rbm33 (rbm33)


Basic Information

Item Value
gene id rbm33
gene name rbm33
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 1300585 ~ 1335193 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022677759.1
CCCAGGATGCACTGCAGCGCGGCCTccgtgtgtatgttgtgtgtgtgcggttCCGCAGCGGTGCTTTTCGACAACACTGACTCGCAGAATCCCGAAAATTCAGCTTTTATACCGCATTAATTCGCTTTATAACCCGCTGCTGTGTGTTCCTCAGCCTCCCCTCTACCTCCGATGTCCCCGGCGGCAGCAGGCAGGACTTAACCCGCACCCTCCGAGCCGATGGCGGCCAGCGGCCCAGATGAGTTTAATGAATACGACAAGCCGGGAGCTGAGAGGTCGAGGAGGCGGAGAGGAGAAGACGATGACCTGGACAGTGATTTAGAAGAGGACTTGCTGGAGGAAGACTGGCTTTCATCTAAAAAGAATCCATCAGAACTGTCAGATGAAGAACTGAATGATGATCTGCTGCAGAGTGATGAGGAAGATCAGAACGGGGGtggACAGGGTGAAGCGGTGAGTCTGAACGCGACTCTGGGCTTCAGCACCTCCTACGACTTGCAAGAGGAGAACCAGGAAGGAGGAGGATATGGAGAAGAAGGGTACGATGAGACGGGGGAAGGAGGTTTCTCTCAGGAAGGAGGAGAGTATGGACAGGAAGAAGGGATGGAGTACTCCACAGGGCAGAATGATGAAGCTTATGAAGATGAAGTGCTGGAACTTCAGATTGATGAGCCACTAGATGATGAGTTTCAAGTTGGGGATTATTCTGGTGGGTATAGTGCAGAGCAACCACAAGAGCATACTGACCAACCAGAAGAGCCAGAGGCGGAAGAGGAGGAGCCACAGGCAGAAGGGGAGGATCAAGATGGATCCTCCCAGGTTACAGAGTCAGAGGAGTTGGAGCCTGAACCAGAGCCTGAACCTGAACTGGAACAGGAAGCTGAAGAAGCTAAAGAAGAATCAGAcgaggatgatgatgaggaaGAGTCGGGCCGACTACGCTTCAAAAAGGAGCGCACAGACGTCACTGTGGTCCGACTGTCTGATGCTGCCAGTAAACGAAGAAACATTCCAGAAACGTTAGAACTAACCGAAGAGGCCAAAGCAGATCTGTTGGAGTTTGAGGAGAAGGAACGTCAGAGGAAACAGGGTCGTTTCGGAGGGCGAGgaagagggggaggaggaggaagaggagggatGCAGGGAAACAGAggtagaggaggaggaggaggaagaggaggactTCCTATGTTTGGGATGGGAGATTTCCGTGGAGACGGAGGTGCTGGACGAGGCAGAATGAATGAACAGAGGCCTCCGCTGATGCAGGTCAACTTAGGCATGCAGCCCAGAATGGCTCTTCCTCAgtctcatcatcatcaccaccaccaccatcatcaacCTCGGCATCCAGGCCCTCGTGGATCTCAAGGTCTTTTCGCAAACCCCATCAACCCAATACCCCAGCAACCCCTGCAGATGCTGCTGCCCCACCGCTCCCCAGGACCGCCGCCCCGCCCACAGCCGGACCTGCACCGCCCGCCCCCGCCGGCTAACCACACCCACtccaaccagcagcagcagcaacaacagccCAAAAACATCCACATCAATCCACACTTCAGAGGACCGGCATCCTCACCAGGGCAAGTTCCATTGATGCCTCCTACCCAGAACCAGCCCAGGCCGAACATCAGCCCTCAGAGATTTCCGGGTCCTGCAGATTTCCAGCAGCATCTCCAAGGCAGTTTTGTGCAGCACCAGAGACCCCCTCCTCAGGACCAGTGGAGAGGACCCCCGCCCCCCCACCAGGAGAGAGAGCCCTTCTTTAACAGTGagCCGCGTTTTCCTGGTCAGCATCTCTTTGATCTGCCAGGCCCCGCCCCCCTCATGAATAATAACCTGCTTTCCCTCACCGGTCAGAACCCCCTGTCCTTCCCCCAGCCCGGGGGACTGGGCGGGGCTCCAGGCCCCGGGCCTAACTTCGGGCCCCTGGGCATTGGGCAGGGCCAGGGGCCTCCGGGGGGAGGAGGCATGTTCCAGAGAGAGCCGCCACGCCCCAATCTGCAGCACAGTGGCCCCCCGGTGTCCCCCGGGCCCCGCGGGTTCATGGGCCACCGGCAGCCTTTTCCCCCCCAGCAGCCGGGGCCTCCGTTCAGCCCCCAGCACATGAACTTCGGGATGCAGGTACGCCAGAGAggTATAATGCAGCCCCACTCTCAGCCCCCGCACCACGATTCCCCCTCCCATCACTCTctccaccaccagcagcagcagcagcacagacaGGACCTCCAGCAACACGGCCACCCCCAGcagcaccccccacccccccataACCAGCACCACCAGCGCCAGCCTGCAGAGCAGCACCCCATCCTGCAGCTCTCCCACCCCCCCTTCCGCCAGCCACTGCAGGGCGGCCCCCGGCAGCTGCAGCAGCGCAGCCAGAACGGCCAGCAGCGCGGGAACCCCGGCCGCATGAGGATGatgtcTCCCTCCTCCATGCAGCAGCTTCAGGGCCCTCAGCGCAACAGCAACCTTCGCGAGCTGCCCATCGCCCCCGGCAACACCACCGTCCGccaggctccgcccacaaacCAGCCCAAACCAGGTACCAGAGCGACCCAGGAGCCTAGACCTGGACAGGTACCGCCCGGAGGAGCCGCCGGCCGAGGACGCGGTGCCCCTAAAGCAGCCCAACGTCCGGCCCAGCCCCCTGCCCTCACAGAGACGCAGAAAGAACCAGCACCTGCTCGGCCCAGTGCACCTGCACAGGTTCCAGACGAGGACGAGGAGACCCGTCAGTATCGGCTGAAGATCGAGGAGCAGAAGCGTCTGAGGGAGGAGATCCTGAAGAGGAAGGAGATGCGGCGGCAGATGCAGGCGGGGCTCCGCAAGAAGGAGCTGATGGAGCGAATTGGCTCCCAGAACCCCAACCAGACCCAAACCCAGACTCAACCCCAACCCCATCCCCAAACTCCAACCCAGAAcaccccaacaccacccagctcTCAGCCCCAGCCTGCCCCCCAGCCCCCCCAGCAGATTCCCTCTGCCCTCGCCCCAAACGGAGACCCTCAGACCCCCGCTCAGCCCCGCGGAAACGTTAAAGCTCGCATACAGACCTCCAGACCCGACCCACTCAGTACCAGAACCGAGCCCGTCCCTCAActccagcagatccagcagctccagcagcagagGAGACCTCCGGCCCAGCAGAACCCCCCCAGACAGTTTCCGATCCCCACCGGAAACCCTCAGCCGCAGGCTCCGAGGCCCGGAGGAAAGAGGACTGTGATGCAGAGGGCAAACGTCGGCGGGTCCCCACAGATCCCACAGAAAGTACGAGTGGTCAAACGCCTGACTGGGGGAGATGTAGGTCCTAACCCTTCTGctccactaccaccaccactgtcaccattatcatcatcccacccacagcagcaccagcagcttcagcCTCCATcccaacaacagcagcagcagcaacatccTCAACAAcctcaacagcagcagcagcaaatgGGTCGACCCCTCCCTCAGCAGAGGATCAGCACAGTGAGGAAGGTCACTGTGGCACCAGGAGgagcacagcaaccaccaccaccaccacaggaagctgctgctgcaggaggaggagcagcGAATCAAACTAACCGGGTTGTAGTTCCAGGTAGGGGTCGAGGTCGAGGAGCTCCAGGGGGACGAGGAGGTGGAGGGCGGATGGTGCAGCAGGCCAGGCTGAGCCCCCGGGCTCCGGACACTCCTCAGCTCAGCACCGTCTCTATTGATGGTTTATCTTCAACCACCACTGAGAAACAGATAAAGAACCTCCTCAACTCCATCGGCCCCTTTCAGATGTTTAAGATGCTTCCACAGCAGAGAAAAGCCGTTGCCAAGTTTGTGAACCCCCAGCATGCTCTGAGCTTTCAGCACAGCTTCCACAGGCACATGATAGATTTGTCGCATATCGATGTGACCATTATCGAGGGCTGAAGAAACTCCCGAGAGCTGATTGGAGGGAAAGACTGCAGGAGGAGGGACTGCGGTGGGCGGCAGCTGCGGGATGGAAAGCCTGAGCTTCACTGTTTAAAGCTCTGAATACTGAAAACAAGCCTGGACCACAGGAACCGCAGCTACAGGACGATCCGGATCAAGACCTGAGGGACTGTTTTACATCAGGTCTGGGATGAGAAAAAGGAAAGACTGAACAGAACACAAACTCTGGTTGTTGATCTTCTTGTAAATATATGAAAAGTgattctttaactctttaactaAAGCCGTGAACTCCTAAACTGaaccacacacacgcagacagacagacagacagacagacagacgggcGGGGCGAACTTTGTGTTTGTCGTTTAAATGCTTTATAGTGAGGCATCCTGACTTTTTGATATAAAGCAGTAAAGAAAGAATGGAGGAAGGAGGAGGatttgggtttttttgtttgttttgttttataaagaagtgCAAATTAATTAACAcgtagataataataatgatgatgctGGATAATGGTTGCTCCCATCCGTTAGCGAGAACTGTTCCTGCACGgtttgttctttatttctttatttctttatatctttcttttattttaaacactccGGGAGGCATCAATTTTGTAGTGCAGgttgtcttttctcttttctgccagcagagggaagcatacgctctttaaaaaaataaaggaaaagaaaaatcttaaatataaagGCGATTCAGAGGCTTCTTTTGAGCTTTGCTGTGGAAGAAAGAACTAAAATATTGTtgtggagagaaggagagaaagtgagcgaaaggaaaaacatatatattgaaCGTATTCgactttaaaaaccttaaaaagttTCTCTACACAATATATTTCTCTACTGAATATATTTTACAGAAAtgcttaaaatctttaaaatgctTCTTTGTGGAGCCAAAATGGTCCTTCTGTAgcatatctctctctatctctcagacAAGCCTTTATAGCGAGTTGTTAAGAGTTTTATAGTGTTATGAAGCTCTATAATGCGGCAGGACTTCAGGAGTTTATGATTCGTGATGTTTGGTTGGATTTTTGTATTAAGTGTTTGTTTGGTCGAGATTTTGTCGTTTTGTCTGGTTGATTTGTCTTGGTTTATTTTTCAGCAACTTGGTCTTCAGCTGCATCCAGTACGTAGTTAACTTTTATTATAAAGGGTTTTAATTTGgataaaatagcatttgttttaTAGAAATCATATCGTAGATCGTAGAACACTTTTCGTTCCGAGTTTCCAGAGGTTTCAGGATGTTTCCAGATGTTTCAGGATGTTCAGAGTCGTGTTAACGTGGTACAgaatgtgtaaaatatgaataatgtaTGGGATAGATTATTGGTTTTTGCTGGTGTCCAGTGGTGACCACTGCAGGGGCCAGACAGTGGAAGAAGTCTGAGCTTGATTTTTTTCGTCACCATACTGTGAAATCTACTCGTTTTGAAGTCCCTTATCACTGTGGTCAGAAGGGTGCGGCTAcgtgcttagcttagcttagcttagcttagcttagcttagcttggcTGGCTGTGTGTTTGGTCTGAAGCTCGTAGTTTCAGGAGTTCAGTGCTCTTCTCGGGTCCGTCACACATTCCGCACGTCCGTGTTTGGTCACTTTGATCGTCTTCGGCCGTAAAACTGCTGCATTCATGAAGCTcctgttgtatttttttatgaattttcatGGAGGATGATTTTTTGAGGGAAAAAAGCTGAAAAGCTGGAAAAGTTGGCAGCTTCTTCGTGGTTCTacctattttttgttttaggaaAACTGACTGAATGATTGATTTGGACTGTACGTGAGTTAGAGCtgtaacgattagtcgatattaTCAAAAATGTCGatataaaggtaaaaaaaaagttaattgtcTACTAATCACCAGCATGTCAAATCTGATATATCCTGTTATTTCTATTAATATCTTTGCACTGATTCAACACACAGAGAATTCATCTTCTTCCCCTCgccatttatttatctataattattatttaactggtTAAATAGTCTCTTCAGCATCTGCCGCCTCTCATCTGATCATCTGTGATTGGTGGATCTGTGCTTCcacctgttttaaataaatctcaCTATATAATAgactttatacatttataaaagcaAACTTCCTATTAAACTAAAGGTAACTTAAAGAAAATAATCTGGCACTGGAGCACAATAGAAATGTCAacctttatattattaaaattaaaagaacagACTCTATAGATTTAGAAAATGCTTTAACTGCgtttttgtgttgtattgttgCAAAGATATTAATAGAAATATCAAAATACTATAGATTACAATAGATTACATAGTTCCTCATTAAATATCAGcacttaatacatttaaatggcaATGTTCTGGACATTTAAAGGACATTAAAACTcaatgtttagctgtttctagCAATTTCTATCAAGAAATAAGGC

