LOC103032062


Basic Information

Item Value
gene id LOC103032062
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 11974748 ~ 12050443 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022677710.1
TTCTTCTGGTTCATAAAATCACTTAGTAGAGTGGGCTTTAGCTGATTCTGTTCACTACAGGATGGACAGACTGCTTGTCCTGCTGCTTGCAGCTGCTTCCTGTACTGGTGGCCAGTTCCACTCTCTATATAAGGACCATGTGAATGCAAATGAAGACAGTGACACAGATGGGTTTGATGGTTCGTGTGACTTTGAGAAGGATGCATGTCAGTGGAAGGATAACAGTAAGGATGCATTTCGCTGGAGGCTGGAGAAGGCCAATATCAGCAGAATTCCGGGTGTGGATCATACCACTGGATCACCATGGGGTCAGATCATGCATGTAAACGGTTCAAGTTCTAATATTTTCTCAGAGGCCATTTTGGAGCACACCTTCAATCAGTCCACTGCTCTCGGGTGTCAGATAAGCTTTTGGTATCATCTTCATGATCCCGTTGGAATATCGTCTCACTTTGTTTTGAGCCTGGTCAGTGAAGGGTCTTCTGCGGTCCTGTGGAATATAAAGAAAGGGCAGACTGATGGTTGGGAAAATGCATCAGCGAGAGTTGGGAATCGTCCTAAAGCATTTAAGATGGTGTTTTCTGTAGATCCCACGTATATCGGAGAACAGGACGTGATGCTGGACGACATTAAGTTAACAGGCTGTGCAGAAGGGGATGTTCCTGCAGGCTCAGAGCTGCTCAGCTGTGACTTTGAGAAGGACGTGTGCGGTTGGTACCCAGACTACTCCACCAGCCTCACCTGGCAGAGGGCTAATGGTCGAAAACCCTCATATGACAATCAGGGACCGGGATATGACCACACAACTGGTTCTGGTTATTACATGTATATTGCCCCAACACGCAGCTCCAACCCCTCACAGACAGCCAGGATGGTCAGTTATCCTCAGCAAGGCAAATGCATCAGCTTCTGGTATCATATTTATGGAGGCAGCATCGGCTCTCTTAGATTCATCTCCAAGAACAGTGATGGGGCTGAGACAGTGATGTGGATGAGGACTGGGAATCAGGGAAACAAATGGCGCTTCGCTGAGCTCAGCTTTGCCCACAATGACAGCCCAGTACAGtttatttTAGAAGGTGTCTTAGGAGGCACAGATGGCAGCATTGCTATAGACGACGTTCAGGTGTCGAGCAGTGTGAACGGTTTGTGTCCAGCTGAAATAGAGTGCACGTTTGAGAGCGGCCTGTGTGGCCTGCAGACTGAACCTGCAGCCCAGTTTCCCTGGATCAGAACCACCGGAGAACAGACTTCAGGCACCACCAGCCCAAGCGCAGATCATACTCTGGGCACTGATCAAGGCTACTACCTGAGCGCTCAGCTATGGAAGTACCCTCCTGGTAGCCGAGGCAGCGTGATAACTCAGGATAATGAGCCGACTGCAGAGAGCGGGGTGTGCTGGATGTTCTGGTATCACATGGCTGGGAAGGACGGTGGAACTCTCAGTGTGTATCTGCAGCAGTCAAACAACAGCAGCTCGAAGGTTCCTCTCTGGAGTCGCAGCATAGAGCAAGGAGAGCGTTGGAGACACAGCAGAGCCACTGCACTCAGCCCTCACTACTCTTACCAGATTGTATTTGAAGCAGTGGTTGGAGAGGGTCAGGTTAAGGACATCGCTATAGATGATCTGTCTGTTCTAAATGGGCCCTGTTCTCCTAATGGGCTGTGTGACTTTGAGATGGACGAGTGCGGCTGGGTGAACAGTGCACTCAGTGATCACAGTGTGCCCTGGAGCTGGACTTCAGGAGCTAGTGGCTCCGGGTTCTCACCTGAGGTCGACCACACCACCAATTCTGCCCTTGGACACTACATGGCCTTTGAttcaaaatacgacagaaatgAGCAGGTTGCTCACCTTCAGAGTGAACTAATGCCGCCAGTGGATCATGCCTGCCTGGAGTTCTGGTACTACATGAATATGTGGGGCACTGTGGATAAGCTAACGCTAGATATATATGTGAATGAGTCTGGCACCCTTCACTTCCTGTGGAATAAGACTGGTGCTCAGGGTAAAGTGTGGAACAAGGTCACTCTGGATTACCGAGCATCTGAAAATTACCAGATTGTGTTTGAGGCCAGGCGGCCACCATACGATGAGGGAGTCATTGCCTTGGATGATATCTACATCAAAGAGAACACAGGCTGCTCTGACCTGATCCCCACTACACCAGCCCCCACCACGGAGCCCACCACCCCACCTCCATCCTCCATGGACTGCAGCTTTGAGGAAGGACTGTGTGACTGGATTCAGGAAGCTGAGCATGGGATCACTTGGAACCGTCAACAAGGTCTGCAGATGGACACAACCACCAAAGGACCCTTGTATGACCACACCACAAAAAACAGCCACGGGTTCTATCTTCTTCTTAACATGTCCGGAGATAAAGATGAGCAGTCAGCGGTCATTTCTGCCCCTGTGACTGTAGAGACCCCCAGTGTCTGTGTGGAATTCTGGTATTACATGCTAGGAACACGGGTGGAAAGCTTGGACCTGCTGGTTCAGACGaaaaaagcaGAAACGGTTGTTGTATGGACTAGAAAAGGAACAGAAGCTGCTGAGTGGCTGAATGGCCAGGTCACACTCAGCATGAATGACATACAGAGAgtaaaactCTCTGGTAGCAGAAATGCTAACAGCAGCGGATTCATAGCTATAGATGATGTGAGAGTGAGCCCAGGTGCCTGTAAAGATCACAattcATGTGGTTTTGAAGACGCTTCACTGTGTGGGTTTGAGCATGATGTGACTGATAGCACTCACTGGAGCCGTGTGGATGGCAGCACTGGACATATTGATCACACCTACAGAAGTCAACTGGGTCATTCAATGGCTGTTTTGGGAAAGGACCTTCTAAATTTAGCATCCACACATCTGCTAACACCAGAATACAGCAAAACTACAGAGACCTGTGTGCGTTTCTGGTACTGGCTGTCTGCTAGCCCTGCTGATTCTCTTGCTGTGCATGTTTATCTGAATGGAGAGCTTGGCCATGCACTGTGGTCTCTCTCTGGGGTGCCCTCTACAGGCTGGGAGGTGGCGGAGGTCACTGTGTCCTCTCCATCCAAATTCAGGGTGGCGTTTAAGGCAGAGATAAGCCCCGCCCAAAAGACCTTCATTCTCCTGGATGATGTGTCGGTGAGAGACGGTGCCTGCTGTCCCAGAGGAAGTTGTGATTTCGAGTCAGGGTCATGTACATGGATGAATGCTGCCAACAGAGACTCAGATGGTCATGACTGGGTCCCTGCAGATGGACACTCTCTCGGCCCTCCAATTGATCAAACGACGCATACAGCATATGGAAGGTTTATGCTGAGCCCATCTCAGGCAGAACACAGCAGCAAAGCGGTGCTCATCTCTGAGCGAATCCTACAGAACTCCAACTCCTGCTTCACTTTCTGGTACCATATAAACAACAGTGACTCAGGGATGTTGCGAGTGTTTCTAGAtgcagaaaaaggagaagagctGATGTTTGAAACAAGTGCTGCTGGACACAGCTGGAGAAATTTCTCTACAACAGTGTCTGAGACTAACCCTTTTCAGATTCGTCTGGAGGCAGATTCTGGAAATGGTGGATTTATGGCCGTGGATGACGTAACAATTATGAAAGGCCGGTGTGAAGATGAGGCTGTAGAGAGTGGGCTGTTTGTTGGCTGCCAGTTTGAGACGGACAGCTGTGGATGGACAGATGTGAGTGTGGGGCAGTTTGTCTGGCAGCGAGATCACAATGGAACAACCACTGCCAACACTGGCCCGTCAGTGGACCATACTACTGGAACAGAGCtggGCTGGTATATGGCAGTAGAAGCCAGTCATGGAGATCAGAACAGCTACGCTGCACTGCAGAGTCCAGCCATGAAGCAAGCCGGCGCTGAGTGTGTGCTTGAGTTCTACTACCACATGTACGGAGAGGGTATTGGGGAGCTGAAAGTGTTTCTTCAAGAAGGCCCAAGACGAACTATTCTGTGGTGGAAATCTGGTGATCATGGAGACGAGTGGCTTCGGGCAGAGGTGGCAGTAGGTCGCACTCATCAGGTTTTCACCATCCTCTTCGAGGCCACCAGGACCTTTAGTGAGCTCGGGGACATCGCCATAGATGACCTTGCCTTCATCAACTGTTCCCTGCCAGAGCCTCAGGACTCATGTCCTACTGGTACATTCACATGCTCTAACCGCGTGTGTGTGGAGGCAAGCAGAGTGTGTGACTTTAGTGATGACTGTGGAGATGGAAGTGATGAAGCACATTGTGATGAGCTGGGTTATAAACAGCGCTGCAGTTTTGAGCAAGGCATGTGCTCATGGCAGAGTAATGAAGGATGGGATGGGTGGAGCCTGCAGAGTGGAGAGAGGGCGTGGCCGGTGCATGGACCGCCTAGAGACCACACCCGTAACACAGCGGCAGgTCATTTCATTGTCCCTGTCCATCATCATTCTGCGAGCCAGACAGCAGAGATCATGTCCAGCACTCTCCTGCCCAGCTCTGAGTGCACTGTGATCTTCTACTACTATGCCCACGGTAACAACTCCATGGCTGGACTGACCGCACAGCTGCGGAGGCTCCGGGGTGGGGAAGATGACATTATTCTCTGGGGCCAGACTGTGACTCATGGATTCCACTGGCAGAGAGTTGAGGTCACCTTCTCCTCCTCAGTGAAGGCCAAGATTGTGTTCCGGTTTGTGGGGAGCAGTGAGAACCGTGAAGAATTCATCACTGTGGATGATGTGTCCTTCTCACCGAGCTGTGTTCATGACCCTGACAACAGCCAACTGCCAGAAACTCCTCCTACTCTTTCTCCCTCAACACCCACTGCACCATTAACTACTCCCACACCTACTGACCATCCCTGCAAGGAGAATGAATTTTACTGCTGGAGGTCAAGCGGGATGAAATGCATCGCTTCCACTGCTCAGTGTGACTACAGCATAGACTGCCCTCTAGGGGAAGATGAGGAAACCTGTGGACCCTGCACATTTGAGAATGGATTGTGTGACTGGAGTGATATAAGCCAGAGTGTCAACAAGTGGCTGAGAGTGAAAGCTGGTGACAACACAGATCCCCCAGCTGACCACACCACAGGAACAGGACACTACGTGCATGTGAATTTCAGTCCTGCGTCATCTGGAAGTGAAGCACAGTTTCAGAGCCCATCACTGCCATCCAGCTCCCCCTACTGCCAGATACTGTTTTATTTCCACCTGGGAAAAGGAGGGAATGTGGGAGATCTGAGTGTTTTCCTGCAGAACGATGAGGGAAAGAGAACGCAACTCTGGACACGCAACCACAGCACTGCAACACCCTGGAGCCTGGAGTACCTGGCAGTTGGGAAGCAACAGAAACCTTACAAGGTTATCTTCAGTAGTCAGACCACTTCACTGCAGAGTGCTGCTAAGCCTGAGTACAGTGCTACTGCTCTGGACGACATCTCTTTCTTGAACTGTGAGACCTCATACCAGCCACCAGCTCTGTCAGCTATTGGCTGCTCCTTTGAGAAAGACCTGTGTGGGTGGGTGCAGGGAAGTGCTGAGGACTTACACTGGCTGAGGAAGAGTGGACCTACTGAAACAGTGAACACTGGACCTGCAGGAGATCACACCAGTAGCAAAGGATATTATGTATATGTTGAAAGCTCAAGTCCCAACAGAAGAGGACAGGTAGCTCAGCTTAAGTCTCCTCTGCTTTCTCCTGCTGGGGAAAAGGGATACTGTCTTCAGTTGTGGTACCACATGTTTGGAGCAACAGTCGGATCACTTAAGTTGTTTCTACAGAATGTTAGCTCCAGGAAGACAACACTGATGTGGCAGAGGACAGGGTCTCAGGAAAACAAATGGCAGCTGGTCCAGAGTCATGTAACCCTACAAGAAGTTCATCAAATACTAATAGATGCTTCAATAGGTGGAGAGGCTGGGGATATCGCTATAGATGATATATCACTAACTGAAGGAGCTTGTGTCCCAACAGACGGTCTGTGTAACTTTGAGGAGGGCAGCTGTGGTTGGACGCAGCAGGCTGATGATGATCTTGACTGGATTAGAGGATCAGGGGTTGATCCAGTACTAAACACCAATCCGAGCGTTGATCATACAACCCACACCGACAGTGGACATTACTACTACATGGGCTCAGACTCTTCTCATGTGGGTGAACACACTGCTAGGATGAGCTCCCCTCTTTTTACTGCAGGAGATAAGCAGTGTCTTCAGGTTTGGTATTATATGAGTGGGCTGGATGGTGGAACATTAAACGTGTATCAGGAGCTCTCAGGTGGGGCTCAGGCTCTGCTGCTGAGCCACTCTGGAGAACAAGGCAAGCTGTGGAGGTTTTCCCAAGCACCTCTGCCCCACACATCACCAGAATACAGAattGTGGTGGAAGGTGTAAAGCAACAGAGTGACCAGGGTGTCATGGCTGTGGATGACATAATGTTATCCACATACCCATGCACTGGCCCAGGCTTCTGTGACTTTGAGGTGAACATGTGCGGATGGAGAAACGTACTGGATGAGGATGAtactgattggctgagagatcAGGGAAACACTCAAGCTCCGAGTACAGGTCCAAGCATAGATCATACCACCAACTCTTCTGTAGGTTACTACCTGTACGTGGATATTACGGTGGGGAAACAAGGATCTAGAGCTTTGCTGCTGAGCGAGATTTTCCCTGCAGACAGCACAGAAAGCACAGGACAGTGTTTCACATTCTGGTACCACATACATGGCTACAAGATAGGAACCCTCAACTtatacattaataacagGACCACACATAGCAGTGGAAACAAGCTTGGGGATCTAAAGTGGACGGAGTCAGGAGATCAGGGGGATGTATGGTGGAGGAGCAGAGTCGACATCCATTACACTGAGCCATTCTGGTTTGTGTTCCAGTATCAGAAGGGCGAGGGGTCCGCTGGGAGTGTGGCTCTGGATGACCTTCACATTACTCCTGGGCCATGTGACCCTGTTATAGAACCCCCGACTACAGCAGCTCCACTTGATGGTAGGACATTAAGTCagttttaa

Function

GO:

id name namespace
GO:0017040 N-acylsphingosine amidohydrolase activity molecular_function

KEGG:

id description
ko04614 Renin-angiotensin system

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022677710.1 True 7024 mRNA 0.50 48 11974748 12050443

Neighbor

gene id symbol gene type direction distance location
LOC103031742 NA coding downstream 6347 11945426 ~ 11968401 (-)
LOC103027519 NA coding downstream 142484 11819859 ~ 11832264 (-)
trnad-guc_16 NA coding downstream 219149 11755528 ~ 11755599 (-)
rnf182 rnf182 coding downstream 401535 11568053 ~ 11573213 (-)
ranbp9 ranbp9,LOC107556766,LOC107664064 coding downstream 406827 11532828 ~ 11567921 (-)
LOC103032996 NA coding upstream 6392 12056835 ~ 12121276 (-)
LOC103028177 LOC108437218 coding upstream 533434 12583877 ~ 12589743 (-)
stam stam,LOC107664071 coding upstream 546377 12596820 ~ 12612107 (-)
LOC103028809 colec12,LOC103028809,LOC108437226,LOC108267818,LOC107686068 coding upstream 567708 12618151 ~ 12703278 (-)
LOC103029125 yes1,LOC108437224,LOC107713975,LOC107584194,LOC107686048 coding upstream 689941 12740384 ~ 12822960 (-)
LOC111194201 NA non-coding downstream 104 11972057 ~ 11974644 (-)
G140887 NA non-coding downstream 12400 11957505 ~ 11962348 (-)
G140883 NA non-coding downstream 33082 11935869 ~ 11941666 (-)
G140882 NA non-coding downstream 43912 11927862 ~ 11930836 (-)
G140815 NA non-coding downstream 131530 11837177 ~ 11843218 (-)
G140897 NA non-coding upstream 3418 12053861 ~ 12054156 (-)
G141000 NA non-coding upstream 216724 12267167 ~ 12267708 (-)
G141013 NA non-coding upstream 283012 12333455 ~ 12335228 (-)
G141024 NA non-coding upstream 328492 12378935 ~ 12381531 (-)
G141136 NA non-coding upstream 686951 12737394 ~ 12818134 (-)
G140772 fam134b other downstream 364219 11606235 ~ 11610529 (-)
G140472 slc4a2,LOC108413474,LOC107718031 other downstream 1459941 10511089 ~ 10514807 (-)
prkci prkci,LOC107668962,LOC107659412,LOC107706387,LOC107738175,LOC107591345 other downstream 1629250 10311097 ~ 10345498 (-)
G140342 NA other downstream 1871291 10035403 ~ 10103457 (-)
LOC103044908 LOC103045223,LOC108413497,LOC105899383 other downstream 2260711 9697155 ~ 9714037 (-)
G140975 NA other upstream 123252 12173695 ~ 12174994 (-)
G141020 NA other upstream 298116 12348559 ~ 12415155 (-)
LOC103027860 cacnb2b,LOC108437228,LOC107664070,LOC107713974,LOC107751551,LOC107585874 other upstream 422361 12472804 ~ 12572147 (-)
G141220 NA other upstream 1265448 13315891 ~ 13316365 (-)
G141255 LOC108413406 other upstream 1386188 13436631 ~ 13438896 (-)

Expression


Co-expression Network