LOC103023540 (kiss1ra,LOC108411985,LOC107657423,LOC107599909,LOC107722062)


Basic Information

Item Value
gene id LOC103023540
gene name kiss1ra,LOC108411985,LOC107657423,LOC107599909,LOC107722062
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 31377 ~ 40748 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022677731.1
GCTGAACAGCTGAACTTCCTCTGGACCAATCCCTCATCATGTTCCCCACTGAGAGCTGGAACGTCTCAGAGATGCTGCTGAACGGCTCGGCGGGAAACTCGTCCCTGGAGGACGTGGAGGACGGCGGGCAGCACCCGTTCCTGACGGACGCCTGGCTGGTTCCTCTTTTCTTCTCGCTCATCATGCTGGTGGGGCTCATCGGCAACTCTCTGGTTATCTATGTAATCTCCAAACACCGGCAGATGAGAACCGCCACCAACTTCTACATCGCTAACCTGGCGGCTACTGACATCATCTTCCTGGTGTGCTGTGTGCCGTTCACCGCCACCCTGTACCCGCTGCCCGGGTGGATCTTCGGGGATTTCATGTGCAAATTTGTCGCCTTTCTTCAGCAGGTAACGGTTCAGGCCACGTGCATCACGCTGACAGCGATGAGCGGCGATCGTTGCTACGTGACCGTCTACCCTCTAAAATCTTTACGTCACCGGACTCCTCGAGTGGCCATGATTGTAAGCATCTGCATCTGGATCGGTTCGTTTATTCTGTCGACTCCAATCTTCCTGTATCAGCGTCTGGAGGATGGGTACTGGTACGGGCCGAGGCAGTACTGCATGGAGCGCTTTCCCTCTAAAGCCCACGAGCGAGCATTCATCCTTTATCAGTTCATCGCTGTCTACCTGCTGCCCGTCCTCACCATCTCCTTCTGCTACTCCTTCATGCTGAAGAGGGTGGGTCACCCCACGGTGGAGCCGGTCGACAGTAACCACCAGGTTCACCTGCTCTCCGAGCGAACCATTTCCATCAGGAGCAAAATTTCcaagatggtggtggtgattgtTCTGCTCTTCACCGTCTGCTGGGGTCCGATTCAGATATTCGCCCTGTTCCAGTCCTTCTACCCCAACTTCAAGGTCAATTATGCCACATACAAGATCAAGACGTGGGCCAACTGCATGTCTTACGCCAACTCCTCCATTAACCCCATCGTCTACGGCTTCATGGGTGCCAGCTTCCGCAAGTCCTTCAGAAAGACCTTCCCCTTCCTGTTTAGACACGTGGTGAGGGACAGCAGTGTCAATTCGCGCACCGCTAATGCCGAAATCAAGTTTGTTGCAACAGAAGAGAGCAACACAGAAAGGAAGTGAACAGTGGAGGTAGATCCTGAGGAAATGCTAGCTAGCTGCTTCATTGTCTAGGCACTGGTGCTTACAGTATTAAATGTGGATGAACTGGAGAATTAAAGGTTAacgaagaaagaaagaaaggaacgttgtggaggaggtgagttaGGTGTGAAAGCACAGGATGTGACATTACGGTCCATTACTTTAAGTTCTGCTGAACATTAACTGAAGAACTGAATGTCAGAAAGTGCACAATCCTGCAAAACACAGAATCGCCTGCTCTACAGGTGACTAGCACTAGCGTGAAACGTTAGCTTTCGAAAGCAAGATCTATGATGGGAATCTATTGTACCTAAAAGGGGTTTTAAGGCAAACAGAGAAGACTGATGGAACATCAGCTGAATGGAAGTCCTGCCAGCCGTGATGTGCTGGAACCGGCCGCGGAGGATGTTGGCTAAATGACCCGCGGCGGCTCATGACTCACTTATTGTCTTTAAGACATACTGCGAATCCTCCCCGTGTACAGACACTCACTTTTCCAGCGGCTTATCTCTCCATGTATAATCGACATTCCCGGCACATCCTGGTGTCTGACTCACATTTTCACCCCACACTGTAGTTCTGCACACACGACCCAGCAAACAGCATTTATGTGCTCCACAGACGACAAGCCCAACACACAGCGCAGCCAACAGACCATTAAAATTTATAAGATGAAAAAAAGATCATAATGCATAAATCTTCTCATATGACGAGccctataaaatattaataactgCACATTGTTCTTGAAAAAAATCATGTGATTTTTAGACTTTATTAGATGTCTTGCCTTGCATTGACTGTAAGCTGCACCCAGAAGGCATTCGTCGACAGGAATGAAACTCTGTGGGTTGTTTGGACATTGTAAGACATGCGCATGACTCAAGTTTTACGCTTGACAGATCATGTGACTTAAGAAAAATGCAGCTTATTTCTGTACCTGAGTGTCTACATAAGGTTGTCCGGTTGTGAGGGTTTTCCATTCTGACTGGTGCTGTTGTTTTGTAAAGTATATAGTTCCATCAGTTCCAGCAGCTGGAAGAGTTCTAGAGGTGTCCCATCGTGGGGTTGGCAAAGCGTGATTTGTGATGTTTTCGGTTGAGCGGAAATTACCATACCACACAGAACTGCACTTGTGAAGTGTGTCCATTAGGAGAATTCCACACTCTGACTGTAAGGGAGCCCAGGAGCAGGAGATCATTACTGTATTATGCTGCTTTAACTGTTATGCCTATTACGCTCACGCAGCACTGCACACACCACCAACGGTTTACTGAAACTGATCCGCAGTGGTTTCTTTCCACTGACAATCCAAACACTGTGAATAGTGTGAAGAAGATATATTggtatatattctatatttatcaatatttagtacaaTACCAAAAATACTGGGAAACAGTTTTAAGGCCTTTTCACACCTTTCTCATTTGGTCCATACCAGAATATCAGGTGTGATCAGGTTCCACAAACCACGGTGCAACCCAATGCACCGAAATTTACTCCAATAGAGCTATTCTCAGTCTGAATCAGCTGATCCACTTCCAGttggtttacagtgtgaaactCCTTATTCGGCGGTTCAGATTTTATTCAGATCAATTGAAGGAAGTTATCATCACCCATCAAACAATAGAGGAAGTAAAAGaagaggtgttgtgctgaaatctgtcTCACAGAtgagtacaacagattacaatgctggtgattctgtatct

