LOC103044744


Basic Information

Item Value
gene id LOC103044744
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 2747818 ~ 2763344 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022677813.1
AATAACACTGCTTATGTTTTCAAAGAATTTTAATTCACGTCTGAAGCTCTTTCCCTCACGCTCGCTGAGATCCAGAGGTCCAGAGTCGGCCGGGGGAGGCAGGAGAAGGTCGATGCatggtggtgctgctgctggagGTGTTGAACGAGGAACGTCgagaagaataaagttaataaaaccAATGACTGAACCCTATAAACAATGGATGCACAAAAAGTAAATGGTGTGGCTCCAAAAGAGAATGGTCATGGAAGTCGTGGAAGACCACCCTGCTATTCTGTTGAGACTCCATACGGATTTCATTTGGATTTGGACTTTCTTAAGTACGTTGATGACATTGAAAAGGGCAACACCATCAAGAGAGTGCCAATCCAGCGTAGACAACGTGGGCGAACAACTGGTTCCCTATCCAGAAATCTCAGCCTACCTGGGTATGGGTGCAGCAGGCCCTCCCAGTGGAACTCTACTGGTATTTTATTTCCCAGACCTAGACTCGCAGACTCGCAGCAAAGTTACGGAAATACAGCGTTTCAGTCTTCCGATGGTGGTTCAACTGCTTTAGTCAGGCAGGTAGAGCCTTCCTACAGTTCCTTCACAGCCGCAGAAATGGACGCCACCATTCAGGCCTTCGACGAGCAGCCCTTAGGACTTCACGTAAGGCCGAATTTACTTCGTGCCTCGAGTTTACCACTCACAGTGTTACTGAGGAAACGTTCAGAATCCATCGAAGACCCAACCAGCCCCAACGGTTCAAGGGATTACCTCACGCAAGAAAACGGATCTTCCGAGGACGTCTTCCACAGCCCGGAGAGAAAGACGGCAGGGGCGAACGGGACTCTTCAACGGCTCACTGCAGCCTTACAGCGAACggcagagctggaggaggagatcAGGGTTATACCAGAGCTCAAAGCCCAAATATGCATCCTGCAAGAGGAGCGGGAAATGCTCTTGTACAAATTCCAAACCCAAATTTCACCAAGTACCAAAGAACCAGTGGACTTTTCTAGCGGTTCGCCACAGAGCTCAAGCCATTTCACCAGTTCAGCCGTGGTTTCAAAGACCGCGGAGATTCAAAACAAAGCAAACGACGACTGGATGAATCGAGAGTACGATCAACTGGAAGAGAACGTCAAGGCTTCTTCCGAGCAAGTGGACGCAATTGTGATTCCCTTTACCACAGGAACAGGTAGAAATCTGCAAGGAACTAAAACTTCCAGAGATAACAAAGATCTTTCAGATCACGGAGACAGATCTAAGTCTCTCACGGAGACTCTGCAGAGGAAAGTTGTCACGCTGGAGCAGAAACTCCATGAACTCGAGTCCGACCTGGACAAGACGAGAGATCAGCTgaagcagcaggtgctggagagCCGAATAAAAGACGAGAGAATCAAGGAGCTGAACAAAAACGTTGAACGCAATAGTGCTGAAAACGTCTGGGTCAGAGCTGAAGGAACTGAAGAGCATTCACCTGAGAACAAAACGTCAGAGCACGCAAAAGTACGGAAACCTGAAGCTTCCGTTCAGGTTCAGGAATCAGGTCAGTGTGGTTTAGAAGAAGGACTCAAACCCCATCATGCTTCAAAAGCACCTGCAAAATCTCACGCAGAGATGGAGCATCACgtgaaaagagtgaaagagctCCTGCATGAACAATGGGAATGCCTCTGCAGGAAAGAGTCGTCTGGAAGGGTCTTGTCTTCTGAACACCTGCCTCCTCGTGTCTGCTCCATCCAAGAACAGCTGGTCACTTTAGTGAGCCTACTGTCGCTTTATGTGTCTCCTGCTGGAGAGCTGCAAGCGCAACAACCAGCACAAACGTCCAAGCTGGAGGACCCGATATCTGTGTTACATAAGTCCAGGGTGGAAAGTCCCGTGCAAGTTGATGCAAGAGAGAGGTCTGGTGATGGAAGTGATGCAGTGGAGTATAGCACACAACCAGCGGAGCTTCCTGAAGAGGAGTCTGACCTTAAGACGTTCCCACCTGATCAGATAATAGAGAGTATAGTGtttattaaagaacagaaaaccAGAGAAGAAGATCCTACAGAAGAGACGACtcgagaagaagaagaagaagccatGAAGCAGGAACCAAGGCAAACATGTGAAGCTGAATGTCCAGATGGTCCACCAGTGAAAGATGAGAGCGAGCAGGTCGAAACATGTTCAGGAGTTGAGACACAGGAGCTTTCAGAGGACGGAAGAGGGGAGACAGAGATCAACAAAGACTTCACGGCTGCGTGTTACTTCCTAGAAAACCACATGAACGAAGTGTCTGACCCAAACGATGACATGAGGCAGGCTCTCACCGTGGTGTTCCAGCAGTGGTTCCACATCTCTGCTGAGGAAGACTCTTGTGCAGACACTGTTTCCCTGTATGTAAATGAGGTGTCCAAATACACTCCTGCAGTCCTTCCATTCCTGGTCAACATGGTGGATGACAATGGGAACACAGCCCTGCATTACAGCGTGTCCCACTCTAACTTCAGGATCGCCAAGATTCTGTTAGACACAGgtgtgtgtgaggtggataAGAGGAATAAGATCGGATACACAGCCATGATGCTGGCCTGTCTCGTACCTGTGGATTCTCCAGTGGAGATGAAGGCAATTCAACAGCTGATGAAGCTTTCTGATGTTAATGCTCGAGCGGGCCAGGTGGGTCAGACGGCTCTTCACCTGGCGGTCAGGCACGGCCGGGTCTCCACAGTGCAGCTGCTTCTGGCACAGGGGGCTAATATTAACGCTCAGGACCGGGCGGGCACCACCGCCCTGATCAGCGCCTGCGACCGCGGGCACGCCGACATCGTCCGGATCCTGCTGGAGGACCCCGACTGTGACGTCAACCTCACAGATAAGGGAGGACGCAGTGCTCTCTCATTGGCCACACAGGCGTCTCACACAGAAATAGCCGACCTGCTGAGGGCCCGAGCCGGAACCCGAGGGCCCGACAGGTGCAAGATGTCCTGAGGAGAGCGTTCAGTTCGTCCTGGAGATCTGATCatcacatttacattaatgtaTTTCTCTCTGCATGCAGAAACCCTCACTGATAACAGCTACAGTCTGAGCTTCAGCAGGTCCCGGGTCAGTTATTATAgctattattgtttattgttataattacaggctttattacagtaatatctGTGTTATAGAAGCTATCAGACGCCTCTTTCTGCAGACTCAGGCTGATGAAAAGCagcactataataataataacatgtaATCACATTCTGAGTCTGGAACCGAGTTCTAATGTGCTTCTGAATCAATAAGCCGGAGCTAAATTTAATCTCTTTTATGCATTATGATAATGAAGCTCATTTTGCACAATACAGGAAGTCCTTCCTCTGC
>XM_022677814.1
agtgatagtgatagtgataatGATAGTGATAATGATAATAGTGATGATGTCTTGTTGGACTTTTTGGTTTTAGACTAGTTAAACTAAAGTAAACTGGATTAAAAAGTTTCTGCATGAAGATTCTGCAAACACTGAGCATCACATCAAGGTGTTGAACGAGGAACGTCgagaagaataaagttaataaaaccAATGACTGAACCCTATAAACAATGGATGCACAAAAAGTAAATGGTGTGGCTCCAAAAGAGAATGGTCATGGAAGTCGTGGAAGACCACCCTGCTATTCTGTTGAGACTCCATACGGATTTCATTTGGATTTGGACTTTCTTAAGTACGTTGATGACATTGAAAAGGGCAACACCATCAAGAGAGTGCCAATCCAGCGTAGACAACGTGGGCGAACAACTGGTTCCCTATCCAGAAATCTCAGCCTACCTGGGTATGGGTGCAGCAGGCCCTCCCAGTGGAACTCTACTGGTATTTTATTTCCCAGACCTAGACTCGCAGACTCGCAGCAAAGTTACGGAAATACAGCGTTTCAGTCTTCCGATGGTGGTTCAACTGCTTTAGTCAGGCAGGTAGAGCCTTCCTACAGTTCCTTCACAGCCGCAGAAATGGACGCCACCATTCAGGCCTTCGACGAGCAGCCCTTAGGACTTCACGTAAGGCCGAATTTACTTCGTGCCTCGAGTTTACCACTCACAGTGTTACTGAGGAAACGTTCAGAATCCATCGAAGACCCAACCAGCCCCAACGGTTCAAGGGATTACCTCACGCAAGAAAACGGATCTTCCGAGGACGTCTTCCACAGCCCGGAGAGAAAGACGGCAGGGGCGAACGGGACTCTTCAACGGCTCACTGCAGCCTTACAGCGAACggcagagctggaggaggagatcAGGGTTATACCAGAGCTCAAAGCCCAAATATGCATCCTGCAAGAGGAGCGGGAAATGCTCTTGTACAAATTCCAAACCCAAATTTCACCAAGTACCAAAGAACCAGTGGACTTTTCTAGCGGTTCGCCACAGAGCTCAAGCCATTTCACCAGTTCAGCCGTGGTTTCAAAGACCGCGGAGATTCAAAACAAAGCAAACGACGACTGGATGAATCGAGAGTACGATCAACTGGAAGAGAACGTCAAGGCTTCTTCCGAGCAAGTGGACGCAATTGTGATTCCCTTTACCACAGGAACAGGTAGAAATCTGCAAGGAACTAAAACTTCCAGAGATAACAAAGATCTTTCAGATCACGGAGACAGATCTAAGTCTCTCACGGAGACTCTGCAGAGGAAAGTTGTCACGCTGGAGCAGAAACTCCATGAACTCGAGTCCGACCTGGACAAGACGAGAGATCAGCTgaagcagcaggtgctggagagCCGAATAAAAGACGAGAGAATCAAGGAGCTGAACAAAAACGTTGAACGCAATAGTGCTGAAAACGTCTGGGTCAGAGCTGAAGGAACTGAAGAGCATTCACCTGAGAACAAAACGTCAGAGCACGCAAAAGTACGGAAACCTGAAGCTTCCGTTCAGGTTCAGGAATCAGGTCAGTGTGGTTTAGAAGAAGGACTCAAACCCCATCATGCTTCAAAAGCACCTGCAAAATCTCACGCAGAGATGGAGCATCACgtgaaaagagtgaaagagctCCTGCATGAACAATGGGAATGCCTCTGCAGGAAAGAGTCGTCTGGAAGGGTCTTGTCTTCTGAACACCTGCCTCCTCGTGTCTGCTCCATCCAAGAACAGCTGGTCACTTTAGTGAGCCTACTGTCGCTTTATGTGTCTCCTGCTGGAGAGCTGCAAGCGCAACAACCAGCACAAACGTCCAAGCTGGAGGACCCGATATCTGTGTTACATAAGTCCAGGGTGGAAAGTCCCGTGCAAGTTGATGCAAGAGAGAGGTCTGGTGATGGAAGTGATGCAGTGGAGTATAGCACACAACCAGCGGAGCTTCCTGAAGAGGAGTCTGACCTTAAGACGTTCCCACCTGATCAGATAATAGAGAGTATAGTGtttattaaagaacagaaaaccAGAGAAGAAGATCCTACAGAAGAGACGACtcgagaagaagaagaagaagccatGAAGCAGGAACCAAGGCAAACATGTGAAGCTGAATGTCCAGATGGTCCACCAGTGAAAGATGAGAGCGAGCAGGTCGAAACATGTTCAGGAGTTGAGACACAGGAGCTTTCAGAGGACGGAAGAGGGGAGACAGAGATCAACAAAGACTTCACGGCTGCGTGTTACTTCCTAGAAAACCACATGAACGAAGTGTCTGACCCAAACGATGACATGAGGCAGGCTCTCACCGTGGTGTTCCAGCAGTGGTTCCACATCTCTGCTGAGGAAGACTCTTGTGCAGACACTGTTTCCCTGTATGTAAATGAGGTGTCCAAATACACTCCTGCAGTCCTTCCATTCCTGGTCAACATGGTGGATGACAATGGGAACACAGCCCTGCATTACAGCGTGTCCCACTCTAACTTCAGGATCGCCAAGATTCTGTTAGACACAGgtgtgtgtgaggtggataAGAGGAATAAGATCGGATACACAGCCATGATGCTGGCCTGTCTCGTACCTGTGGATTCTCCAGTGGAGATGAAGGCAATTCAACAGCTGATGAAGCTTTCTGATGTTAATGCTCGAGCGGGCCAGGTGGGTCAGACGGCTCTTCACCTGGCGGTCAGGCACGGCCGGGTCTCCACAGTGCAGCTGCTTCTGGCACAGGGGGCTAATATTAACGCTCAGGACCGGGCGGGCACCACCGCCCTGATCAGCGCCTGCGACCGCGGGCACGCCGACATCGTCCGGATCCTGCTGGAGGACCCCGACTGTGACGTCAACCTCACAGATAAGGGAGGACGCAGTGCTCTCTCATTGGCCACACAGGCGTCTCACACAGAAATAGCCGACCTGCTGAGGGCCCGAGCCGGAACCCGAGGGCCCGACAGGTGCAAGATGTCCTGAGGAGAGCGTTCAGTTCGTCCTGGAGATCTGATCatcacatttacattaatgtaTTTCTCTCTGCATGCAGAAACCCTCACTGATAACAGCTACAGTCTGAGCTTCAGCAGGTCCCGGGTCAGTTATTATAgctattattgtttattgttataattacaggctttattacagtaatatctGTGTTATAGAAGCTATCAGACGCCTCTTTCTGCAGACTCAGGCTGATGAAAAGCagcactataataataataacatgtaATCACATTCTGAGTCTGGAACCGAGTTCTAATGTGCTTCTGAATCAATAAGCCGGAGCTAAATTTAATCTCTTTTATGCATTATGATAATGAAGCTCATTTTGCACAATACAGGAAGTCCTTCCTCTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022677813.1 False 3363 mRNA 0.49 10 2747818 2763344
XM_022677814.1 True 3374 mRNA 0.48 10 2747964 2763344

Neighbor

