ak5 (ak5,LOC107703241,LOC107599844,LOC107681791)


Basic Information

Item Value
gene id ak5
gene name ak5,LOC107703241,LOC107599844,LOC107681791
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 3417426 ~ 3477561 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022677833.1
GGGTGGTAAAAGAAGGAACGCTGTGGACGGCTGTCAACTTGCCGCTGAGTGGAGGGGCTGGAGGGGAGTAGGATGTCACTGCACGGTTTTCTCTCTGAGAGGATATAATCTTCTGTTTGTGGGGCTGCAGATCGCCAGTTTAAGACCACAATGAACACCAACGACGCCAAGGAGTATCTCTCCCGGAGGGAAATACCACAGCTGTTTGAGAGTTTGCTGACAGGTTTGATGTACTACCGTCCAGATGATCCTATAGACTACCTGGAATGCTGTTTGAAGAAGGTCAGGGAACTGGGAGGGACAGAAAAAGTCCGGTGGGACACCTTTGTGGGACAGGAGAAGAAGTCCTTGCCCCCACTCAATGGTGGTCAATCTCGACGGTCTTTTTTCAGAAACGTTTTGCCAGACAGTCCCAACTTCCCCTACCGAAGGTATGACCGCCTTCCGCCCATCCATCAGTTCTCCATAGAGAGTGACTCAGACCTGTCTGAAACAGCTGAGCTGATCGAGGAGTACGAAGTTTTCGACCCCTCCAGACCACGGCCCAAAGTCATCCTCATCATTGGTGGCCCAGGCAGCGGAAAAGGAACGCAAAGCCTGAAGATTGCAGAGCGCTATGGCTTTGAGTACGTCTCAGTAGGGGAACTACTAAGAAAAAGGATGATCCACAATGCCACCAGCAACAGGAAATGGAGTCTGATCGCCAAGATCATCACTAATGGGGAGCTGGCTCCACAGGAGACAACCATCACTGAGATCAAGCAGAAGATCATGAAGATACCAGATGCGAATGGGATAGTCATAGACGGCTTCCCGCGGGATGTGGGCCAGGCGCTTTCATTTGAAGATCAGATTTGTACTCCAGATCTGGTGGTCTTTCTTGCGTGTTCCAATCAACGCCTAAAGGAGCGTCTAGAGAAGCGAGCAGAACAGCAGGGTCGCCCTGACGACAACCCCAAGGCAACAGAGCGACGGCTCGCCAACTTCAAGCAGAACGCTGTGCCACTGGTGAAATACTTCCAGGAGAAGGGGCTAATCGTCACACTTGATGCCGATCGAGACGAGGAAGAAGTTTTCTATGACATCAGCATGACGGTTGACAACAAACTGTTCCCCACCAAAGAACCTGTTGCAGGTCCCAGTGAGCTGGATCTGAGTCTGCTAGGAGATAACACTAGTGTGGCAGATGTTCCCTGTAAATTCGAAGAGCAGGCAGCTGAAGAAGTGGGATTCACAGAGCAGAGTGAAGAAAGTTTTTCCGTGGAGAAGAAGAAACCAAAGGTCATCTTTGTGATTGGTGGTCCCGGCTCAGGGAAGGCCCTGCAGTGTGAGAAGATCGAGGAGCAGTACGGATTAAAGCGCCTGTGTCCCAGAGACATCCTGTGCAGTGAGCTGCAGTCCCACAGTGAGAGGGGACGCTTCTTCAGAGACGTCCTCGAGAGGGGAGAACAGCTTCCTGAGgatacACTGTTGGATCTCCTGTGCGAGTCTATGGAGTCTACAGTGCGGCATGGAAAAGGCTTCCTGGTCAGCGGATTCCCACGGGACCTGAGGCAGGCAGAGGAGTACGAGGCcaagatggGAAAGCCATGCGTGGTTCTGCTATTGGAGTGCTGTTCAGACACTATGAGCCGACGTCTTCAGCAGAGGACCTGCTCCAGCCTGCGCTCGAGAGAGGCACGGGACAGAGACGCCCACCGCAGAGTCGACAGCTTCTGCAGCACCATCACACCCGTCATCCATCACTATGAACACAAAGGCGTCCTGCACAAGatTGATGCGGAACAGCCCCCTGACGAGGTGTTTGAACAGATCTGCCTGGCCCTGGACTCTTGCTAAGGACTGGAACCACACAACTGCCCCCTGCTGGATCAATCCATCATTATACAGACATCATtacagatcacacacacacacacacacaccacaccagcCATCGTCCACTGCCATCCAGAGCCGTCTGCAAAGGCAGGACGAGGACACCTGCCAGCAGCTTGTGACTTCTCTCAATGTGTGCCACTCTTCTTCCCTGCTGTACATAGCAGCTCAACAAAGACCGCCTGCAGAGACACgtaccacacactcacacactcacacacgcaaacacacacacacactcacacacacctgcctGCTTGTTGTTTAAAGAACACACTCGCCTCGCTTCAACAAAGTGCTTCAGCTCCATCCAGTGTGGAGACTCATCCTACTGTTCTGCTGATCTCGGACTGCACGGCCCCAACCCAGCGCTGCATTTACATTATTGCTGAGCAGAGGTTCTCATTGTTTTTGCTTtctattaatattgttttatggAGACAGGTGGCAGGCGGGCAGAGAGACAGGCAGGCAGGGAGACAGGAAGGACAGTGCAAATAATTGGGAACATCTGGGAATATCTGAAAGATGCAGAGAGTCAAGAAAtctcctaaaataaaaaaactaaataattgtTCAAACAGTGGAAACGGTAGTAAGAGCTTGAAAAAattttgccaatttttttttacat

Function

symbol description
ak5 Predicted to enable nucleoside diphosphate kinase activity. Acts upstream of or within cilium assembly. Predicted to be active in cytosol. Orthologous to human AK5 (adenylate kinase 5).

NR:

description
PREDICTED: adenylate kinase isoenzyme 5

GO:

id name namespace
GO:0006139 nucleobase-containing compound metabolic process biological_process
GO:0016310 phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0019205 nucleobase-containing compound kinase activity molecular_function

KEGG:

id description
K00939 adk, AK; adenylate kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022677833.1 True 2512 mRNA 0.51 15 3417426 3477561

Neighbor

gene id symbol gene type direction distance location
st6galnac5 st6galnac5,st6galnac5a,LOC107708707,LOC107681827,LOC107599846 coding upstream 55792 3311161 ~ 3361634 (+)
st6galnac3 st6galnac3,LOC107599847,LOC107681790,LOC107558185 coding upstream 127733 3210560 ~ 3289693 (+)
cope cope,LOC107690966 coding upstream 217341 3194548 ~ 3200085 (+)
LOC103046575 LOC108430689 coding upstream 223871 3187732 ~ 3193555 (+)
txndc12 txndc12,LOC107690994,LOC107566463,LOC107708672 coding upstream 261372 3150876 ~ 3156054 (+)
miga1 miga1,LOC107558173 coding downstream 58856 3536417 ~ 3552555 (+)
fubp1 fubp1 coding downstream 77368 3554929 ~ 3568678 (+)
LOC103030036 LOC103030036,LOC108437507,LOC107681832,LOC107709017 coding downstream 93582 3571143 ~ 3581126 (+)
LOC103030773 LOC103030773,LOC108437505,LOC108267627,LOC107558181 coding downstream 107588 3585149 ~ 3598602 (+)
LOC103031935 ephb3a,LOC108437521,LOC108267069,LOC107656865,LOC107599837,LOC107681809,LOC107708817,LOC105889460 coding downstream 423593 3901154 ~ 3942480 (+)
G138534 NA non-coding upstream 121044 3256901 ~ 3296382 (+)
G138524 gipc2,LOC108430720 non-coding upstream 242062 3156756 ~ 3175364 (+)
G138123 NA non-coding upstream 302811 3110402 ~ 3114615 (+)
G138092 NA non-coding upstream 420349 2996554 ~ 2997077 (+)
G138080 NA non-coding upstream 517895 2897530 ~ 2899531 (+)
G138598 NA non-coding downstream 15135 3492696 ~ 3494363 (+)
G138593 NA non-coding downstream 27015 3504576 ~ 3506945 (+)
G138609 NA non-coding downstream 47070 3524631 ~ 3526308 (+)
G138642 NA non-coding downstream 106457 3584018 ~ 3584290 (+)
G138647 NA non-coding downstream 124294 3601855 ~ 3602193 (+)
LOC103026108 selenot,selt1a,LOC107681817,LOC107708642 other upstream 297938 3115420 ~ 3119488 (+)
LOC103024858 NA other upstream 332561 3082056 ~ 3084865 (+)
LOC103045052 cfap57,LOC106594647 other upstream 481297 2900475 ~ 2936129 (+)
G137929 NA other upstream 1393040 2022755 ~ 2024386 (+)
LOC103042893 vps4b,LOC107727524,LOC107681797,LOC107710065 other upstream 1566113 1835477 ~ 1851313 (+)
LOC103047488 pls1,LOC108437523,LOC107722705,LOC107656864,LOC107565818,LOC107599860,LOC107709028,LOC107681752 other downstream 324292 3801853 ~ 3839372 (+)
G138701 NA other downstream 355694 3833255 ~ 3834460 (+)
LOC111194271 NA other downstream 618436 4095997 ~ 4102241 (+)
LOC103023077 NA other downstream 688382 4165943 ~ 4172010 (+)
G138839 NA other downstream 760048 4237609 ~ 4245864 (+)

Expression


Co-expression Network