Function

symbol description
rbm33 Enables RNA binding activity.

NR:

description
PREDICTED: RNA-binding protein 33 isoform X1

GO: NA

KEGG:

id description
K25078 RBM33; RNA-binding protein 33

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022677759.1 True 6431 mRNA 0.51 21 1300585 1335193

Neighbor

gene id symbol gene type direction distance location
LOC103046777 NA coding upstream 54816 1241235 ~ 1245769 (+)
insig1 LOC108412812 coding upstream 76756 1217510 ~ 1223829 (+)
htr5a htr5a,htr5ab,LOC103024346,LOC108412811,LOC107684958,LOC107659435,LOC107591053,LOC107742155,LOC107598724 coding upstream 134166 1128077 ~ 1166419 (+)
LOC103047078 NA coding upstream 211074 1084808 ~ 1089511 (+)
LOC103047582 apol1,LOC107103896 coding upstream 218264 1070007 ~ 1082321 (+)
rnf32 NA coding downstream 101747 1436940 ~ 1449027 (+)
LOC111194186 NA coding downstream 154112 1489305 ~ 1491340 (+)
cdc73 cdc73 coding downstream 229737 1564930 ~ 1594076 (+)
LOC111194189 NA coding downstream 291762 1626955 ~ 1638255 (+)
LOC103022771 NA coding downstream 349200 1684393 ~ 1692239 (+)
G137782 NA non-coding upstream 74068 1101388 ~ 1226517 (+)
G137754 NA non-coding upstream 288590 906454 ~ 1011995 (+)
LOC103021626 NA non-coding upstream 314431 980933 ~ 986154 (+)
G137737 NA non-coding upstream 550175 749841 ~ 750410 (+)
G137729 NA non-coding upstream 646136 654221 ~ 654449 (+)
G137839 NA non-coding downstream 16081 1351274 ~ 1455746 (+)
G137850 NA non-coding downstream 105070 1440263 ~ 1440805 (+)
G137856 NA non-coding downstream 173072 1508265 ~ 1509554 (+)
G137857 NA non-coding downstream 174460 1509653 ~ 1512939 (+)
G137858 dcaf8 non-coding downstream 181286 1516479 ~ 1517928 (+)
mrps14 mrps14 other upstream 260615 1037861 ~ 1039970 (+)
G137756 kiaa0040 other upstream 311947 980980 ~ 988638 (+)
rfwd2 rfwd2,LOC107658354 other upstream 519389 762715 ~ 781196 (+)
G137614 NA other upstream 1206012 93285 ~ 94573 (+)
G137826 LOC108430781,LOC108267757 other downstream 156623 1491816 ~ 1499956 (+)
LOC103042893 vps4b,LOC107727524,LOC107681797,LOC107710065 other downstream 500284 1835477 ~ 1851313 (+)
G137929 NA other downstream 687562 2022755 ~ 2024386 (+)
LOC103045052 cfap57,LOC106594647 other downstream 1565282 2900475 ~ 2936129 (+)
LOC103024858 NA other downstream 1746863 3082056 ~ 3084865 (+)

Expression


Co-expression Network