gene id symbol gene type direction distance location
LOC103044144 LOC108430743 coding upstream 36102 2689286 ~ 2711716 (+)
LOC103044323 LOC108430700 coding upstream 154127 2589517 ~ 2593691 (+)
LOC111194265 NA coding upstream 183771 2562135 ~ 2564047 (+)
cmpk1 cmpk1,cmpk,LOC107719256,LOC107681787,LOC107671754,LOC107709354,LOC107559368 coding upstream 217655 2522508 ~ 2530163 (+)
LOC103042800 NA coding upstream 240691 2493964 ~ 2507127 (+)
LOC111194192 NA coding downstream 157375 2920719 ~ 2922118 (+)
slc1a7 slc1a7,slc1a7a,LOC107722044,LOC107671767,LOC107681716,LOC107593788 coding downstream 179792 2943136 ~ 2978445 (+)
aldh9a1 aldh9a1,LOC108430735,LOC108267615,LOC107681718,LOC107593789,LOC105891333 coding downstream 254236 3017580 ~ 3025513 (+)
LOC103024543 fzr1b,LOC108430732,LOC108268046,LOC107719268,LOC107701330,LOC107722096 coding downstream 275075 3038419 ~ 3049776 (+)
LOC103024237 NA coding downstream 300583 3063927 ~ 3069951 (+)
G138045 NA non-coding upstream 7051 2709396 ~ 2740767 (+)
G138043 NA non-coding upstream 14800 2656202 ~ 2733018 (+)
G138029 NA non-coding upstream 34360 2654976 ~ 2713458 (+)
G138026 NA non-coding upstream 138776 2607980 ~ 2609042 (+)
G138015 NA non-coding upstream 168938 2568039 ~ 2578880 (+)
G138058 lrp8 non-coding downstream 1976 2765320 ~ 2768924 (+)
G138073 NA non-coding downstream 84213 2847557 ~ 2849112 (+)
G138074 NA non-coding downstream 99618 2862962 ~ 2863288 (+)
G138078 NA non-coding downstream 129299 2892643 ~ 2895410 (+)
G138080 NA non-coding downstream 134186 2897530 ~ 2899531 (+)
G137929 NA other upstream 723432 2022755 ~ 2024386 (+)
LOC103042893 vps4b,LOC107727524,LOC107681797,LOC107710065 other upstream 896505 1835477 ~ 1851313 (+)
G137826 LOC108430781,LOC108267757 other upstream 1247862 1491816 ~ 1499956 (+)
mrps14 mrps14 other upstream 1707848 1037861 ~ 1039970 (+)
G137756 kiaa0040 other upstream 1759180 980980 ~ 988638 (+)
LOC103045052 cfap57,LOC106594647 other downstream 137131 2900475 ~ 2936129 (+)
LOC103024858 NA other downstream 318712 3082056 ~ 3084865 (+)
LOC103026108 selenot,selt1a,LOC107681817,LOC107708642 other downstream 352076 3115420 ~ 3119488 (+)
LOC103047488 pls1,LOC108437523,LOC107722705,LOC107656864,LOC107565818,LOC107599860,LOC107709028,LOC107681752 other downstream 1038509 3801853 ~ 3839372 (+)
G138701 NA other downstream 1069911 3833255 ~ 3834460 (+)

Expression


Co-expression Network