LOC103041924


Basic Information

Item Value
gene id LOC103041924
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 14488431 ~ 14500190 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022677713.1
ATGACAAATGGCAGAAACACCATGAAGCCACGCGGCAACGACCGGCGCCCGAAAACGTATGTCAgcgtctgcaagcaggggagaacagAAATATCTAAACCTACATTGAGGGTGGATCCTCACACCACTGTCTACACTGGAGAAACACTTACTCTGACCTGTGATCTGAAGAGCTCTCTCACTGGATGGAAGTTTATCTGGTTCAGAATCTCTCAGCAGTTACAACCTCCTGAATATAAAAACACCAACACAGTCAATATATCAGCGTCTGATACAGGAACAGCAGAGTATCAGTGTTCAGCACTCAGAAGAGAAAACATCACCACAAACCACAGTGATCCAGTCAATATTACAGTACAAGCTCtgcctaaacctaaactcacaTCGAGTCTTACAGGATCTGCACTGAGAGGAAGTTCAGTGACTCTGGAGTGCAAACTGGATCAGACTACTGGATGGAAGTTTTACTggtataaaaacaaacagaaagatTTCAGCACTGAAACACAGTCCTACACCATTAGATCAGTAAGGGACTCTGATGGAGGTCAGTACTGGTGCAGAGCTGAAAAAGGAAGCATAACCACACCCTACAGTAATGCATTCTGGGTACAGGTTACCGAAAGTCCTAAAGCTGTGGTGTCTGTAAATCCTGATAAAGATGTGTATAGAGGAGAGACTGTCACTCTGAGATGTGATATACAGTCAGGAGGAGACACTGAATGGAAATACAGCTGGTTTAAAGATGATCAAGAATTTCACTTACACAGCACATCTCAGGAGTTCAGATTTAACCCTGTTAGAGAGCATGACAGTGGTAAATTCACCTGCAGAGGAGAAAGAAAACGTGACTCAGTGTTCTCAGAGATGAGTGATGCTCTTACACTGACTGTGTTTGGTGAAGCTCAGGCAGTACTGAGTGTGTCTCCACAGAGCTGGCTGACTGAAGGAGACTCAGTGACTCTAAGCTGTGAGGTTAGACACTCCTCTACAGGCTGGAGGTTCAGCTGGTACAGAGATGGTCAGGAGCTCGTCTCAGACAGCAGAAGAGAAGCTGGAGGCTCCTACACTCTCAGTCCTGCTGCTCTAAATCACACAGGAGTTTATGTGTGCAGAGCAACGAGAGGAGAACCAACATTTGACACACAGTCCAGCAACCCACAGCCACTATGGATCACTGGCCCGTCTCCTCCGGTCTCTCTCATCATCCGTCCCGGCAGAACTCGCCACTTTATCAATGACTCTCTGTCTCTGAGCTGTGAGGGACAGAATGACTCTACTGGATGGAGAGTGAGACGATACACACACAGTGGGGAGTTGTTAGATTGTACATCAGTCTGGGTATCAGTTACAGGATATACATGCAACatcagctctctctccacatctcaCACTGGAGTGTACTGGTGCCAGTCTGGATCTGGAGGAAGGAGCCATCCGCTTAACATCACAGTGCACAGTCTGTCCAGTTCAGAAGCTCCATTCTCAGTCCTCTCTCTGCTCAGTTGTCTGGTGGCGTCGTCTCCATATCTGTTAGCGTCCATCATACTGGGGGTGAAATGCTACAGAGCTCGAGCTAAACCTGATGAGGTGAACAGAACAAAAGAACTGATAGAAGAGGAACATCGTACTGAGAGCTGAATTCCAGGTTTTCATGTTAGAGTTCTAATCCTGTGTGCTTTTAGGACCCTGTTAGAGACCCCCAGTCCCTCAGACATTCAGCAGCTTCATTTTCACTCTCTGTCAGTAAATGCAGTACTAGTTATGGGGCAGAGGTGGCACTGTTCAGCTACAGACTGATTGAGTCTTTAAACTCACATGAgtttaatatactataattttaaaatatatttaaaattcatcAGATTACTATTGATCACAAATGACATACAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022677713.1 True 1895 mRNA 0.46 8 14488431 14500190

Neighbor

gene id symbol gene type direction distance location
LOC111194238 NA coding upstream 10 14477554 ~ 14488421 (+)
LOC103039460 LOC108268156 coding upstream 15911 14461990 ~ 14472520 (+)
LOC103039154 LOC103039154,LOC108440646,LOC108268154 coding upstream 30144 14452340 ~ 14458287 (+)
scrib scrib coding upstream 80031 14272829 ~ 14408400 (+)
LOC103037989 puf60,LOC108268151,LOC107598708,LOC107742128,LOC107659444,LOC105889354 coding upstream 218525 14256872 ~ 14269906 (+)
LOC111194240 NA coding downstream 11603 14511793 ~ 14512939 (+)
LOC111194241 NA coding downstream 15280 14515470 ~ 14517074 (+)
trmt10b trmt10b coding downstream 47918 14548108 ~ 14551573 (+)
intu intu coding downstream 70179 14570369 ~ 14598691 (+)
aadat aadat,LOC102781018 coding downstream 100336 14600526 ~ 14617363 (+)
G141501 NA non-coding upstream 1814 14485020 ~ 14486617 (+)
LOC111194202 NA non-coding upstream 46099 14440905 ~ 14442332 (+)
G141467 NA non-coding upstream 251779 14222563 ~ 14236652 (+)
G141459 fam173b,LOC108440663,LOC106941709,LOC107578923 non-coding upstream 274167 14210460 ~ 14214264 (+)
G141415 march6,LOC107686038,LOC107746911,LOC105900596 non-coding upstream 279615 14202989 ~ 14208816 (+)
LOC111194203 NA non-coding downstream 17156 14517346 ~ 14518444 (+)
G141514 NA non-coding downstream 45607 14545797 ~ 14547039 (+)
G141516 NA non-coding downstream 52443 14552633 ~ 14553089 (+)
G141525 NA non-coding downstream 65194 14565384 ~ 14567961 (+)
G141548 NA non-coding downstream 142290 14642480 ~ 14642690 (+)
G141410 NA other upstream 287433 14180665 ~ 14200998 (+)
G141361 tcea1 other upstream 629826 13855603 ~ 13858605 (+)
LOC103029537 adcyap1b,LOC103029537,LOC108437223,LOC107713980 other upstream 1628104 12842798 ~ 12860327 (+)
G141086 NA other upstream 1744978 12741473 ~ 12743453 (+)
G140930 NA other upstream 2106877 12378996 ~ 12381554 (+)
G141495 NA other downstream 27950 14528140 ~ 14530296 (+)
b4gat1 b4gat1,LOC107747893,LOC107745213,LOC107696735 other downstream 278991 14779181 ~ 14784812 (+)
G141740 LOC108440267 other downstream 554467 15054657 ~ 15056973 (+)
G141791 NA other downstream 728520 15228710 ~ 15285457 (+)
G141754 pnp5a,LOC108440276,LOC103368940,LOC107747996,LOC107692836,LOC107728028,LOC108267282,LOC107570765,LOC107703870 other downstream 885426 15385616 ~ 15401904 (+)

Expression


Co-expression Network