399003 (+)
LOC103030487 NA coding downstream 2851 11438421 ~ 11438953 (+)
LOC111194236 NA coding downstream 14804 11450374 ~ 11450943 (+)
LOC111194307 NA coding downstream 16365 11451935 ~ 11452606 (+)
LOC103022687 NA coding downstream 46179 11481749 ~ 11493706 (+)
nol7 NA coding downstream 85870 11521440 ~ 11530907 (+)
G140563 NA non-coding upstream 304642 11127288 ~ 11128909 (+)
G140556 NA non-coding upstream 429025 11003817 ~ 11004526 (+)
G140550 NA non-coding upstream 454461 10978574 ~ 10979090 (+)
G140543 NA non-coding upstream 484066 10949255 ~ 10949485 (+)
G140516 NA non-coding upstream 675081 10758255 ~ 10758470 (+)
G140670 NA non-coding downstream 8271 11443841 ~ 11444206 (+)
G140644 NA non-coding downstream 16449 11452019 ~ 11455807 (+)
G140671 NA non-coding downstream 19000 11454570 ~ 11454829 (+)
G140676 epdr1,LOC108437243,LOC107664036,LOC107558964,LOC107713986,LOC108267170 non-coding downstream 65486 11501056 ~ 11520012 (+)
G140637 NA non-coding downstream 71094 11506664 ~ 11513421 (+)
G140659 NA other upstream 50046 11380098 ~ 11383505 (+)
G140520 NA other upstream 634660 10798545 ~ 10798891 (+)
sppl2b sppl2b,sppl2,LOC107738168,LOC107591351,LOC107668984 other upstream 989011 10427266 ~ 10444540 (+)
G140402 NA other upstream 1033575 10395520 ~ 10399976 (+)
G140336 prkci,LOC107659412,LOC107706387,LOC102783124 other upstream 1088080 10311100 ~ 10345471 (+)
LOC111194237 NA other downstream 19915 11455485 ~ 11478740 (+)
G140931 NA other downstream 802418 12237988 ~ 12240625 (+)
G140930 NA other downstream 943426 12378996 ~ 12381554 (+)
G141086 NA other downstream 1305903 12741473 ~ 12743453 (+)
LOC103029537 adcyap1b,LOC103029537,LOC108437223,LOC107713980 other downstream 1407228 12842798 ~ 12860327 (+)

Expression


Co-expression Network