insig1 (LOC108412812)


Basic Information

Item Value
gene id insig1
gene name LOC108412812
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 1217510 ~ 1223829 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022677758.1
CACGGCGCTTCGTTTTTCTTTGCAGGGCGCGTGAGGAGCTGAGAACGGGAACAGGCTTGGGAGGAAATGagcttttacttttagttttatttcattaaaacaaCGCCTCAGTTAGAAAGTTAAAGTATGTAACCAGAAACAAACAGTAGAAAAGAGTCTGCAAATATAGGGTTTAGTTTTTACgacatttaaaaagaagatCAGGAGTGAAACCGAGAAGAAATCGAGAGCCCCATGCCTAAGCTGGAGGACCGCTGCTGGAGCTGCTCTTGTTCCCCCGGTATGAAGTCGGAAGGGTTCCCGCTGGCCTCCAGGGCCCGGGAGGTGATGTCCGGGGTGGCCGGGTCTGTGAGCGAGGCTTTCGCCTCTGTCCGCCGGCTCCACTCCACCAACCTGGTCCGCCGCGGTCTGGTTCTGTTCACCGTCGGCGTTTTCCTCGCTCTGGTGCTTTACCTGCTGCAGATACGGAAAAACGTCGTGCTGTTTCCAGAAGAAGCTCTGGACACGTTATATTCCTCCTCGTGGTGGATCCCTCTGGGGTGCGGAACCGCAGCCGCTGTGGTTGGCTTGTTATACCCGTGCCTGGACAGCCACCTCGGTGAGCCTCACAAGTTCAAGAGGGAGTGGGCCAGCGTCATGCGATGCATCGCCGTGTTTGTGGGCATCAACCACGCCAGTGCTAAACTGGACTTCGCCAACAACATGCAGCTCTCTCTTACTCTGGCCGCTTTGTCTCTGGGTCTGTGGTGGACTTTTGATCGGTCAAGAAGTGGCTTTGGCTTGGGACTGACCACTGCTCTCCTGGCCACACTCATCGCCCAGCTGTTGGTCTCCAATGGGATCTATCAGTACACGAATACAGAGGTTCGCTCCGTTCGGTCCTGGCTGCCTTGCATCTTCTTCTCTGGGGGAGTGACTGTAGGAAACATTGGACGACAGTTGGCAATGGGTTCAATTGAGAAACCCCACAACGACTAGAGGTGAGCTAGAGGAGATCCTCTGCTCTGCTGAAAACCAGCTCGGACTTCCCGCCAACTCTGAACCCTCAGAATCCCTCAGCTCACCTGAGAGACCTGAGAGAGACGAGACGCTTCTGTCCACTTTACTTTCTCATCCTTTCAGCTCCTGTTCATCTCTGAGAAAGAGGAGCCCAGTCTGAGAGGACCTTTGTGCCAACTGGACAGCAAAACTCCAAATCTGACCCCTGCCTTCATCATagtcatcatcatcctcatcatcatcatcatcgtcctTAATCGATCTGGCACTGTGTGTTGGCTGATGGGAGGAGGACACTGAGTAGCACAAGGTTAAATTAATCCAGACGGACACTTAAAGGACTGATTTAGCCTGGTGTTGATTGTGAtggagtgtgtgcgtgtgtgtgtgtgtgtttgagcgtGCTCTGATATTTTGGGGTATGTGTGCAGAAGTAAGGaagtagggatgcaccgataCGGACGGGAAATTTGAGGCTGGTGATATATTGATGATATTTGTCGATTCCGATGTTACTGACACCAATAtgcacttttatatatatatatttatatatatatatatatatatatataacggaCACTCATTGAAACGTTGAAGTGTATTTGTATCATATACCAATTTACATTATTGGTAAAACTTTAGTATTTTTCCAATTCTGATACAgttcaaacatttatatatgtttttttgccAATTCTAATATGACTCCGATATCCATGTGCATCCCTAACGTGTAGATCTGAGATATTAGATCATACacacaaaagtgtaaaaaaaaaaaaaaaaaagaaagtggtgGCCAAATGAGTGctgcattatatttttattttattatttttatttttatgtttttttgaggAGGGGGGGGGTGGTATAACTCTAACGAAAGGGAATGAAGTTAAGGCTGCGTGTGAAAATGTCCTCCATCCAAGGAGGCACGTTTTGATTTTTGTGTTAGATTTGTGTTATAGATCACACAGAGTATTATTTCGAGATATCAGTCTCGTTTATGGCCAACAAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022677758.1 True 2023 mRNA 0.46 6 1217510 1223829

Neighbor

gene id symbol gene type direction distance location
htr5a htr5a,htr5ab,LOC103024346,LOC108412811,LOC107684958,LOC107659435,LOC107591053,LOC107742155,LOC107598724 coding upstream 51091 1128077 ~ 1166419 (+)
LOC103047078 NA coding upstream 127999 1084808 ~ 1089511 (+)
LOC103047582 apol1,LOC107103896 coding upstream 135189 1070007 ~ 1082321 (+)
plk3 plk3,LOC107722069,LOC107563563,LOC107658359,LOC107726922 coding upstream 159985 1046267 ~ 1057525 (+)
cacybp NA coding upstream 172793 1040890 ~ 1044717 (+)
LOC103046777 NA coding downstream 17406 1241235 ~ 1245769 (+)
rbm33 rbm33 coding downstream 76756 1300585 ~ 1335193 (+)
rnf32 NA coding downstream 213111 1436940 ~ 1449027 (+)
LOC111194186 NA coding downstream 265476 1489305 ~ 1491340 (+)
cdc73 cdc73 coding downstream 341101 1564930 ~ 1594076 (+)
G137754 NA non-coding upstream 205515 906454 ~ 1011995 (+)
LOC103021626 NA non-coding upstream 231356 980933 ~ 986154 (+)
G137737 NA non-coding upstream 467100 749841 ~ 750410 (+)
G137729 NA non-coding upstream 563061 654221 ~ 654449 (+)
G137725 NA non-coding upstream 690443 526248 ~ 527067 (+)
G137839 NA non-coding downstream 127445 1351274 ~ 1455746 (+)
G137850 NA non-coding downstream 216434 1440263 ~ 1440805 (+)
G137856 NA non-coding downstream 284436 1508265 ~ 1509554 (+)
G137857 NA non-coding downstream 285824 1509653 ~ 1512939 (+)
G137858 dcaf8 non-coding downstream 292650 1516479 ~ 1517928 (+)
mrps14 mrps14 other upstream 177540 1037861 ~ 1039970 (+)
G137756 kiaa0040 other upstream 228872 980980 ~ 988638 (+)
rfwd2 rfwd2,LOC107658354 other upstream 436314 762715 ~ 781196 (+)
G137614 NA other upstream 1122937 93285 ~ 94573 (+)
G137826 LOC108430781,LOC108267757 other downstream 267987 1491816 ~ 1499956 (+)
LOC103042893 vps4b,LOC107727524,LOC107681797,LOC107710065 other downstream 611648 1835477 ~ 1851313 (+)
G137929 NA other downstream 798926 2022755 ~ 2024386 (+)
LOC103045052 cfap57,LOC106594647 other downstream 1676646 2900475 ~ 2936129 (+)
LOC103024858 NA other downstream 1858227 3082056 ~ 3084865 (+)

Expression


Co-expression Network