plk3 (plk3,LOC107722069,LOC107563563,LOC107658359,LOC107726922)


Basic Information

Item Value
gene id plk3
gene name plk3,LOC107722069,LOC107563563,LOC107658359,LOC107726922
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 1046267 ~ 1057525 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022677753.1
TCCGGGCATGTTTCAGCAGCGCTGCGGGGCGGGCGGATCTGTTCGGTCTGGATTTTTGTGAATAAAAGCCCAGAAATAATCCGCTTCCACGCCTCGGATTAACCCGGATGAATGGACTGTACCAGCTTTACTACAGCGCAGCGCCGCTCCTGCCACATAATGAACCCGGAATTACTGAACCCGTCCCCGGACCGCTCCCCGGCAGCACCGCCGCCCAAGCCGAACCGGAACACCGCGAACAAATGTGAACAGCCGAAACCGGAGCTGGCGCAGGTGGTGGTGGACCCGAAGAGTGGGAGATCTTACACTAAAGGAAAGCTCCTGGGAaagGGAGGGTTCGCTCGCTGCTATGAGATGACAGACCTCGCCAGCAGCCGGATGTATGCAGTGAAGGTTATTCCACAGAGCAGAGTGTCCAAACCACACCAGAGAGAGAAGATTACGAATGAAATAGAGCTTCACAAAACCCTTCAGCACAAGCATGTGGTGAAGTTTTCCCATCATTTTGAGGACCAGGACAACATCTACATCTTCCTGGAGCTCTGCAGCAGAAAGTCCTTGGCACATATTTGGAAAGCGAGACACACCCTCACGGATCCTGAAGTGCGTTACTACCTCAGGCAGATCATATCCGGCCTCAAATACCTCCACAACAAAGGAATCCTCCACAGAGACCTGAAACTAGGTAATTTCTTTGTAAATGAAAATATGGAATTGAGATTAGGAGACTTTGGACTGGCTGCTAAGTTGGAGACGGTTGAGCAGCGAAAGAAAACCATTTGTGGAACACCAAACTACCTGGCACCAGAAGTGTTAAACCGGCAAGGCCACGGGACCGAGTCCGACGTTTGGTCCTTGGGTTGCGTAATGTACACGCTGCTGTGTGGAAACCCTCCGTTTGAAACCTTAGACTTGAAAGAAACGTACAAATGCATAAAGGAAGTGAGATACAGTCTCCCGCCTTCACTTTCACCAGCGGCACAGAAGCTAATCTCCGCCGTCCTGCAGAAAAACCCCAGCGACCGCCTCACTCTCGACCAGATTCTGGTCCACGAGTACTTCAGCAAGGGCTTTACTCCAGACAAACTTCCCCCCAGCTCCTGTGTGATGGTCCCAGAGCTCAGCCCACCCAGTCCTGCCAAGAAGTTCTTCACCAAAATGGCCAAGAGCTTATTCGGCAAAAAGAAGTCCAAAGTAGAGAAAAAGCCCAGTGAAGATAAGGAGGACATCTCGAAGCTTGTGTCCGGCATGGTGAAGCACTCCATCAGCCGGCAGATCAGCTACAAGACCGTGGGGGTGAATGAGGCTCCCTCTCCTGTGGGTCAGCTGGCCAGCTCTGGACCTCTGGACACACCGGGTGAAGAAGAGTCCAGAAAATCAGCTCCTCGCTCGTTTAAAGGCACAGTGGCCAGCAGCACTGACGCAGGTGAAGGCACCTTGACTCCAGCAGCTGTGGCTGAAGCGGCCAAGAAGGTTCTCACCAGCTGCTTATCCACCATGCCGACAGcttcgaAAAACCCTCCGTGTCTGGAGAAACCTCAGCCTTTCCTGTGGGTGAGCAAGTGGGTGGATTACTCCAACAAGTACGGCTTCGGATATCAGCTGTCCAATCAGAACGTCGGGGTCCTCTTTAACGAAGGGACTCACCTGAGCCTGTGTGATCAGCGCAGAACGGTGCATTACTGcctgaccaacaacaaacaCTTCACTTTTCAAGCTGATTCGTTACCTGAACCTCTTCAGAGGCAGAAACACATCGTGGAACTCATGGCCAAATACATGGAGCAGAATCTGATGgagGGAGGAGATCTGGGGTTCGAGGAGCAGCCGCCTCCTTCTGCATCTCCACCTCTTCTCCTGCAGTGGATAAAAACTGAACATGCCCTGGTCATGCTCTTCAACAACGGCTCAGTACAGGTGAACTTTTACGCTGACCACACGAAGGTCATCCTGAGCAAGTCTGCAGACTCCTCCTACCTGCTGACGTACATCAGCCGGGAGCGCGTGTCCACCTCCTACCCTCTGCACGTGCTCAGTGAGAGCGGCTGCTCGTCGGAGCTGCGCCACCGCCTGCATTACGTGGTGCAGCTGCTGCAGCACTACGCCAGCGCGTGACCGAACCCCCAAACCCCCAATAAAAAAAGCTTGGGCTGCGTGCCATCAACACTTgctgctaaaaaaataatacaaaaaataaaatatcaaaaggACTTAAACAAAGGCTGGaaccagaagtcatgggacgcACCGTGCAACGTTCTGGACTTTTCCTTTAATACTTGACCCGACGCCTGACACTTACACTACCGACGTGACGtgcaaacacacaacacagcacTCGGCCCGTTCTTTCAGCTGGACTGGTGGGAGGGGCTTCAACATTGTGGGAGGGGCTTGAACATTGTGAAGAGTGCTGAACTGAACGTCTTCTACTACTCAAGATGAAACCAATCAGAAACCAGGCAGAGGAGCAGAGGAGCCTGGCGTTTTATGCTTCGACCACGAGCCTtccatttctttcttcttcttctcctcctttttctCAAAGTTCCAGACGTGTAGAGGTTTATTTTACAGAGCTACACGCCAGATATGGACGGCTTTAGACTTCCGAGAGTTTATTTTCAGGAGAAAGGTTTATTTTAAAGCTGGCGGAGGAGGGTGGCGAATTCTGCGCAGTGAAGGACCCGCAGTGAGGCGTGGAGGGGAGCGTAAAGTGCCTTTCTTCGTTGACGTTTGTCTGGGTTGTGCAATAATGGCCCTTCTGAACCTCAAGCTCGAATAACAAAAGGAGGGATCAGAAAAAGGCATATggatattatcatgatattgtTGTGCTTCAATATGATTGATTGATCGATTATTTTCATGGGTTTAAAGTCCCCTGGGTTTCATGTCACTACAGACAAACCCGTGGTATAAGCTTTTTTTGCCTGATCAATGGTATTATACTCTTTAATAATATCTGTATCAGAAggaaaactaatttaaaaaactgtttcATTTGTGCCTCAAACTCTGTTACTTGTTACACGCCTTCCATCTTATGATGTATTCCTTAATACTGTGATCCTGACTGTAGGGAGTGAAAGAAGTAATAAGTATTGTGTTTATATGATAATTTGTGGAGCTATTACCTTTTTcagacaattattattattattattattattattattattaataataattttgtggcACGTgttctctctatttatttattttttatttatgctttattattttatttattaaaacagtaaatggtGTGAACACTGGGTAATGTTCGAGATcactttttttatgtgtttgggAGGGGAAATAAAGTTTCATGAAATGCA

