LOC103022771


Basic Information

Item Value
gene id LOC103022771
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 1684393 ~ 1692239 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022677768.1
TGTTTTTAAAAGTTATCTGCTCTTCTTTTACCAGAAAGACGCCACTGTGCTCTGAGCTGAAGAACAACTCAAATAAAATGAGGATAATTGTGCTCGCGCTGTGTGTTTGGTTGTGTCAGGCCAGTGGAGAATCCTGCAAACGCCCGAAGATCAGTGGAGGCTTTGTAGTCCCCGCGTCAGAGACCTACTCTCATGCTACTAAATTGTCCTACAGCTGCAACCGTGAAATGAAAACCACTCTGGAGACATGGTGGGGGGAGTTATTATGTGATAATGGGAAATGGTCCCCCGTCCCTCTCTGCGTTCCTATAACCAACTGCATTCCCCAAAATATCAAAAACGCCCAACCAATGCCACCAAGAGCGTCCTATTCCGACAGCAGCAATGTTACCTTCGTTTGTAAAAGAGGCTTTAAGGCTGACGGACAAATTGACATGATGGTGACGTGTAATAAGGGGGCGTGGATCAGGCATGCAGAGTGTAAGcGAGATGCGTCTGCATGCAACCCTCCTGCCAAGGTTAATAATGCGATGATCACAAGACCATACCAGGACACGTTTGAACACGGTGACACAGTGGAATTCGTTTGCCAAAATGGCTTCAGGTTGGAGGGAAACAAATCCAGCACATGTCTGAATGGAACATGGTCCAGTCCCCCAATTCAGTGTGttaaattcATGGTGCAGACTCAACCTGaAGGTTCTGCTAATTCCAGAAAACCAACATATGATGAATCAGGAGTTACCCAGGgtGGTTCAGAAGATTCCAGTGACCCATCAAGACCAGCAATTACTCATGTCAGAGAGTGTAAAGCTTACCCCACTATTGAAAATGGAGATTTTATCGAGGAGGCTGGTGGGATGGCCTTAAAAGCTGAGTGTGCTTCATATTACAAACTTGAAGGACCCAAACAAGTAATGTGTGTATCAGGACAGTGGTCGAAGCTGCCTGTTTGTAAAGCTCCATGTTTACTGGATCAGTCACAGTTACTTCGCAGTCAAAGAAGATACTTGATACACGGTGAAGAGGATGAATTTTGGTGCAAGTGGGGTGGATGGGTGAAAGTCAAGTGTGTTGATGGAAGAGCGCAATATGAAGGATgtggttaCTAGgcGAAATGAGAGCCTGAGGCAAATCTCACCATCCCATCCTCGTCTGAAACACACAGTGAGAGCTGCAGAGTGACCGGAGGACCTGCAAATCCTAAAACTCAAACCCTTTTCATCATTACGTTCTCTTTATTCATCCACAATAAAAGCAGAGAACTCAGA

Function

GO:

id name namespace
GO:0019538 protein metabolic process biological_process
GO:0030162 regulation of proteolysis biological_process
GO:0001775 cell activation biological_process
GO:0030168 platelet activation biological_process
GO:1901564 organonitrogen compound metabolic process biological_process
GO:0051246 regulation of protein metabolic process biological_process
GO:0007596 blood coagulation biological_process
GO:0007599 hemostasis biological_process
GO:0006508 proteolysis biological_process
GO:0050817 coagulation biological_process
GO:0008236 serine-type peptidase activity molecular_function
GO:0017171 serine hydrolase activity molecular_function

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection
ko05322 Systemic lupus erythematosus
ko05020 Prion disease

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022677768.1 True 1271 mRNA 0.46 11 1684393 1692239

Neighbor

gene id symbol gene type direction distance location
LOC111194189 NA coding upstream 46138 1626955 ~ 1638255 (+)
cdc73 cdc73 coding upstream 90317 1564930 ~ 1594076 (+)
LOC111194186 NA coding upstream 193053 1489305 ~ 1491340 (+)
rnf32 NA coding upstream 235366 1436940 ~ 1449027 (+)
rbm33 rbm33 coding upstream 349200 1300585 ~ 1335193 (+)
LOC103022156 NA coding downstream 31296 1723535 ~ 1735903 (+)
LOC111194259 NA coding downstream 47932 1740171 ~ 1746238 (+)
tsc22d2 NA coding downstream 84986 1777225 ~ 1802319 (+)
LOC103043726 LOC103043726,LOC105899208 coding downstream 118486 1810725 ~ 1817212 (+)
kdsr kdsr,LOC106569188,LOC102792240 coding downstream 163058 1855297 ~ 1860515 (+)
LOC111194188 NA non-coding upstream 47728 1633487 ~ 1636665 (+)
G137837 NA non-coding upstream 147112 1532189 ~ 1537281 (+)
G137833 NA non-coding upstream 152470 1524712 ~ 1531923 (+)
G137858 dcaf8 non-coding upstream 166465 1516479 ~ 1517928 (+)
G137857 NA non-coding upstream 171454 1509653 ~ 1512939 (+)
G137880 NA non-coding downstream 28503 1720742 ~ 1720954 (+)
G137827 pfn2,pfn2l,LOC107681776 non-coding downstream 69799 1762038 ~ 1770190 (+)
G137890 NA non-coding downstream 112688 1804927 ~ 1806180 (+)
G137889 NA non-coding downstream 115966 1808205 ~ 1809612 (+)
G137898 NA non-coding downstream 186833 1879072 ~ 1879392 (+)
G137826 LOC108430781,LOC108267757 other upstream 184437 1491816 ~ 1499956 (+)
mrps14 mrps14 other upstream 644423 1037861 ~ 1039970 (+)
G137756 kiaa0040 other upstream 695755 980980 ~ 988638 (+)
rfwd2 rfwd2,LOC107658354 other upstream 903197 762715 ~ 781196 (+)
G137614 NA other upstream 1589820 93285 ~ 94573 (+)
LOC103042893 vps4b,LOC107727524,LOC107681797,LOC107710065 other downstream 143238 1835477 ~ 1851313 (+)
G137929 NA other downstream 330516 2022755 ~ 2024386 (+)
LOC103045052 cfap57,LOC106594647 other downstream 1208236 2900475 ~ 2936129 (+)
LOC103024858 NA other downstream 1389817 3082056 ~ 3084865 (+)
LOC103026108 selenot,selt1a,LOC107681817,LOC107708642 other downstream 1423181 3115420 ~ 3119488 (+)

Expression


Co-expression Network