LOC111194259


Basic Information

Item Value
gene id LOC111194259
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 1740171 ~ 1746238 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022677771.1
AGCGGGTCAGGCACCTGGTCACCCTTGCTGAGTAAGAGTTGAAGGTAACAGGGCTTGTTTCACTGCGCCGCTCCTGATGAAGCTCCAGGCTACCTCCGCTGTCCTCAGCCTCCTGCTGGTGGGCTCCTGGGCCCAGGCGCTGCTGCCCAACATCACCCTTCCCACCTGCGACTCTCCGGAGGCCCAGGCCGCCACTCAGGTGGCTCTGGACTACATCAACGCTCAGAACACTCACGGCTACAAGTACGCCCTGAACCAGATCGAGGACATCAAGATCATCACCAGGcCTGATGGAGCACAGACCTATATGTTGGAGCTGGAGTTCTTGGAGACCAAGTGTCACGTTCTAGACCCCACGCCTGCAGCTCAGTGCCCCGTCAGGACCATAGCTGAGACGGCTGTGGAGGCTGACTGTGATGTCGCTCTCTCTAAAACTGCGGGGGTGCTCTCTGTCGTAGCGTTCAAGTGTAAAACTGAAACAGAAACGCCGGACTCTGATTTGGGTCCTTGTGTGGGCTGCTCCTCTCTGATCCCACTAAACGACACTGACGCCGCTCTGCTGGTTCAGGCCTCACTGGATATTTTCAACAAAAATAACACCTTTAATTCAGTGTTCGCACTTTTCGAGGTTGGCCGCCTGTCGTCTcagGTTGTTTCCGGAGGATTGAAACTCTCAGCAGAATACGCCATCATCGAAACTAACTGCACATCTACTGATGACAAAGGCTGTGTCCCTCTGAACCACACTGTTGCTCGCCATGGCTTCTGTTTTTCTGAAGGCATAGGACTCGCCACATCAGTCGACTGTCAAATCTACCTTACCATGGAGCAAATTGTGGATCCAGCTTCCAACATTACTGCTCCTCCTGCACCTCCTCAGGTTCTCCTCCACGCCCACACCGCCGGGCCTGGCCTCAGCCCTGCCATCCACGCCCTCAAACACCACAAACTCACAGCCCTGCACGACCCCTCAGCCAGCGGCTTGCTGTCCGCAGAGTCTGCTGAGTCAGTGGAGGCTCCGGTGGTTGTGGTGCCAGTGGCGCCCGTGGTGCCTGAGGTGCCTGCGGTAGTCGTGGATGTACCCGCCGACGTGTCTGCGGATGTACCCGCCGGCACCGCCCCTGTAGTGAAGAGGGAGGTGGCAGCAGAGGCGGCAACTCCCGCAGCAgaagagaaagcagcagagcCGCTCTTGGCAGCAGGTGTTCCACTGGTTCCCCGCTGCCCGGGAAAAATCATACACTTTTCCACCTAAAAAACACCAtgagatataaaaataataaaaactatgtGTTAAAAA

Function

GO: NA

KEGG:

id description
K23409 AHSG, FETUA; alpha-2-HS-glycoprotein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022677771.1 True 1300 mRNA 0.56 7 1740171 1746238

Neighbor

gene id symbol gene type direction distance location
LOC103022156 NA coding upstream 4268 1723535 ~ 1735903 (+)
LOC103022771 NA coding upstream 47932 1684393 ~ 1692239 (+)
LOC111194189 NA coding upstream 101916 1626955 ~ 1638255 (+)
cdc73 cdc73 coding upstream 146095 1564930 ~ 1594076 (+)
LOC111194186 NA coding upstream 248831 1489305 ~ 1491340 (+)
tsc22d2 NA coding downstream 30987 1777225 ~ 1802319 (+)
LOC103043726 LOC103043726,LOC105899208 coding downstream 64487 1810725 ~ 1817212 (+)
kdsr kdsr,LOC106569188,LOC102792240 coding downstream 109059 1855297 ~ 1860515 (+)
LOC103042278 NA coding downstream 123236 1869474 ~ 1915019 (+)
dpp6 LOC108430761,LOC108267703 coding downstream 355983 2102221 ~ 2230065 (+)
G137880 NA non-coding upstream 19217 1720742 ~ 1720954 (+)
LOC111194188 NA non-coding upstream 103506 1633487 ~ 1636665 (+)
G137837 NA non-coding upstream 202890 1532189 ~ 1537281 (+)
G137833 NA non-coding upstream 208248 1524712 ~ 1531923 (+)
G137858 dcaf8 non-coding upstream 222243 1516479 ~ 1517928 (+)
G137827 pfn2,pfn2l,LOC107681776 non-coding downstream 15800 1762038 ~ 1770190 (+)
G137890 NA non-coding downstream 58689 1804927 ~ 1806180 (+)
G137889 NA non-coding downstream 61967 1808205 ~ 1809612 (+)
G137898 NA non-coding downstream 132834 1879072 ~ 1879392 (+)
G137831 NA non-coding downstream 169909 1916147 ~ 1918411 (+)
G137826 LOC108430781,LOC108267757 other upstream 240215 1491816 ~ 1499956 (+)
mrps14 mrps14 other upstream 700201 1037861 ~ 1039970 (+)
G137756 kiaa0040 other upstream 751533 980980 ~ 988638 (+)
rfwd2 rfwd2,LOC107658354 other upstream 958975 762715 ~ 781196 (+)
G137614 NA other upstream 1645598 93285 ~ 94573 (+)
LOC103042893 vps4b,LOC107727524,LOC107681797,LOC107710065 other downstream 89239 1835477 ~ 1851313 (+)
G137929 NA other downstream 276517 2022755 ~ 2024386 (+)
LOC103045052 cfap57,LOC106594647 other downstream 1154237 2900475 ~ 2936129 (+)
LOC103024858 NA other downstream 1335818 3082056 ~ 3084865 (+)
LOC103026108 selenot,selt1a,LOC107681817,LOC107708642 other downstream 1369182 3115420 ~ 3119488 (+)

Expression


Co-expression Network