Function

symbol description
kiss1ra Enables neuropeptide receptor activity. Predicted to be involved in neuropeptide signaling pathway. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Located in cell surface and cytoplasm. Is expressed in brain; fat cell; head; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in central precocious puberty 1; hypogonadism; and hypogonadotropic hypogonadism 8 with or without anosmia. Orthologous to human KISS1R (KISS1 receptor).

NR:

description
PREDICTED: G-protein coupled receptor 54-like

GO:

id name namespace
GO:0007218 neuropeptide signaling pathway biological_process
GO:0007268 chemical synaptic transmission biological_process
GO:0016021 integral component of membrane cellular_component
GO:0008188 neuropeptide receptor activity molecular_function

KEGG:

id description
K08374 KISS1R; KISS1 receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022677731.1 True 2884 mRNA 0.47 5 31377 40748

Neighbor

gene id symbol gene type direction distance location
LOC103047317 kif2c coding downstream 34935 75683 ~ 86111 (+)
klhl20 klhl20 coding downstream 121109 161857 ~ 173049 (+)
dars2 LOC104960769,LOC104948518 coding downstream 136915 177663 ~ 192997 (+)
astn1 astn1 coding downstream 397950 438698 ~ 694723 (+)
tnr tnr,LOC107658355 coding downstream 774090 814838 ~ 969334 (+)
G137596 NA non-coding downstream 14958 55706 ~ 68862 (+)
G137629 NA non-coding downstream 86354 127102 ~ 130239 (+)
G137630 NA non-coding downstream 87420 128168 ~ 128699 (+)
G137639 cenpl non-coding downstream 134332 175080 ~ 176638 (+)
G137627 NA non-coding downstream 152561 193309 ~ 193938 (+)
G137614 NA other downstream 52537 93285 ~ 94573 (+)
rfwd2 rfwd2,LOC107658354 other downstream 721967 762715 ~ 781196 (+)
G137756 kiaa0040 other downstream 940232 980980 ~ 988638 (+)
mrps14 mrps14 other downstream 997113 1037861 ~ 1039970 (+)
G137826 LOC108430781,LOC108267757 other downstream 1451068 1491816 ~ 1499956 (+)

Expression


Co-expression Network