rnf32


Basic Information

Item Value
gene id rnf32
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 1436940 ~ 1449027 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022677760.1
CAGGCGGCGCCCCGGAAGAAACGCTGTTGCCCAGGAAACCGTGTAAACTAATCCTGCCGGCGACCATGCTGAAGGGCCGGAGCTCCTCCAGAGAGGACAGGAGGAAGTTAGCCGTAGCGGCTGCAGCGCTGCAGGACCACATCACCCGCTCTCTCTCCGGTTCTGAAGGTCCAAACATCTTTCCAGCAGCACCAAGCAGATCCCATAGAGCCCGGCAGCACAGACACACTGGATTCATACTGGGAGAGGAGCAGGAATACATACTGGAGCCGGAAGCTCCACCCCTCACGCTGGCTCAGAGGTTGGGGTTGGTAGCGGCTCCTGCTGGACGGCTGACGGCGGAGGAGTGGGCGGAGGTGAAGAGCAGATCTCTACAGGAAGGAGACTCCGCCCAGCCCTGCGTCATCTGCACCGAGGAGTTCCGCCTTCAGCCACAAGTTTTGCTCTCCTGTTCCCACGTCTTCCACATGGTGTGTCTGAAGTCTCTGGAGCGGTTCTCGGGACGGAGGTGCTGCCCGCTGTGCCGGAGAGAACCGTACGAGACCCGGGTGATCCATGATGGAGCCAAACTCTACCGAGAGAAATGTGCCGTCAGGATCCAGACCTGCTGGAGAGGCTTTGCTGCCCGTAAATCTTACAGAGCCGTGAGGAAACTCATCCCCCCGAATCACCCGCAGCTACGCCGCAGATACTTCgaagaaaagTTTCAGGAGATAAACGAGAGCTTGGTGAGATCCTGCTGTAGTGATGTTGAGGTGTTCCTGCTGGATGTTGATCAGACTGTAGCAGCCAGCCGAGATGTTTTCCGTCTTTTTGACCAGCAGCAAAAGAGCGTCCTTGAGgaggaaggagaggaagaagagtgGAGGAAGGCTCGGGAGAAGGCTGTTCAGCGAGACATTTCGGACTGTCCGATCTGTCTCACCCCTCTGCACTCGACCAGCAGACAGGTcctcctgctgtcctgctctcATCTCCTCCACGAGTCCTGCCTCCAGGCTTTCGAGCGTTTCTGCCCCGGAGAAACCACCTGCCCCCTGTGCCGCCGCAGATACACCACCAGGCCTGTGCGGGGCGCCAACACATATTCTCCAGAAGATCAGAAATGTAGAATCAACCAAGACGTGTGGTTAACTGTAGCCGAGGATACTAGACACTAATGTTGCTGACAAACAGTGGACTTCATGTGTTCCGGGTGTTAAGTTTGTCCAatccttttaaaaaaacatttcctcttctgaagtccccattgctccaccagccgctcgtgttcagtaaaactgagccggatccctTTTTAGAGGCTTAAATAGCCttattacttaaatattatattagaatTAGCGGGGATGGTggatattttatccatattcttctccactcagaaatgcttctcctttcagtttagaaactaaatttTACAGACTGACGCTTTAATTGGGAACAGATCAGGACTGCAGGCAGtaaaatgtgtgcagcatgtgggtAAGcactgtcttgttgaaaaagCAATGCAACAAGCCTGTAAAAGATGACGACTTTAAGGTAGCACATGTTGAtgttagtgaatatagtaactctgtattgtataGAAATGTTTGGTAACCCggaataaacatgaataaacaccaataaactctaataaaacaaaa

Function

NR:

description
PREDICTED: RING finger protein 32 isoform X2

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022677760.1 True 1652 mRNA 0.51 9 1436940 1449027

Neighbor

gene id symbol gene type direction distance location
rbm33 rbm33 coding upstream 101747 1300585 ~ 1335193 (+)
LOC103046777 NA coding upstream 191171 1241235 ~ 1245769 (+)
insig1 LOC108412812 coding upstream 213111 1217510 ~ 1223829 (+)
htr5a htr5a,htr5ab,LOC103024346,LOC108412811,LOC107684958,LOC107659435,LOC107591053,LOC107742155,LOC107598724 coding upstream 270521 1128077 ~ 1166419 (+)
LOC103047078 NA coding upstream 347429 1084808 ~ 1089511 (+)
LOC111194186 NA coding downstream 40278 1489305 ~ 1491340 (+)
cdc73 cdc73 coding downstream 115903 1564930 ~ 1594076 (+)
LOC111194189 NA coding downstream 177928 1626955 ~ 1638255 (+)
LOC103022771 NA coding downstream 235366 1684393 ~ 1692239 (+)
LOC103022156 NA coding downstream 274508 1723535 ~ 1735903 (+)
G137782 NA non-coding upstream 210423 1101388 ~ 1226517 (+)
G137754 NA non-coding upstream 424945 906454 ~ 1011995 (+)
LOC103021626 NA non-coding upstream 450786 980933 ~ 986154 (+)
G137737 NA non-coding upstream 686530 749841 ~ 750410 (+)
G137729 NA non-coding upstream 782491 654221 ~ 654449 (+)
G137856 NA non-coding downstream 59238 1508265 ~ 1509554 (+)
G137857 NA non-coding downstream 60626 1509653 ~ 1512939 (+)
G137858 dcaf8 non-coding downstream 67452 1516479 ~ 1517928 (+)
G137833 NA non-coding downstream 75685 1524712 ~ 1531923 (+)
G137837 NA non-coding downstream 83162 1532189 ~ 1537281 (+)
mrps14 mrps14 other upstream 396970 1037861 ~ 1039970 (+)
G137756 kiaa0040 other upstream 448302 980980 ~ 988638 (+)
rfwd2 rfwd2,LOC107658354 other upstream 655744 762715 ~ 781196 (+)
G137614 NA other upstream 1342367 93285 ~ 94573 (+)
G137826 LOC108430781,LOC108267757 other downstream 42789 1491816 ~ 1499956 (+)
LOC103042893 vps4b,LOC107727524,LOC107681797,LOC107710065 other downstream 386450 1835477 ~ 1851313 (+)
G137929 NA other downstream 573728 2022755 ~ 2024386 (+)
LOC103045052 cfap57,LOC106594647 other downstream 1451448 2900475 ~ 2936129 (+)
LOC103024858 NA other downstream 1633029 3082056 ~ 3084865 (+)

Expression


Co-expression Network