Function

symbol description
plk3 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in Golgi disassembly; cellular response to DNA damage stimulus; and regulation of cell cycle process. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm; microtubule cytoskeleton; and nucleus. Is expressed in liver; spinal cord; and spleen. Orthologous to human PLK3 (polo like kinase 3).

NR:

description
serine/threonine-protein kinase PLK3-like

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K08862 PLK3, CNK; polo-like kinase 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022677753.1 True 3341 mRNA 0.48 15 1046267 1057525

Neighbor

gene id symbol gene type direction distance location
cacybp NA coding upstream 1550 1040890 ~ 1044717 (+)
kiaa0040 kiaa0040 coding upstream 58561 986421 ~ 987706 (+)
tnr tnr,LOC107658355 coding upstream 76933 814838 ~ 969334 (+)
astn1 astn1 coding upstream 351544 438698 ~ 694723 (+)
dars2 LOC104960769,LOC104948518 coding upstream 853270 177663 ~ 192997 (+)
LOC103047582 apol1,LOC107103896 coding downstream 12482 1070007 ~ 1082321 (+)
LOC103047078 NA coding downstream 27283 1084808 ~ 1089511 (+)
htr5a htr5a,htr5ab,LOC103024346,LOC108412811,LOC107684958,LOC107659435,LOC107591053,LOC107742155,LOC107598724 coding downstream 70552 1128077 ~ 1166419 (+)
insig1 LOC108412812 coding downstream 159985 1217510 ~ 1223829 (+)
LOC103046777 NA coding downstream 183710 1241235 ~ 1245769 (+)
G137754 NA non-coding upstream 34272 906454 ~ 1011995 (+)
LOC103021626 NA non-coding upstream 60113 980933 ~ 986154 (+)
G137737 NA non-coding upstream 295857 749841 ~ 750410 (+)
G137729 NA non-coding upstream 391818 654221 ~ 654449 (+)
G137725 NA non-coding upstream 519200 526248 ~ 527067 (+)
G137782 NA non-coding downstream 43863 1101388 ~ 1226517 (+)
G137839 NA non-coding downstream 293749 1351274 ~ 1455746 (+)
G137850 NA non-coding downstream 382738 1440263 ~ 1440805 (+)
G137856 NA non-coding downstream 450740 1508265 ~ 1509554 (+)
G137857 NA non-coding downstream 452128 1509653 ~ 1512939 (+)
mrps14 mrps14 other upstream 6297 1037861 ~ 1039970 (+)
G137756 kiaa0040 other upstream 57629 980980 ~ 988638 (+)
rfwd2 rfwd2,LOC107658354 other upstream 265071 762715 ~ 781196 (+)
G137614 NA other upstream 951694 93285 ~ 94573 (+)
G137826 LOC108430781,LOC108267757 other downstream 434291 1491816 ~ 1499956 (+)
LOC103042893 vps4b,LOC107727524,LOC107681797,LOC107710065 other downstream 777952 1835477 ~ 1851313 (+)
G137929 NA other downstream 965230 2022755 ~ 2024386 (+)
LOC103045052 cfap57,LOC106594647 other downstream 1842950 2900475 ~ 2936129 (+)
LOC103024858 NA other downstream 2024531 3082056 ~ 3084865 (+)

Expression


Co-expression Network