cacybp


Basic Information

Item Value
gene id cacybp
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 1040890 ~ 1044717 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022677752.1
TATTTCGCATGTGACGCTACTTCCGGTAGGGGTGCAGCTCTCGCCGGCGGTGCCGCATTTGGCGCAACACTGTTCCAGAAGAGTCTGCTGTGTCCGCTCAGCTCAGCCGAACCACCGCAGCAGCAGCCGGGAGAGAGAGCGCGGAGTACCCGCTGAACTCAGCATGGAGCTCGGCCAGCAGATTGCAGGACTGGAGGCGGATCTGCAGGAGGTAACTCGTGTTCTGGAGCTGTGCGAGAGCAGCAGAGTGCGAGAGGTTCTCTCTCAGGAGAAGCAGAAGATCGAGAAAGAGCTGAAGCAGAAACAGAGCAGGAGGGAGGCTGGAGAGAGGCCAGACACTGCAGTGAAGGGATACACAGTCAAAATCAATAACTACGGTTGGGACCAGTCTGACAAATTTGTGAAAATCTACATCACACTAAAAGGTGTACATAAAGTCCCGGAAAATGTTGAAGTCAAATTTACAGAAAGGTCTTTCAGTGTACTCGTTAAAGATTTGGATGGGAAGAACCACGAGATGACCATCAATAACCTCCTGTGCCCCGTTTCAGTGGAGGAGAGCAGTAAGAAGGTGAAAACAGACATGGTGATCGTCATGTGCAAGAAGAAGGGGGTGAAGAAGTGGGAGTGTTTAACACAGGTGGAGAAACTAACTAAAGACAAAGATAAATCCAGCTATGATGAGAATGCAGATCCTGGAGAAGGACTGATGAACATGCTGAAGAAAATTTACTCAGAGGGAGATGACGAGATGAAGCGCACCATCAACAAAGCCTGGAGCGAGTCTCAGGAGAAGAAATCCAGAGGAGACGACTTCGACTTCTGATCTCACCAGCATAGTGATCCCACTACCATTCCTCACCTATACGCCATTCCACCACTATACAGTACCACTGTATcactctttattatattttacattttttatactcTTTAATTATCTGCTCATTTTGCTGAAAGTCTCCTACAGGAACAGGAGCGTATGATTGAAATGTGTTGTTAGTTGTGTGAACTTGATGATCTTTATGAACATGTGTGTTTTCAGAATCATATTCattggaaattaaaaaaattaaaatgcagtTTATGAAAAATTCCTGAATGTTTCACATCAGACACGCTTCAGTGATCTAACTGTTCTCTGTTCTGTGCTGTTATAAAAGAGTAAAATGCTTAAACACGGTATAAAAATGATGTCCTTTTGTGAAATATGCACATCTAAATATGCAACATCAGAATCCTAAACTAGATCATAATTTTTAGGTTTCTTCCAAGTGAACACAAACCGctctaatttttatttttttatttttctttaaatctgTTACTTGAATTTGGGTCtgtaatcataaataaaaagtgtcagTTCCTGGA

Function

NR:

description
calcyclin-binding protein

GO: NA

KEGG:

id description
K04507 CACYBP, SIP; calcyclin binding protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022677752.1 True 1374 mRNA 0.43 6 1040890 1044717

Neighbor

gene id symbol gene type direction distance location
kiaa0040 kiaa0040 coding upstream 53184 986421 ~ 987706 (+)
tnr tnr,LOC107658355 coding upstream 71556 814838 ~ 969334 (+)
astn1 astn1 coding upstream 346167 438698 ~ 694723 (+)
dars2 LOC104960769,LOC104948518 coding upstream 847893 177663 ~ 192997 (+)
klhl20 klhl20 coding upstream 867841 161857 ~ 173049 (+)
plk3 plk3,LOC107722069,LOC107563563,LOC107658359,LOC107726922 coding downstream 1550 1046267 ~ 1057525 (+)
LOC103047582 apol1,LOC107103896 coding downstream 25290 1070007 ~ 1082321 (+)
LOC103047078 NA coding downstream 40091 1084808 ~ 1089511 (+)
htr5a htr5a,htr5ab,LOC103024346,LOC108412811,LOC107684958,LOC107659435,LOC107591053,LOC107742155,LOC107598724 coding downstream 83360 1128077 ~ 1166419 (+)
insig1 LOC108412812 coding downstream 172793 1217510 ~ 1223829 (+)
G137754 NA non-coding upstream 28895 906454 ~ 1011995 (+)
LOC103021626 NA non-coding upstream 54736 980933 ~ 986154 (+)
G137737 NA non-coding upstream 290480 749841 ~ 750410 (+)
G137729 NA non-coding upstream 386441 654221 ~ 654449 (+)
G137725 NA non-coding upstream 513823 526248 ~ 527067 (+)
G137782 NA non-coding downstream 56671 1101388 ~ 1226517 (+)
G137839 NA non-coding downstream 306557 1351274 ~ 1455746 (+)
G137850 NA non-coding downstream 395546 1440263 ~ 1440805 (+)
G137856 NA non-coding downstream 463548 1508265 ~ 1509554 (+)
G137857 NA non-coding downstream 464936 1509653 ~ 1512939 (+)
mrps14 mrps14 other upstream 920 1037861 ~ 1039970 (+)
G137756 kiaa0040 other upstream 52252 980980 ~ 988638 (+)
rfwd2 rfwd2,LOC107658354 other upstream 259694 762715 ~ 781196 (+)
G137614 NA other upstream 946317 93285 ~ 94573 (+)
G137826 LOC108430781,LOC108267757 other downstream 447099 1491816 ~ 1499956 (+)
LOC103042893 vps4b,LOC107727524,LOC107681797,LOC107710065 other downstream 790760 1835477 ~ 1851313 (+)
G137929 NA other downstream 978038 2022755 ~ 2024386 (+)
LOC103045052 cfap57,LOC106594647 other downstream 1855758 2900475 ~ 2936129 (+)
LOC103024858 NA other downstream 2037339 3082056 ~ 3084865 (+)

Expression


Co-expression Network